RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 CAMSAP1Q5T5Y3 1602 aa25.34■■□□□ 1.65
TRIM3-209ENST00000529529 PKD2Q13563 968 aa25.29■■□□□ 1.64
TRIM3-209ENST00000529529 MYO3AQ8NEV4 1616 aa25.28■■□□□ 1.64
TRIM3-209ENST00000529529 CEP170BQ9Y4F5 1589 aaPredicted RBP25.27■■□□□ 1.64
TRIM3-209ENST00000529529 KDM5DQ9BY66 1539 aa25.27■■□□□ 1.64
TRIM3-209ENST00000529529 MAST1Q9Y2H9 1570 aa25.27■■□□□ 1.64
TRIM3-209ENST00000529529 TNRQ92752 1358 aa25.26■■□□□ 1.63
TRIM3-209ENST00000529529 A2ML1A8K2U0 1454 aa25.24■■□□□ 1.63
TRIM3-209ENST00000529529 PZPP20742 1482 aa25.24■■□□□ 1.63
TRIM3-209ENST00000529529 FAM135AQ9P2D6 1515 aa25.23■■□□□ 1.63
TRIM3-209ENST00000529529 PLA2R1Q13018 1463 aa25.22■■□□□ 1.63
TRIM3-209ENST00000529529 RRP7BPQ9NSQ0 103 aa25.22■■□□□ 1.63
TRIM3-209ENST00000529529 ZNF142P52746 1687 aaPredicted RBP25.22■■□□□ 1.63
TRIM3-209ENST00000529529 ABCC5O15440 1437 aa25.21■■□□□ 1.63
TRIM3-209ENST00000529529 LTBP4Q8N2S1 1624 aa25.19■■□□□ 1.62
TRIM3-209ENST00000529529 TCOF1Q13428 1488 aaKnown RBP25.19■■□□□ 1.62
TRIM3-209ENST00000529529 DNMT1P26358 1616 aaKnown RBP25.18■■□□□ 1.62
TRIM3-209ENST00000529529 ZNF335Q9H4Z2 1342 aaPredicted RBP25.17■■□□□ 1.62
TRIM3-209ENST00000529529 PTPN23Q9H3S7 1636 aa25.17■■□□□ 1.62
TRIM3-209ENST00000529529 THEMISQ8N1K5 641 aaPredicted RBP25.17■■□□□ 1.62
TRIM3-209ENST00000529529 FGD6Q6ZV73 1430 aa25.17■■□□□ 1.62
TRIM3-209ENST00000529529 CHIC2Q9UKJ5 165 aa25.16■■□□□ 1.62
TRIM3-209ENST00000529529 DUOX2Q9NRD8 1548 aa25.16■■□□□ 1.62
TRIM3-209ENST00000529529 KIF15Q9NS87 1388 aa25.16■■□□□ 1.62
TRIM3-209ENST00000529529 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
TRIM3-209ENST00000529529 ABCC3O15438 1527 aa25.14■■□□□ 1.62
TRIM3-209ENST00000529529 DAPK1P53355 1430 aa25.13■■□□□ 1.61
TRIM3-209ENST00000529529 ANKLE2Q86XL3 938 aa25.13■■□□□ 1.61
TRIM3-209ENST00000529529 EIF2AK4Q9P2K8 1649 aaKnown RBP25.12■■□□□ 1.61
TRIM3-209ENST00000529529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.12■■□□□ 1.61
TRIM3-209ENST00000529529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.12■■□□□ 1.61
TRIM3-209ENST00000529529 SHANK2Q9UPX8 1470 aa25.11■■□□□ 1.61
TRIM3-209ENST00000529529 NLRP1Q9C000 1473 aa25.1■■□□□ 1.61
TRIM3-209ENST00000529529 FAM50AQ14320 339 aaKnown RBP25.08■■□□□ 1.61
TRIM3-209ENST00000529529 MROH1Q8NDA8 1641 aa25.08■■□□□ 1.6
TRIM3-209ENST00000529529 ANKRD30AQ9BXX3 1397 aa25.07■■□□□ 1.6
TRIM3-209ENST00000529529 ERBINQ96RT1 1412 aa25.07■■□□□ 1.6
TRIM3-209ENST00000529529 UGGT1Q9NYU2 1555 aa25.06■■□□□ 1.6
TRIM3-209ENST00000529529 IQSEC2Q5JU85 1478 aa25.06■■□□□ 1.6
TRIM3-209ENST00000529529 ZC3H13Q5T200 1668 aaKnown RBP25.06■■□□□ 1.6
TRIM3-209ENST00000529529 CROCC2H7BZ55 1655 aa25.04■■□□□ 1.6
TRIM3-209ENST00000529529 ERVK-7P63135 1459 aa25.04■■□□□ 1.6
TRIM3-209ENST00000529529 SPATA31D1Q6ZQQ2 1576 aa25.03■■□□□ 1.6
TRIM3-209ENST00000529529 KANK1Q14678 1352 aa25.02■■□□□ 1.6
TRIM3-209ENST00000529529 UBAP1LF5GYI3 381 aa25.01■■□□□ 1.59
TRIM3-209ENST00000529529 CEP152O94986 1710 aa25■■□□□ 1.59
TRIM3-209ENST00000529529 NEURL4Q96JN8 1562 aa24.99■■□□□ 1.59
TRIM3-209ENST00000529529 ARHGAP31Q2M1Z3 1444 aa24.98■■□□□ 1.59
TRIM3-209ENST00000529529 PRDM15P57071 1507 aaPredicted RBP24.97■■□□□ 1.59
TRIM3-209ENST00000529529 NPHP4O75161 1426 aaPredicted RBP24.97■■□□□ 1.59
TRIM3-209ENST00000529529 POLR1AO95602 1720 aaPredicted RBP24.96■■□□□ 1.59
TRIM3-209ENST00000529529 CFAP65Q6ZU64 1925 aaKnown RBP24.95■■□□□ 1.58
TRIM3-209ENST00000529529 MED14O60244 1454 aa24.94■■□□□ 1.58
TRIM3-209ENST00000529529 ADGRL2O95490 1459 aa24.91■■□□□ 1.58
TRIM3-209ENST00000529529 DEPDC5O75140 1603 aa24.91■■□□□ 1.58
TRIM3-209ENST00000529529 TXNDC2Q86VQ3 553 aa24.91■■□□□ 1.58
TRIM3-209ENST00000529529 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
TRIM3-209ENST00000529529 STAG3Q9UJ98 1225 aa24.9■■□□□ 1.58
TRIM3-209ENST00000529529 LTKP29376 864 aa24.89■■□□□ 1.58
TRIM3-209ENST00000529529 CPS1P31327 1500 aa24.88■■□□□ 1.57
TRIM3-209ENST00000529529 IDI1Q13907 227 aa24.88■■□□□ 1.57
TRIM3-209ENST00000529529 EID1Q9Y6B2 187 aa24.87■■□□□ 1.57
TRIM3-209ENST00000529529 ANKRD50Q9ULJ7 1429 aa24.86■■□□□ 1.57
TRIM3-209ENST00000529529 LMTK2Q8IWU2 1503 aa24.86■■□□□ 1.57
TRIM3-209ENST00000529529 UBR1Q8IWV7 1749 aa24.86■■□□□ 1.57
TRIM3-209ENST00000529529 VWDEQ8N2E2 1590 aa24.85■■□□□ 1.57
TRIM3-209ENST00000529529 TOM1O60784 492 aa24.85■■□□□ 1.57
TRIM3-209ENST00000529529 DISP3Q9P2K9 1392 aa24.84■■□□□ 1.57
TRIM3-209ENST00000529529 SCAF1Q9H7N4 1312 aaKnown RBP24.84■■□□□ 1.57
TRIM3-209ENST00000529529 IQGAP1P46940 1657 aa24.83■■□□□ 1.57
TRIM3-209ENST00000529529 PIP4K2BP78356 416 aa24.83■■□□□ 1.57
TRIM3-209ENST00000529529 SCAF11Q99590 1463 aaKnown RBP24.83■■□□□ 1.56
TRIM3-209ENST00000529529 ITGAEP38570 1179 aa24.82■■□□□ 1.56
TRIM3-209ENST00000529529 ARHGAP23Q9P227 1491 aa24.81■■□□□ 1.56
TRIM3-209ENST00000529529 SLIT1O75093 1534 aa24.8■■□□□ 1.56
TRIM3-209ENST00000529529 TMEM2Q9UHN6 1383 aa24.8■■□□□ 1.56
TRIM3-209ENST00000529529 SLC52A1Q9NWF4 448 aa24.79■■□□□ 1.56
TRIM3-209ENST00000529529 PIK3C2BO00750 1634 aa24.79■■□□□ 1.56
TRIM3-209ENST00000529529 NOS1P29475 1434 aa24.78■■□□□ 1.56
TRIM3-209ENST00000529529 EFCAB6Q5THR3 1501 aa24.76■■□□□ 1.55
TRIM3-209ENST00000529529 ROCK1Q13464 1354 aa24.75■■□□□ 1.55
TRIM3-209ENST00000529529 HSPA1LP34931 641 aa24.74■■□□□ 1.55
TRIM3-209ENST00000529529 SYNMO15061 1565 aa24.74■■□□□ 1.55
TRIM3-209ENST00000529529 LRRC7Q96NW7 1537 aa24.73■■□□□ 1.55
TRIM3-209ENST00000529529 RPRD2Q5VT52 1461 aaKnown RBP24.7■■□□□ 1.55
TRIM3-209ENST00000529529 ILDR2Q71H61 639 aa24.7■■□□□ 1.54
TRIM3-209ENST00000529529 STRCP1A6NGW2 1772 aa24.7■■□□□ 1.54
TRIM3-209ENST00000529529 BCANQ96GW7 911 aa24.69■■□□□ 1.54
TRIM3-209ENST00000529529 SLC26A8Q96RN1 970 aa24.69■■□□□ 1.54
TRIM3-209ENST00000529529 KDM5AP29375 1690 aaKnown RBP24.66■■□□□ 1.54
TRIM3-209ENST00000529529 SENP3Q9H4L4 574 aaPredicted RBP24.66■■□□□ 1.54
TRIM3-209ENST00000529529 NUP155O75694 1391 aa24.66■■□□□ 1.54
TRIM3-209ENST00000529529 CHGAP10645 457 aaKnown RBP24.65■■□□□ 1.54
TRIM3-209ENST00000529529 TET3O43151 1660 aa24.65■■□□□ 1.54
TRIM3-209ENST00000529529 UNC13BO14795 1591 aa24.64■■□□□ 1.54
TRIM3-209ENST00000529529 HDGFP51858 240 aaKnown RBP24.64■■□□□ 1.54
TRIM3-209ENST00000529529 ADGRB3O60242 1522 aa24.64■■□□□ 1.53
TRIM3-209ENST00000529529 KCNA6P17658 529 aa24.63■■□□□ 1.53
TRIM3-209ENST00000529529 ALKQ9UM73 1620 aa24.61■■□□□ 1.53
TRIM3-209ENST00000529529 PPP1R15AO75807 674 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms