RNA–Protein interactions for RNA: ENST00000529974.1

CTSC-206, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-206ENST00000529974 SHANK2Q9UPX8 1470 aa17.58■□□□□ 0.41
CTSC-206ENST00000529974 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
CTSC-206ENST00000529974 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.4
CTSC-206ENST00000529974 TCOF1Q13428 1488 aaKnown RBP17.57■□□□□ 0.4
CTSC-206ENST00000529974 ZC3H13Q5T200 1668 aaKnown RBP17.57■□□□□ 0.4
CTSC-206ENST00000529974 FGD6Q6ZV73 1430 aa17.56■□□□□ 0.4
CTSC-206ENST00000529974 KIF3BO15066 747 aa17.56■□□□□ 0.4
CTSC-206ENST00000529974 PZPP20742 1482 aa17.56■□□□□ 0.4
CTSC-206ENST00000529974 ABCC5O15440 1437 aa17.55■□□□□ 0.4
CTSC-206ENST00000529974 ABCC3O15438 1527 aa17.54■□□□□ 0.4
CTSC-206ENST00000529974 TSPY4P0CV99 314 aa17.54■□□□□ 0.4
CTSC-206ENST00000529974 TSPY10P0CW01 314 aa17.54■□□□□ 0.4
CTSC-206ENST00000529974 PTPRTO14522 1441 aa17.54■□□□□ 0.4
CTSC-206ENST00000529974 DUOX2Q9NRD8 1548 aa17.53■□□□□ 0.4
CTSC-206ENST00000529974 FBXO41Q8TF61 875 aa17.53■□□□□ 0.4
CTSC-206ENST00000529974 PLA2R1Q13018 1463 aa17.52■□□□□ 0.4
CTSC-206ENST00000529974 DAPK1P53355 1430 aa17.52■□□□□ 0.4
CTSC-206ENST00000529974 CEP152O94986 1710 aa17.52■□□□□ 0.39
CTSC-206ENST00000529974 APLP2Q06481 763 aa17.51■□□□□ 0.39
CTSC-206ENST00000529974 A2ML1A8K2U0 1454 aa17.5■□□□□ 0.39
CTSC-206ENST00000529974 PRDM15P57071 1507 aaPredicted RBP17.5■□□□□ 0.39
CTSC-206ENST00000529974 DEPDC5O75140 1603 aa17.5■□□□□ 0.39
CTSC-206ENST00000529974 KIF15Q9NS87 1388 aa17.49■□□□□ 0.39
CTSC-206ENST00000529974 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
CTSC-206ENST00000529974 TNRQ92752 1358 aa17.48■□□□□ 0.39
CTSC-206ENST00000529974 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
CTSC-206ENST00000529974 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
CTSC-206ENST00000529974 POLR1AO95602 1720 aaPredicted RBP17.47■□□□□ 0.39
CTSC-206ENST00000529974 SPATA31D1Q6ZQQ2 1576 aa17.47■□□□□ 0.39
CTSC-206ENST00000529974 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
CTSC-206ENST00000529974 FBXO31Q5XUX0 539 aaPredicted RBP17.45■□□□□ 0.38
CTSC-206ENST00000529974 CERKQ8TCT0 537 aa17.45■□□□□ 0.38
CTSC-206ENST00000529974 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
CTSC-206ENST00000529974 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
CTSC-206ENST00000529974 ERVK-7P63135 1459 aa17.44■□□□□ 0.38
CTSC-206ENST00000529974 NLRP1Q9C000 1473 aa17.43■□□□□ 0.38
CTSC-206ENST00000529974 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
CTSC-206ENST00000529974 VWDEQ8N2E2 1590 aa17.4■□□□□ 0.38
CTSC-206ENST00000529974 UGGT1Q9NYU2 1555 aa17.39■□□□□ 0.37
CTSC-206ENST00000529974 RRP7BPQ9NSQ0 103 aa17.38■□□□□ 0.37
CTSC-206ENST00000529974 ANKRD30AQ9BXX3 1397 aa17.38■□□□□ 0.37
CTSC-206ENST00000529974 PKD2Q13563 968 aa17.37■□□□□ 0.37
CTSC-206ENST00000529974 UBR1Q8IWV7 1749 aa17.37■□□□□ 0.37
CTSC-206ENST00000529974 ARHGAP31Q2M1Z3 1444 aa17.37■□□□□ 0.37
CTSC-206ENST00000529974 CFAP65Q6ZU64 1925 aaKnown RBP17.37■□□□□ 0.37
CTSC-206ENST00000529974 LMTK2Q8IWU2 1503 aa17.37■□□□□ 0.37
CTSC-206ENST00000529974 IQSEC2Q5JU85 1478 aa17.36■□□□□ 0.37
CTSC-206ENST00000529974 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
CTSC-206ENST00000529974 EFCAB6Q5THR3 1501 aa17.34■□□□□ 0.37
CTSC-206ENST00000529974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.368e-9■□□□□ 8.6
CTSC-206ENST00000529974 ZNF335Q9H4Z2 1342 aaPredicted RBP17.33■□□□□ 0.36
CTSC-206ENST00000529974 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
CTSC-206ENST00000529974 MED14O60244 1454 aa17.31■□□□□ 0.36
CTSC-206ENST00000529974 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
CTSC-206ENST00000529974 PIK3C2BO00750 1634 aa17.31■□□□□ 0.36
CTSC-206ENST00000529974 UNC13BO14795 1591 aa17.3■□□□□ 0.36
CTSC-206ENST00000529974 SYNMO15061 1565 aa17.3■□□□□ 0.36
CTSC-206ENST00000529974 ANKRD50Q9ULJ7 1429 aa17.29■□□□□ 0.36
CTSC-206ENST00000529974 KANK1Q14678 1352 aa17.28■□□□□ 0.36
CTSC-206ENST00000529974 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
CTSC-206ENST00000529974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.36
CTSC-206ENST00000529974 NPHP4O75161 1426 aaPredicted RBP17.27■□□□□ 0.35
CTSC-206ENST00000529974 SLIT1O75093 1534 aa17.26■□□□□ 0.35
CTSC-206ENST00000529974 TET3O43151 1660 aa17.26■□□□□ 0.35
CTSC-206ENST00000529974 ARHGAP23Q9P227 1491 aa17.26■□□□□ 0.35
CTSC-206ENST00000529974 THEMISQ8N1K5 641 aaPredicted RBP17.26■□□□□ 0.35
CTSC-206ENST00000529974 GCC2Q8IWJ2 1684 aa17.25■□□□□ 0.35
CTSC-206ENST00000529974 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
CTSC-206ENST00000529974 NOS1P29475 1434 aa17.24■□□□□ 0.35
CTSC-206ENST00000529974 CPS1P31327 1500 aa17.24■□□□□ 0.35
CTSC-206ENST00000529974 ROCK1Q13464 1354 aa17.24■□□□□ 0.35
CTSC-206ENST00000529974 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
CTSC-206ENST00000529974 SCAF11Q99590 1463 aaKnown RBP17.23■□□□□ 0.35
CTSC-206ENST00000529974 ADGRB3O60242 1522 aa17.22■□□□□ 0.35
CTSC-206ENST00000529974 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
CTSC-206ENST00000529974 RPRD2Q5VT52 1461 aaKnown RBP17.21■□□□□ 0.35
CTSC-206ENST00000529974 PPARGC1BQ86YN6 1023 aaKnown RBP17.2■□□□□ 0.34
CTSC-206ENST00000529974 E9PCH4 1651 aa17.2■□□□□ 0.34
CTSC-206ENST00000529974 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
CTSC-206ENST00000529974 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
CTSC-206ENST00000529974 TMEM2Q9UHN6 1383 aa17.16■□□□□ 0.34
CTSC-206ENST00000529974 ALKQ9UM73 1620 aa17.16■□□□□ 0.34
CTSC-206ENST00000529974 LTKP29376 864 aa17.15■□□□□ 0.34
CTSC-206ENST00000529974 IDI1Q13907 227 aa17.13■□□□□ 0.33
CTSC-206ENST00000529974 TMEM131LA2VDJ0 1609 aa17.13■□□□□ 0.33
CTSC-206ENST00000529974 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
CTSC-206ENST00000529974 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
CTSC-206ENST00000529974 UBAP1LF5GYI3 381 aa17.11■□□□□ 0.33
CTSC-206ENST00000529974 ITGAEP38570 1179 aa17.1■□□□□ 0.33
CTSC-206ENST00000529974 TXNDC2Q86VQ3 553 aa17.1■□□□□ 0.33
CTSC-206ENST00000529974 ZFYVE9O95405 1425 aa17.09■□□□□ 0.33
CTSC-206ENST00000529974 SLC52A1Q9NWF4 448 aa17.08■□□□□ 0.32
CTSC-206ENST00000529974 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
CTSC-206ENST00000529974 NWD1Q149M9 1564 aa17.06■□□□□ 0.32
CTSC-206ENST00000529974 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
CTSC-206ENST00000529974 EID1Q9Y6B2 187 aa17.06■□□□□ 0.32
CTSC-206ENST00000529974 NAIPQ13075 1403 aa17.05■□□□□ 0.32
CTSC-206ENST00000529974 NUP155O75694 1391 aa17.05■□□□□ 0.32
CTSC-206ENST00000529974 RIMS2Q9UQ26 1411 aa17.03■□□□□ 0.32
CTSC-206ENST00000529974 PLEKHG1Q9ULL1 1385 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms