RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 PDIA6Q15084 440 aa12.84□□□□□ -0.35
SVIP-204ENST00000530199 RBM26Q5T8P6 1007 aaKnown RBP12.84□□□□□ -0.35
SVIP-204ENST00000530199 DIP2BQ9P265 1576 aa12.83□□□□□ -0.36
SVIP-204ENST00000530199 MAPKBP1O60336 1514 aa12.83□□□□□ -0.36
SVIP-204ENST00000530199 CEP170Q5SW79 1584 aa12.82□□□□□ -0.36
SVIP-204ENST00000530199 BARGINQ6ZT62 677 aa12.82□□□□□ -0.36
SVIP-204ENST00000530199 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
SVIP-204ENST00000530199 G3V3G9 751 aa12.81□□□□□ -0.36
SVIP-204ENST00000530199 KIF3CO14782 793 aa12.81□□□□□ -0.36
SVIP-204ENST00000530199 PLPP6Q8IY26 295 aa12.81□□□□□ -0.36
SVIP-204ENST00000530199 CCDC88BA6NC98 1476 aa12.8□□□□□ -0.36
SVIP-204ENST00000530199 PLCG2P16885 1265 aa12.8□□□□□ -0.36
SVIP-204ENST00000530199 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
SVIP-204ENST00000530199 GPIHBP1Q8IV16 184 aa12.79□□□□□ -0.36
SVIP-204ENST00000530199 SHROOM2Q13796 1616 aa12.78□□□□□ -0.36
SVIP-204ENST00000530199 ILDR2Q71H61 639 aa12.77□□□□□ -0.37
SVIP-204ENST00000530199 L3MBTL3Q96JM7 780 aaPredicted RBP12.77□□□□□ -0.37
SVIP-204ENST00000530199 TIMELESSQ9UNS1 1208 aa12.76□□□□□ -0.37
SVIP-204ENST00000530199 NUP160Q12769 1436 aa12.75□□□□□ -0.37
SVIP-204ENST00000530199 FGD5Q6ZNL6 1462 aa12.75□□□□□ -0.37
SVIP-204ENST00000530199 GABBR2O75899 941 aa12.74□□□□□ -0.37
SVIP-204ENST00000530199 PBRM1Q86U86 1689 aa12.73□□□□□ -0.37
SVIP-204ENST00000530199 GRIN2AQ12879 1464 aa12.72□□□□□ -0.37
SVIP-204ENST00000530199 MAP3K9P80192 1104 aa12.71□□□□□ -0.37
SVIP-204ENST00000530199 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
SVIP-204ENST00000530199 AK7Q96M32 723 aa12.71□□□□□ -0.37
SVIP-204ENST00000530199 TMEM92Q6UXU6 159 aa12.7□□□□□ -0.38
SVIP-204ENST00000530199 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
SVIP-204ENST00000530199 SEC24BO95487 1268 aa12.69□□□□□ -0.38
SVIP-204ENST00000530199 KRI1Q8N9T8 703 aaKnown RBP12.69□□□□□ -0.38
SVIP-204ENST00000530199 TSPOAP1O95153 1857 aa12.68□□□□□ -0.38
SVIP-204ENST00000530199 ERICH6Q7L0X2 663 aa12.67□□□□□ -0.38
SVIP-204ENST00000530199 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
SVIP-204ENST00000530199 OXER1Q8TDS5 423 aa12.66□□□□□ -0.38
SVIP-204ENST00000530199 DISP3Q9P2K9 1392 aa12.66□□□□□ -0.38
SVIP-204ENST00000530199 GRXCR2A6NFK2 248 aa12.65□□□□□ -0.38
SVIP-204ENST00000530199 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
SVIP-204ENST00000530199 PRG4Q92954 1404 aaPredicted RBP12.64□□□□□ -0.39
SVIP-204ENST00000530199 ABCA5Q8WWZ7 1642 aa12.64□□□□□ -0.39
SVIP-204ENST00000530199 GPR37O15354 613 aa12.64□□□□□ -0.39
SVIP-204ENST00000530199 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
SVIP-204ENST00000530199 TOP2BQ02880 1626 aa12.62□□□□□ -0.39
SVIP-204ENST00000530199 ADCY10Q96PN6 1610 aa12.62□□□□□ -0.39
SVIP-204ENST00000530199 POTEFA5A3E0 1075 aa12.61□□□□□ -0.39
SVIP-204ENST00000530199 PTGER2P43116 358 aa12.61□□□□□ -0.39
SVIP-204ENST00000530199 ABCA10Q8WWZ4 1543 aa12.61□□□□□ -0.39
SVIP-204ENST00000530199 C7P10643 843 aa12.6□□□□□ -0.39
SVIP-204ENST00000530199 OSBPP22059 807 aa12.6□□□□□ -0.39
SVIP-204ENST00000530199 CUX1P39880 1505 aa12.6□□□□□ -0.39
SVIP-204ENST00000530199 ADAMTS12P58397 1594 aa12.6□□□□□ -0.39
SVIP-204ENST00000530199 TRIM66O15016 1216 aa12.59□□□□□ -0.39
SVIP-204ENST00000530199 COL17A1Q9UMD9 1497 aaPredicted RBP12.59□□□□□ -0.39
SVIP-204ENST00000530199 PPRC1Q5VV67 1664 aaKnown RBP12.58□□□□□ -0.4
SVIP-204ENST00000530199 NUTM2FA1L443 756 aa12.58□□□□□ -0.4
SVIP-204ENST00000530199 TBC1D12O60347 775 aa12.58□□□□□ -0.4
SVIP-204ENST00000530199 JPH4Q96JJ6 628 aa12.58□□□□□ -0.4
SVIP-204ENST00000530199 GPBP1L1Q9HC44 474 aaPredicted RBP12.58□□□□□ -0.4
SVIP-204ENST00000530199 GLI2P10070 1586 aa12.56□□□□□ -0.4
SVIP-204ENST00000530199 PDE4DQ08499 809 aa12.55□□□□□ -0.4
SVIP-204ENST00000530199 DDX12PQ92771 950 aa12.55□□□□□ -0.4
SVIP-204ENST00000530199 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
SVIP-204ENST00000530199 FHAD1B1AJZ9 1412 aa12.54□□□□□ -0.4
SVIP-204ENST00000530199 EVI5O60447 810 aa12.54□□□□□ -0.4
SVIP-204ENST00000530199 KDM4CQ9H3R0 1056 aa12.54□□□□□ -0.4
SVIP-204ENST00000530199 MINK1Q8N4C8 1332 aaPredicted RBP12.54□□□□□ -0.4
SVIP-204ENST00000530199 C3orf67Q6ZVT6 689 aa12.53□□□□□ -0.4
SVIP-204ENST00000530199 PTCD2Q8WV60 388 aaKnown RBP12.53□□□□□ -0.4
SVIP-204ENST00000530199 C14orf37Q86TY3 774 aa12.52□□□□□ -0.41
SVIP-204ENST00000530199 MAP2K5Q13163 448 aa12.51□□□□□ -0.41
SVIP-204ENST00000530199 DAXXQ9UER7 740 aaPredicted RBP12.51□□□□□ -0.41
SVIP-204ENST00000530199 GNPATO15228 680 aa12.5□□□□□ -0.41
SVIP-204ENST00000530199 FCHSD2O94868 740 aa12.5□□□□□ -0.41
SVIP-204ENST00000530199 SPATA31D1Q6ZQQ2 1576 aa12.49□□□□□ -0.41
SVIP-204ENST00000530199 SLC34A2O95436 690 aa12.49□□□□□ -0.41
SVIP-204ENST00000530199 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
SVIP-204ENST00000530199 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
SVIP-204ENST00000530199 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
SVIP-204ENST00000530199 IRF6O14896 467 aa12.48□□□□□ -0.41
SVIP-204ENST00000530199 HIC1Q14526 733 aa12.48□□□□□ -0.41
SVIP-204ENST00000530199 IL27Q8NEV9 243 aa12.48□□□□□ -0.41
SVIP-204ENST00000530199 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
SVIP-204ENST00000530199 CERKQ8TCT0 537 aa12.47□□□□□ -0.41
SVIP-204ENST00000530199 CCDC102AQ96A19 550 aa12.47□□□□□ -0.41
SVIP-204ENST00000530199 PLB1Q6P1J6 1458 aa12.46□□□□□ -0.41
SVIP-204ENST00000530199 TEX14Q8IWB6 1497 aa12.46□□□□□ -0.42
SVIP-204ENST00000530199 POTEHQ6S545 545 aa12.45□□□□□ -0.42
SVIP-204ENST00000530199 RUSC2Q8N2Y8 1516 aa12.45□□□□□ -0.42
SVIP-204ENST00000530199 FECHP22830 423 aa12.44□□□□□ -0.42
SVIP-204ENST00000530199 PTGDRQ13258 359 aa12.44□□□□□ -0.42
SVIP-204ENST00000530199 ASXL2Q76L83 1435 aa12.44□□□□□ -0.42
SVIP-204ENST00000530199 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
SVIP-204ENST00000530199 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
SVIP-204ENST00000530199 MAP3K4Q9Y6R4 1608 aa12.42□□□□□ -0.42
SVIP-204ENST00000530199 AMHR2Q16671 573 aa12.42□□□□□ -0.42
SVIP-204ENST00000530199 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
SVIP-204ENST00000530199 PTPRMP28827 1452 aa12.41□□□□□ -0.42
SVIP-204ENST00000530199 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
SVIP-204ENST00000530199 PHF14O94880 888 aa12.39□□□□□ -0.43
SVIP-204ENST00000530199 EPAS1Q99814 870 aa12.38□□□□□ -0.43
SVIP-204ENST00000530199 FAM117AQ9C073 453 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms