RNA–Protein interactions for RNA: ENST00000530302.1

CLINT1-209, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-209ENST00000530302 LMTK3Q96Q04 1460 aa11.38□□□□□ -0.59
CLINT1-209ENST00000530302 RSPH4AQ5TD94 716 aa11.37□□□□□ -0.59
CLINT1-209ENST00000530302 MROH1Q8NDA8 1641 aa11.36□□□□□ -0.59
CLINT1-209ENST00000530302 RNF17Q9BXT8 1623 aaKnown RBP11.36□□□□□ -0.59
CLINT1-209ENST00000530302 TSPY4P0CV99 314 aa11.36□□□□□ -0.59
CLINT1-209ENST00000530302 TSPY10P0CW01 314 aa11.36□□□□□ -0.59
CLINT1-209ENST00000530302 MROH2AA6NES4 1674 aa11.36□□□□□ -0.59
CLINT1-209ENST00000530302 PTPRKQ15262 1439 aa11.35□□□□□ -0.59
CLINT1-209ENST00000530302 EIF2AK4Q9P2K8 1649 aaKnown RBP11.35□□□□□ -0.59
CLINT1-209ENST00000530302 KIF15Q9NS87 1388 aa11.34□□□□□ -0.59
CLINT1-209ENST00000530302 FAM50AQ14320 339 aaKnown RBP11.34□□□□□ -0.59
CLINT1-209ENST00000530302 GGT6Q6P531 493 aa11.34□□□□□ -0.59
CLINT1-209ENST00000530302 DUOX2Q9NRD8 1548 aa11.34□□□□□ -0.59
CLINT1-209ENST00000530302 PREX1Q8TCU6 1659 aa11.33□□□□□ -0.6
CLINT1-209ENST00000530302 KIF3BO15066 747 aa11.33□□□□□ -0.6
CLINT1-209ENST00000530302 CHIC2Q9UKJ5 165 aa11.33□□□□□ -0.6
CLINT1-209ENST00000530302 CNTLNQ9NXG0 1405 aa11.33□□□□□ -0.6
CLINT1-209ENST00000530302 ADGRL2O95490 1459 aa11.32□□□□□ -0.6
CLINT1-209ENST00000530302 RRP7BPQ9NSQ0 103 aa11.32□□□□□ -0.6
CLINT1-209ENST00000530302 KDM5DQ9BY66 1539 aa11.31□□□□□ -0.6
CLINT1-209ENST00000530302 NCOA1Q15788 1441 aa11.31□□□□□ -0.6
CLINT1-209ENST00000530302 CEP152O94986 1710 aa11.31□□□□□ -0.6
CLINT1-209ENST00000530302 ABCC3O15438 1527 aa11.3□□□□□ -0.6
CLINT1-209ENST00000530302 ZMYM3Q14202 1370 aa11.3□□□□□ -0.6
CLINT1-209ENST00000530302 DEPDC5O75140 1603 aa11.3□□□□□ -0.6
CLINT1-209ENST00000530302 PRDM15P57071 1507 aaPredicted RBP11.3□□□□□ -0.6
CLINT1-209ENST00000530302 ERBINQ96RT1 1412 aa11.29□□□□□ -0.6
CLINT1-209ENST00000530302 RRBP1Q9P2E9 1410 aaKnown RBP11.29□□□□□ -0.6
CLINT1-209ENST00000530302 SETD1BQ9UPS6 1966 aaKnown RBP11.29□□□□□ -0.6
CLINT1-209ENST00000530302 HSPA2P54652 639 aa11.29□□□□□ -0.6
CLINT1-209ENST00000530302 ANKRD30AQ9BXX3 1397 aa11.28□□□□□ -0.6
CLINT1-209ENST00000530302 MYO3AQ8NEV4 1616 aa11.28□□□□□ -0.6
CLINT1-209ENST00000530302 ESF1Q9H501 851 aaKnown RBP11.28□□□□□ -0.6
CLINT1-209ENST00000530302 FAM135AQ9P2D6 1515 aa11.28□□□□□ -0.6
CLINT1-209ENST00000530302 ZC3H13Q5T200 1668 aaKnown RBP11.27□□□□□ -0.6
CLINT1-209ENST00000530302 CAMSAP1Q5T5Y3 1602 aa11.27□□□□□ -0.61
CLINT1-209ENST00000530302 NPATQ14207 1427 aa11.26□□□□□ -0.61
CLINT1-209ENST00000530302 PZPP20742 1482 aa11.26□□□□□ -0.61
CLINT1-209ENST00000530302 ZNF142P52746 1687 aaPredicted RBP11.25□□□□□ -0.61
CLINT1-209ENST00000530302 ITGAEP38570 1179 aa11.25□□□□□ -0.61
CLINT1-209ENST00000530302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLINT1-209ENST00000530302 UHRF1BP1Q6BDS2 1440 aa11.25□□□□□ -0.61
CLINT1-209ENST00000530302 CFAP65Q6ZU64 1925 aaKnown RBP11.25□□□□□ -0.61
CLINT1-209ENST00000530302 VWDEQ8N2E2 1590 aa11.24□□□□□ -0.61
CLINT1-209ENST00000530302 STRCQ7RTU9 1775 aa11.24□□□□□ -0.61
CLINT1-209ENST00000530302 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
CLINT1-209ENST00000530302 WASHC2CQ9Y4E1 1318 aa11.24□□□□□ -0.61
CLINT1-209ENST00000530302 ANKRD50Q9ULJ7 1429 aa11.24□□□□□ -0.61
CLINT1-209ENST00000530302 ROCK1Q13464 1354 aa11.23□□□□□ -0.61
CLINT1-209ENST00000530302 CEP170BQ9Y4F5 1589 aaPredicted RBP11.23□□□□□ -0.61
CLINT1-209ENST00000530302 UNC13BO14795 1591 aa11.22□□□□□ -0.61
CLINT1-209ENST00000530302 SPATA31D1Q6ZQQ2 1576 aa11.21□□□□□ -0.61
CLINT1-209ENST00000530302 ERVK-7P63135 1459 aa11.21□□□□□ -0.61
CLINT1-209ENST00000530302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.617e-7■■□□□ 12.2
CLINT1-209ENST00000530302 LMTK2Q8IWU2 1503 aa11.2□□□□□ -0.62
CLINT1-209ENST00000530302 TNRQ92752 1358 aa11.2□□□□□ -0.62
CLINT1-209ENST00000530302 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
CLINT1-209ENST00000530302 GCC2Q8IWJ2 1684 aa11.19□□□□□ -0.62
CLINT1-209ENST00000530302 A2ML1A8K2U0 1454 aa11.19□□□□□ -0.62
CLINT1-209ENST00000530302 ARHGAP31Q2M1Z3 1444 aa11.18□□□□□ -0.62
CLINT1-209ENST00000530302 SYNMO15061 1565 aa11.17□□□□□ -0.62
CLINT1-209ENST00000530302 TET3O43151 1660 aa11.17□□□□□ -0.62
CLINT1-209ENST00000530302 NAIPQ13075 1403 aa11.17□□□□□ -0.62
CLINT1-209ENST00000530302 IQGAP3Q86VI3 1631 aa11.17□□□□□ -0.62
CLINT1-209ENST00000530302 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
CLINT1-209ENST00000530302 KANK1Q14678 1352 aa11.16□□□□□ -0.62
CLINT1-209ENST00000530302 E9PCH4 1651 aa11.15□□□□□ -0.62
CLINT1-209ENST00000530302 UBR1Q8IWV7 1749 aa11.15□□□□□ -0.63
CLINT1-209ENST00000530302 PLA2R1Q13018 1463 aa11.14□□□□□ -0.63
CLINT1-209ENST00000530302 NLRP1Q9C000 1473 aa11.14□□□□□ -0.63
CLINT1-209ENST00000530302 NEURL4Q96JN8 1562 aa11.14□□□□□ -0.63
CLINT1-209ENST00000530302 PIK3C2BO00750 1634 aa11.13□□□□□ -0.63
CLINT1-209ENST00000530302 POLR1AO95602 1720 aaPredicted RBP11.13□□□□□ -0.63
CLINT1-209ENST00000530302 UGGT1Q9NYU2 1555 aa11.13□□□□□ -0.63
CLINT1-209ENST00000530302 HFM1A2PYH4 1435 aa11.13□□□□□ -0.63
CLINT1-209ENST00000530302 NOS1P29475 1434 aa11.13□□□□□ -0.63
CLINT1-209ENST00000530302 NCKAP5LQ9HCH0 1330 aa11.11□□□□□ -0.63
CLINT1-209ENST00000530302 NUP155O75694 1391 aa11.11□□□□□ -0.63
CLINT1-209ENST00000530302 MYO5BQ9ULV0 1848 aa11.1□□□□□ -0.63
CLINT1-209ENST00000530302 RPRD2Q5VT52 1461 aaKnown RBP11.1□□□□□ -0.63
CLINT1-209ENST00000530302 PTPRTO14522 1441 aa11.09□□□□□ -0.63
CLINT1-209ENST00000530302 ADGRB3O60242 1522 aa11.08□□□□□ -0.64
CLINT1-209ENST00000530302 KDM5AP29375 1690 aaKnown RBP11.07□□□□□ -0.64
CLINT1-209ENST00000530302 SPHKAPQ2M3C7 1700 aa11.06□□□□□ -0.64
CLINT1-209ENST00000530302 ARHGAP23Q9P227 1491 aa11.06□□□□□ -0.64
CLINT1-209ENST00000530302 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
CLINT1-209ENST00000530302 SLIT1O75093 1534 aa11.06□□□□□ -0.64
CLINT1-209ENST00000530302 IDI1Q13907 227 aa11.06□□□□□ -0.64
CLINT1-209ENST00000530302 IQGAP1P46940 1657 aa11.05□□□□□ -0.64
CLINT1-209ENST00000530302 TMEM131LA2VDJ0 1609 aa11.05□□□□□ -0.64
CLINT1-209ENST00000530302 PKD2Q13563 968 aa11.04□□□□□ -0.64
CLINT1-209ENST00000530302 MED14O60244 1454 aa11.04□□□□□ -0.64
CLINT1-209ENST00000530302 CLTCL1P53675 1640 aa11.03□□□□□ -0.64
CLINT1-209ENST00000530302 LTKP29376 864 aa11.03□□□□□ -0.64
CLINT1-209ENST00000530302 THEMISQ8N1K5 641 aaPredicted RBP11.03□□□□□ -0.64
CLINT1-209ENST00000530302 SCAF11Q99590 1463 aaKnown RBP11.03□□□□□ -0.64
CLINT1-209ENST00000530302 ZNF335Q9H4Z2 1342 aaPredicted RBP11.03□□□□□ -0.64
CLINT1-209ENST00000530302 NPHP4O75161 1426 aaPredicted RBP11.02□□□□□ -0.64
CLINT1-209ENST00000530302 STRCP1A6NGW2 1772 aa11.02□□□□□ -0.65
CLINT1-209ENST00000530302 TMEM2Q9UHN6 1383 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms