RNA–Protein interactions for RNA: ENST00000529854.1

GSDMD-209, Transcript of gasdermin D, humanhuman

TSL 4

Gene GSDMD, Length 511 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-209ENST00000529854 PTPRKQ15262 1439 aa26.14■■□□□ 1.78
GSDMD-209ENST00000529854 PPP6R1Q9UPN7 881 aa26.14■■□□□ 1.78
GSDMD-209ENST00000529854 RNF17Q9BXT8 1623 aaKnown RBP26.14■■□□□ 1.77
GSDMD-209ENST00000529854 NCOA1Q15788 1441 aa26.13■■□□□ 1.77
GSDMD-209ENST00000529854 ADGRL2O95490 1459 aa26.12■■□□□ 1.77
GSDMD-209ENST00000529854 KDM5DQ9BY66 1539 aa26.12■■□□□ 1.77
GSDMD-209ENST00000529854 PREX1Q8TCU6 1659 aa26.11■■□□□ 1.77
GSDMD-209ENST00000529854 ERBINQ96RT1 1412 aa26.11■■□□□ 1.77
GSDMD-209ENST00000529854 MROH1Q8NDA8 1641 aa26.1■■□□□ 1.77
GSDMD-209ENST00000529854 HSPA2P54652 639 aa26.1■■□□□ 1.77
GSDMD-209ENST00000529854 ITGAEP38570 1179 aa26.09■■□□□ 1.77
GSDMD-209ENST00000529854 WASHC2CQ9Y4E1 1318 aa26.09■■□□□ 1.77
GSDMD-209ENST00000529854 SETD1BQ9UPS6 1966 aaKnown RBP26.07■■□□□ 1.76
GSDMD-209ENST00000529854 FAM135AQ9P2D6 1515 aa26.07■■□□□ 1.76
GSDMD-209ENST00000529854 RRBP1Q9P2E9 1410 aaKnown RBP26.06■■□□□ 1.76
GSDMD-209ENST00000529854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.06■■□□□ 1.76
GSDMD-209ENST00000529854 UHRF1BP1Q6BDS2 1440 aa26.05■■□□□ 1.76
GSDMD-209ENST00000529854 NPATQ14207 1427 aa26.05■■□□□ 1.76
GSDMD-209ENST00000529854 ABCC3O15438 1527 aa26.04■■□□□ 1.76
GSDMD-209ENST00000529854 CEP152O94986 1710 aa26.02■■□□□ 1.76
GSDMD-209ENST00000529854 PRDM15P57071 1507 aaPredicted RBP26.01■■□□□ 1.75
GSDMD-209ENST00000529854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.01■■□□□ 1.75
GSDMD-209ENST00000529854 ZC3H13Q5T200 1668 aaKnown RBP26■■□□□ 1.75
GSDMD-209ENST00000529854 DEPDC5O75140 1603 aa25.99■■□□□ 1.75
GSDMD-209ENST00000529854 PZPP20742 1482 aa25.99■■□□□ 1.75
GSDMD-209ENST00000529854 ANKRD50Q9ULJ7 1429 aa25.99■■□□□ 1.75
GSDMD-209ENST00000529854 FBXO31Q5XUX0 539 aaPredicted RBP25.99■■□□□ 1.75
GSDMD-209ENST00000529854 ROCK1Q13464 1354 aa25.97■■□□□ 1.75
GSDMD-209ENST00000529854 MYO3AQ8NEV4 1616 aa25.96■■□□□ 1.75
GSDMD-209ENST00000529854 CAMSAP1Q5T5Y3 1602 aa25.95■■□□□ 1.74
GSDMD-209ENST00000529854 KANK1Q14678 1352 aa25.92■■□□□ 1.74
GSDMD-209ENST00000529854 TNRQ92752 1358 aa25.92■■□□□ 1.74
GSDMD-209ENST00000529854 VWDEQ8N2E2 1590 aa25.9■■□□□ 1.74
GSDMD-209ENST00000529854 CEP170BQ9Y4F5 1589 aaPredicted RBP25.89■■□□□ 1.73
GSDMD-209ENST00000529854 ZNF142P52746 1687 aaPredicted RBP25.89■■□□□ 1.73
GSDMD-209ENST00000529854 CFAP65Q6ZU64 1925 aaKnown RBP25.88■■□□□ 1.73
GSDMD-209ENST00000529854 ERVK-7P63135 1459 aa25.86■■□□□ 1.73
GSDMD-209ENST00000529854 SPATA31D1Q6ZQQ2 1576 aa25.86■■□□□ 1.73
GSDMD-209ENST00000529854 LMTK2Q8IWU2 1503 aa25.85■■□□□ 1.73
GSDMD-209ENST00000529854 UNC13BO14795 1591 aa25.84■■□□□ 1.73
GSDMD-209ENST00000529854 STRCQ7RTU9 1775 aa25.84■■□□□ 1.73
GSDMD-209ENST00000529854 A2ML1A8K2U0 1454 aa25.84■■□□□ 1.73
GSDMD-209ENST00000529854 ARHGAP31Q2M1Z3 1444 aa25.83■■□□□ 1.73
GSDMD-209ENST00000529854 EFCAB6Q5THR3 1501 aa25.79■■□□□ 1.72
GSDMD-209ENST00000529854 NAIPQ13075 1403 aa25.78■■□□□ 1.72
GSDMD-209ENST00000529854 NLRP1Q9C000 1473 aa25.78■■□□□ 1.72
GSDMD-209ENST00000529854 GCC2Q8IWJ2 1684 aa25.76■■□□□ 1.71
GSDMD-209ENST00000529854 TET3O43151 1660 aa25.74■■□□□ 1.71
GSDMD-209ENST00000529854 NUP155O75694 1391 aa25.73■■□□□ 1.71
GSDMD-209ENST00000529854 NCKAP5LQ9HCH0 1330 aa25.73■■□□□ 1.71
GSDMD-209ENST00000529854 IQGAP3Q86VI3 1631 aa25.73■■□□□ 1.71
GSDMD-209ENST00000529854 UGGT1Q9NYU2 1555 aa25.73■■□□□ 1.71
GSDMD-209ENST00000529854 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
GSDMD-209ENST00000529854 HFM1A2PYH4 1435 aa25.72■■□□□ 1.71
GSDMD-209ENST00000529854 SYNMO15061 1565 aa25.69■■□□□ 1.7
GSDMD-209ENST00000529854 DMRT2Q9Y5R5 561 aa25.68■■□□□ 1.7
GSDMD-209ENST00000529854 NOS1P29475 1434 aa25.68■■□□□ 1.7
GSDMD-209ENST00000529854 RPRD2Q5VT52 1461 aaKnown RBP25.66■■□□□ 1.7
GSDMD-209ENST00000529854 PTPRTO14522 1441 aa25.66■■□□□ 1.7
GSDMD-209ENST00000529854 E9PCH4 1651 aa25.66■■□□□ 1.7
GSDMD-209ENST00000529854 THEMISQ8N1K5 641 aaPredicted RBP25.65■■□□□ 1.7
GSDMD-209ENST00000529854 PIK3C2BO00750 1634 aa25.65■■□□□ 1.7
GSDMD-209ENST00000529854 UBR1Q8IWV7 1749 aa25.65■■□□□ 1.7
GSDMD-209ENST00000529854 PKD2Q13563 968 aa25.64■■□□□ 1.7
GSDMD-209ENST00000529854 IDI1Q13907 227 aa25.62■■□□□ 1.69
GSDMD-209ENST00000529854 POLR1AO95602 1720 aaPredicted RBP25.61■■□□□ 1.69
GSDMD-209ENST00000529854 NEURL4Q96JN8 1562 aa25.61■■□□□ 1.69
GSDMD-209ENST00000529854 ANKLE2Q86XL3 938 aa25.58■■□□□ 1.69
GSDMD-209ENST00000529854 TRIM52Q96A61 297 aa25.58■■□□□ 1.69
GSDMD-209ENST00000529854 STAG3Q9UJ98 1225 aa25.57■■□□□ 1.68
GSDMD-209ENST00000529854 ADGRB3O60242 1522 aa25.54■■□□□ 1.68
GSDMD-209ENST00000529854 SLC52A1Q9NWF4 448 aa25.54■■□□□ 1.68
GSDMD-209ENST00000529854 ARHGAP23Q9P227 1491 aa25.53■■□□□ 1.68
GSDMD-209ENST00000529854 SLIT1O75093 1534 aa25.52■■□□□ 1.68
GSDMD-209ENST00000529854 NPHP4O75161 1426 aaPredicted RBP25.51■■□□□ 1.67
GSDMD-209ENST00000529854 KDM5AP29375 1690 aaKnown RBP25.51■■□□□ 1.67
GSDMD-209ENST00000529854 MED14O60244 1454 aa25.49■■□□□ 1.67
GSDMD-209ENST00000529854 SCAF11Q99590 1463 aaKnown RBP25.49■■□□□ 1.67
GSDMD-209ENST00000529854 TMEM2Q9UHN6 1383 aa25.49■■□□□ 1.67
GSDMD-209ENST00000529854 ZNF335Q9H4Z2 1342 aaPredicted RBP25.49■■□□□ 1.67
GSDMD-209ENST00000529854 LTKP29376 864 aa25.49■■□□□ 1.67
GSDMD-209ENST00000529854 SPHKAPQ2M3C7 1700 aa25.49■■□□□ 1.67
GSDMD-209ENST00000529854 TXNDC2Q86VQ3 553 aa25.48■■□□□ 1.67
GSDMD-209ENST00000529854 MYO5BQ9ULV0 1848 aa25.48■■□□□ 1.67
GSDMD-209ENST00000529854 SETD5Q9C0A6 1442 aa25.47■■□□□ 1.67
GSDMD-209ENST00000529854 IQGAP1P46940 1657 aa25.47■■□□□ 1.67
GSDMD-209ENST00000529854 LTBP4Q8N2S1 1624 aa25.47■■□□□ 1.67
GSDMD-209ENST00000529854 CHGAP10645 457 aaKnown RBP25.46■■□□□ 1.67
GSDMD-209ENST00000529854 CERKQ8TCT0 537 aa25.46■■□□□ 1.67
GSDMD-209ENST00000529854 SLC4A1APQ9BWU0 796 aaKnown RBP25.46■■□□□ 1.67
GSDMD-209ENST00000529854 TMEM131LA2VDJ0 1609 aa25.45■■□□□ 1.67
GSDMD-209ENST00000529854 EID1Q9Y6B2 187 aa25.43■■□□□ 1.66
GSDMD-209ENST00000529854 RAB3GAP2Q9H2M9 1393 aa25.42■■□□□ 1.66
GSDMD-209ENST00000529854 ILDR1Q86SU0 546 aaPredicted RBP25.4■■□□□ 1.66
GSDMD-209ENST00000529854 TRPM2O94759 1503 aa25.4■■□□□ 1.66
GSDMD-209ENST00000529854 CLTCL1P53675 1640 aa25.39■■□□□ 1.66
GSDMD-209ENST00000529854 FOXD1Q16676 465 aa25.39■■□□□ 1.66
GSDMD-209ENST00000529854 ZFYVE9O95405 1425 aa25.37■■□□□ 1.65
GSDMD-209ENST00000529854 RIMS2Q9UQ26 1411 aa25.37■■□□□ 1.65
GSDMD-209ENST00000529854 MPHOSPH9Q99550 1183 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms