RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 RRP7BPQ9NSQ0 103 aa25.95■■□□□ 1.74
SF3B2-209ENST00000530322 CHIC2Q9UKJ5 165 aa25.95■■□□□ 1.74
SF3B2-209ENST00000530322 PREX1Q8TCU6 1659 aa25.94■■□□□ 1.74
SF3B2-209ENST00000530322 ANKRD30AQ9BXX3 1397 aa25.94■■□□□ 1.74
SF3B2-209ENST00000530322 FAM135AQ9P2D6 1515 aa25.93■■□□□ 1.74
SF3B2-209ENST00000530322 ADGRL2O95490 1459 aa25.93■■□□□ 1.74
SF3B2-209ENST00000530322 NCOA1Q15788 1441 aa25.92■■□□□ 1.74
SF3B2-209ENST00000530322 ERBINQ96RT1 1412 aa25.91■■□□□ 1.74
SF3B2-209ENST00000530322 KDM5DQ9BY66 1539 aa25.91■■□□□ 1.74
SF3B2-209ENST00000530322 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.9■■□□□ 1.74
SF3B2-209ENST00000530322 MROH1Q8NDA8 1641 aa25.89■■□□□ 1.74
SF3B2-209ENST00000530322 NPATQ14207 1427 aa25.88■■□□□ 1.73
SF3B2-209ENST00000530322 PTPRKQ15262 1439 aa25.88■■□□□ 1.73
SF3B2-209ENST00000530322 WASHC2CQ9Y4E1 1318 aa25.86■■□□□ 1.73
SF3B2-209ENST00000530322 UHRF1BP1Q6BDS2 1440 aa25.85■■□□□ 1.73
SF3B2-209ENST00000530322 RRBP1Q9P2E9 1410 aaKnown RBP25.84■■□□□ 1.73
SF3B2-209ENST00000530322 ZC3H13Q5T200 1668 aaKnown RBP25.83■■□□□ 1.73
SF3B2-209ENST00000530322 HSPA2P54652 639 aa25.83■■□□□ 1.73
SF3B2-209ENST00000530322 DEPDC5O75140 1603 aa25.82■■□□□ 1.72
SF3B2-209ENST00000530322 ABCC3O15438 1527 aa25.82■■□□□ 1.72
SF3B2-209ENST00000530322 PRDM15P57071 1507 aaPredicted RBP25.82■■□□□ 1.72
SF3B2-209ENST00000530322 PZPP20742 1482 aa25.8■■□□□ 1.72
SF3B2-209ENST00000530322 CEP152O94986 1710 aa25.8■■□□□ 1.72
SF3B2-209ENST00000530322 ROCK1Q13464 1354 aa25.79■■□□□ 1.72
SF3B2-209ENST00000530322 ITGAEP38570 1179 aa25.76■■□□□ 1.71
SF3B2-209ENST00000530322 ANKRD50Q9ULJ7 1429 aa25.76■■□□□ 1.71
SF3B2-209ENST00000530322 MYO3AQ8NEV4 1616 aa25.76■■□□□ 1.71
SF3B2-209ENST00000530322 CAMSAP1Q5T5Y3 1602 aa25.74■■□□□ 1.71
SF3B2-209ENST00000530322 FBXO31Q5XUX0 539 aaPredicted RBP25.74■■□□□ 1.71
SF3B2-209ENST00000530322 ZNF142P52746 1687 aaPredicted RBP25.73■■□□□ 1.71
SF3B2-209ENST00000530322 VWDEQ8N2E2 1590 aa25.72■■□□□ 1.71
SF3B2-209ENST00000530322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.71■■□□□ 1.717e-14■■■□□ 14.6
SF3B2-209ENST00000530322 KANK1Q14678 1352 aa25.69■■□□□ 1.7
SF3B2-209ENST00000530322 CEP170BQ9Y4F5 1589 aaPredicted RBP25.69■■□□□ 1.7
SF3B2-209ENST00000530322 TNRQ92752 1358 aa25.69■■□□□ 1.7
SF3B2-209ENST00000530322 STRCQ7RTU9 1775 aa25.67■■□□□ 1.7
SF3B2-209ENST00000530322 ARHGAP31Q2M1Z3 1444 aa25.67■■□□□ 1.7
SF3B2-209ENST00000530322 LMTK2Q8IWU2 1503 aa25.67■■□□□ 1.7
SF3B2-209ENST00000530322 CFAP65Q6ZU64 1925 aaKnown RBP25.67■■□□□ 1.7
SF3B2-209ENST00000530322 SPATA31D1Q6ZQQ2 1576 aa25.66■■□□□ 1.7
SF3B2-209ENST00000530322 ERVK-7P63135 1459 aa25.65■■□□□ 1.7
SF3B2-209ENST00000530322 A2ML1A8K2U0 1454 aa25.64■■□□□ 1.69
SF3B2-209ENST00000530322 UNC13BO14795 1591 aa25.64■■□□□ 1.69
SF3B2-209ENST00000530322 NLRP1Q9C000 1473 aa25.6■■□□□ 1.69
SF3B2-209ENST00000530322 EFCAB6Q5THR3 1501 aa25.58■■□□□ 1.69
SF3B2-209ENST00000530322 PLA2R1Q13018 1463 aa25.56■■□□□ 1.68
SF3B2-209ENST00000530322 TET3O43151 1660 aa25.55■■□□□ 1.68
SF3B2-209ENST00000530322 GCC2Q8IWJ2 1684 aa25.55■■□□□ 1.68
SF3B2-209ENST00000530322 NAIPQ13075 1403 aa25.54■■□□□ 1.68
SF3B2-209ENST00000530322 IQGAP3Q86VI3 1631 aa25.53■■□□□ 1.68
SF3B2-209ENST00000530322 UGGT1Q9NYU2 1555 aa25.52■■□□□ 1.68
SF3B2-209ENST00000530322 DMRT2Q9Y5R5 561 aa25.52■■□□□ 1.68
SF3B2-209ENST00000530322 HFM1A2PYH4 1435 aa25.51■■□□□ 1.67
SF3B2-209ENST00000530322 PTPRTO14522 1441 aa25.5■■□□□ 1.67
SF3B2-209ENST00000530322 RPRD2Q5VT52 1461 aaKnown RBP25.5■■□□□ 1.67
SF3B2-209ENST00000530322 NOS1P29475 1434 aa25.49■■□□□ 1.67
SF3B2-209ENST00000530322 NUP155O75694 1391 aa25.48■■□□□ 1.67
SF3B2-209ENST00000530322 NCKAP5LQ9HCH0 1330 aa25.48■■□□□ 1.67
SF3B2-209ENST00000530322 SYNMO15061 1565 aa25.48■■□□□ 1.67
SF3B2-209ENST00000530322 UBR1Q8IWV7 1749 aa25.47■■□□□ 1.67
SF3B2-209ENST00000530322 PKD2Q13563 968 aa25.47■■□□□ 1.67
SF3B2-209ENST00000530322 E9PCH4 1651 aa25.46■■□□□ 1.67
SF3B2-209ENST00000530322 THEMISQ8N1K5 641 aaPredicted RBP25.46■■□□□ 1.67
SF3B2-209ENST00000530322 POLR1AO95602 1720 aaPredicted RBP25.45■■□□□ 1.66
SF3B2-209ENST00000530322 PIK3C2BO00750 1634 aa25.44■■□□□ 1.66
SF3B2-209ENST00000530322 NEURL4Q96JN8 1562 aa25.39■■□□□ 1.66
SF3B2-209ENST00000530322 KDM5AP29375 1690 aaKnown RBP25.39■■□□□ 1.66
SF3B2-209ENST00000530322 IDI1Q13907 227 aa25.39■■□□□ 1.66
SF3B2-209ENST00000530322 ANKLE2Q86XL3 938 aa25.38■■□□□ 1.65
SF3B2-209ENST00000530322 SLC52A1Q9NWF4 448 aa25.36■■□□□ 1.65
SF3B2-209ENST00000530322 ARHGAP23Q9P227 1491 aa25.34■■□□□ 1.65
SF3B2-209ENST00000530322 SLIT1O75093 1534 aa25.34■■□□□ 1.65
SF3B2-209ENST00000530322 MED14O60244 1454 aa25.34■■□□□ 1.65
SF3B2-209ENST00000530322 ADGRB3O60242 1522 aa25.32■■□□□ 1.64
SF3B2-209ENST00000530322 STAG3Q9UJ98 1225 aa25.31■■□□□ 1.64
SF3B2-209ENST00000530322 TRIM52Q96A61 297 aa25.3■■□□□ 1.64
SF3B2-209ENST00000530322 NPHP4O75161 1426 aaPredicted RBP25.29■■□□□ 1.64
SF3B2-209ENST00000530322 SPHKAPQ2M3C7 1700 aa25.29■■□□□ 1.64
SF3B2-209ENST00000530322 IQGAP1P46940 1657 aa25.29■■□□□ 1.64
SF3B2-209ENST00000530322 TMEM2Q9UHN6 1383 aa25.29■■□□□ 1.64
SF3B2-209ENST00000530322 SCAF11Q99590 1463 aaKnown RBP25.28■■□□□ 1.64
SF3B2-209ENST00000530322 MYO5BQ9ULV0 1848 aa25.28■■□□□ 1.64
SF3B2-209ENST00000530322 LTBP4Q8N2S1 1624 aa25.28■■□□□ 1.64
SF3B2-209ENST00000530322 TMEM131LA2VDJ0 1609 aa25.27■■□□□ 1.64
SF3B2-209ENST00000530322 LTKP29376 864 aa25.26■■□□□ 1.63
SF3B2-209ENST00000530322 CERKQ8TCT0 537 aa25.26■■□□□ 1.63
SF3B2-209ENST00000530322 SETD5Q9C0A6 1442 aa25.24■■□□□ 1.63
SF3B2-209ENST00000530322 ZNF335Q9H4Z2 1342 aaPredicted RBP25.24■■□□□ 1.63
SF3B2-209ENST00000530322 TXNDC2Q86VQ3 553 aa25.24■■□□□ 1.63
SF3B2-209ENST00000530322 EID1Q9Y6B2 187 aa25.23■■□□□ 1.63
SF3B2-209ENST00000530322 SLC4A1APQ9BWU0 796 aaKnown RBP25.21■■□□□ 1.63
SF3B2-209ENST00000530322 TRPM2O94759 1503 aa25.19■■□□□ 1.62
SF3B2-209ENST00000530322 ZFYVE9O95405 1425 aa25.18■■□□□ 1.62
SF3B2-209ENST00000530322 ILDR1Q86SU0 546 aaPredicted RBP25.17■■□□□ 1.62
SF3B2-209ENST00000530322 CLTCL1P53675 1640 aa25.16■■□□□ 1.62
SF3B2-209ENST00000530322 CHGAP10645 457 aaKnown RBP25.16■■□□□ 1.62
SF3B2-209ENST00000530322 FBXO41Q8TF61 875 aa25.16■■□□□ 1.62
SF3B2-209ENST00000530322 RAB3GAP2Q9H2M9 1393 aa25.16■■□□□ 1.62
SF3B2-209ENST00000530322 ACIN1Q9UKV3 1341 aaKnown RBP25.15■■□□□ 1.62
SF3B2-209ENST00000530322 RIMS2Q9UQ26 1411 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms