RNA–Protein interactions for RNA: ENST00000529402.1

CHORDC1-204, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 3

Gene CHORDC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-204ENST00000529402 KDM5DQ9BY66 1539 aa23.15■■□□□ 1.3
CHORDC1-204ENST00000529402 CROCC2H7BZ55 1655 aa23.14■■□□□ 1.29
CHORDC1-204ENST00000529402 CERKQ8TCT0 537 aa23.14■■□□□ 1.29
CHORDC1-204ENST00000529402 PPP6R1Q9UPN7 881 aa23.13■■□□□ 1.29
CHORDC1-204ENST00000529402 NCKAP5LQ9HCH0 1330 aa23.12■■□□□ 1.29
CHORDC1-204ENST00000529402 ABCC5O15440 1437 aa23.12■■□□□ 1.29
CHORDC1-204ENST00000529402 MROH1Q8NDA8 1641 aa23.11■■□□□ 1.29
CHORDC1-204ENST00000529402 RNF17Q9BXT8 1623 aaKnown RBP23.11■■□□□ 1.29
CHORDC1-204ENST00000529402 PTPRTO14522 1441 aa23.1■■□□□ 1.29
CHORDC1-204ENST00000529402 FGD6Q6ZV73 1430 aa23.1■■□□□ 1.29
CHORDC1-204ENST00000529402 PZPP20742 1482 aa23.1■■□□□ 1.29
CHORDC1-204ENST00000529402 WASHC2CQ9Y4E1 1318 aa23.09■■□□□ 1.29
CHORDC1-204ENST00000529402 DMRT2Q9Y5R5 561 aa23.08■■□□□ 1.29
CHORDC1-204ENST00000529402 CEP152O94986 1710 aa23.08■■□□□ 1.28
CHORDC1-204ENST00000529402 DNMT1P26358 1616 aaKnown RBP23.08■■□□□ 1.28
CHORDC1-204ENST00000529402 TCOF1Q13428 1488 aaKnown RBP23.07■■□□□ 1.28
CHORDC1-204ENST00000529402 TNRQ92752 1358 aa23.07■■□□□ 1.28
CHORDC1-204ENST00000529402 EIF2AK4Q9P2K8 1649 aaKnown RBP23.07■■□□□ 1.28
CHORDC1-204ENST00000529402 ABCC3O15438 1527 aa23.07■■□□□ 1.28
CHORDC1-204ENST00000529402 DAPK1P53355 1430 aa23.07■■□□□ 1.28
CHORDC1-204ENST00000529402 A2ML1A8K2U0 1454 aa23.05■■□□□ 1.28
CHORDC1-204ENST00000529402 FAM135AQ9P2D6 1515 aa23.05■■□□□ 1.28
CHORDC1-204ENST00000529402 RRP7BPQ9NSQ0 103 aa23.05■■□□□ 1.28
CHORDC1-204ENST00000529402 KIF15Q9NS87 1388 aa23.04■■□□□ 1.28
CHORDC1-204ENST00000529402 DUOX2Q9NRD8 1548 aa23.04■■□□□ 1.28
CHORDC1-204ENST00000529402 SHANK2Q9UPX8 1470 aa23.04■■□□□ 1.28
CHORDC1-204ENST00000529402 LTBP4Q8N2S1 1624 aa23.04■■□□□ 1.28
CHORDC1-204ENST00000529402 CFAP65Q6ZU64 1925 aaKnown RBP23.04■■□□□ 1.28
CHORDC1-204ENST00000529402 CHIC2Q9UKJ5 165 aa23.03■■□□□ 1.28
CHORDC1-204ENST00000529402 PLA2R1Q13018 1463 aa23.02■■□□□ 1.28
CHORDC1-204ENST00000529402 ZC3H13Q5T200 1668 aaKnown RBP23■■□□□ 1.27
CHORDC1-204ENST00000529402 ZNF335Q9H4Z2 1342 aaPredicted RBP22.98■■□□□ 1.27
CHORDC1-204ENST00000529402 NEURL4Q96JN8 1562 aa22.97■■□□□ 1.27
CHORDC1-204ENST00000529402 ERVK-7P63135 1459 aa22.96■■□□□ 1.27
CHORDC1-204ENST00000529402 POLR1AO95602 1720 aaPredicted RBP22.95■■□□□ 1.26
CHORDC1-204ENST00000529402 SPATA31D1Q6ZQQ2 1576 aa22.95■■□□□ 1.26
CHORDC1-204ENST00000529402 PPARGC1BQ86YN6 1023 aaKnown RBP22.95■■□□□ 1.26
CHORDC1-204ENST00000529402 PRDM15P57071 1507 aaPredicted RBP22.94■■□□□ 1.26
CHORDC1-204ENST00000529402 ERBINQ96RT1 1412 aa22.94■■□□□ 1.26
CHORDC1-204ENST00000529402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.94■■□□□ 1.26
CHORDC1-204ENST00000529402 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
CHORDC1-204ENST00000529402 PKD2Q13563 968 aa22.93■■□□□ 1.26
CHORDC1-204ENST00000529402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.93■■□□□ 1.26
CHORDC1-204ENST00000529402 DEPDC5O75140 1603 aa22.92■■□□□ 1.26
CHORDC1-204ENST00000529402 UGGT1Q9NYU2 1555 aa22.92■■□□□ 1.26
CHORDC1-204ENST00000529402 NLRP1Q9C000 1473 aa22.91■■□□□ 1.26
CHORDC1-204ENST00000529402 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.26
CHORDC1-204ENST00000529402 ADGRL2O95490 1459 aa22.87■■□□□ 1.25
CHORDC1-204ENST00000529402 UBR1Q8IWV7 1749 aa22.84■■□□□ 1.25
CHORDC1-204ENST00000529402 VWDEQ8N2E2 1590 aa22.84■■□□□ 1.25
CHORDC1-204ENST00000529402 THEMISQ8N1K5 641 aaPredicted RBP22.82■■□□□ 1.24
CHORDC1-204ENST00000529402 ARHGAP31Q2M1Z3 1444 aa22.82■■□□□ 1.24
CHORDC1-204ENST00000529402 ANKLE2Q86XL3 938 aa22.81■■□□□ 1.24
CHORDC1-204ENST00000529402 NPHP4O75161 1426 aaPredicted RBP22.79■■□□□ 1.24
CHORDC1-204ENST00000529402 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
CHORDC1-204ENST00000529402 LMTK2Q8IWU2 1503 aa22.78■■□□□ 1.24
CHORDC1-204ENST00000529402 IQGAP1P46940 1657 aa22.78■■□□□ 1.24
CHORDC1-204ENST00000529402 IQSEC2Q5JU85 1478 aa22.78■■□□□ 1.24
CHORDC1-204ENST00000529402 KANK1Q14678 1352 aa22.77■■□□□ 1.24
CHORDC1-204ENST00000529402 SYNMO15061 1565 aa22.77■■□□□ 1.24
CHORDC1-204ENST00000529402 ANKRD50Q9ULJ7 1429 aa22.77■■□□□ 1.24
CHORDC1-204ENST00000529402 MED14O60244 1454 aa22.77■■□□□ 1.24
CHORDC1-204ENST00000529402 STRCP1A6NGW2 1772 aa22.76■■□□□ 1.23
CHORDC1-204ENST00000529402 EFCAB6Q5THR3 1501 aa22.75■■□□□ 1.23
CHORDC1-204ENST00000529402 ITGAEP38570 1179 aa22.74■■□□□ 1.23
CHORDC1-204ENST00000529402 LTKP29376 864 aa22.73■■□□□ 1.23
CHORDC1-204ENST00000529402 UBAP1LF5GYI3 381 aa22.71■■□□□ 1.23
CHORDC1-204ENST00000529402 ARHGAP23Q9P227 1491 aa22.71■■□□□ 1.23
CHORDC1-204ENST00000529402 SLIT1O75093 1534 aa22.69■■□□□ 1.22
CHORDC1-204ENST00000529402 SCAF11Q99590 1463 aaKnown RBP22.69■■□□□ 1.22
CHORDC1-204ENST00000529402 NOS1P29475 1434 aa22.69■■□□□ 1.22
CHORDC1-204ENST00000529402 IDI1Q13907 227 aa22.69■■□□□ 1.22
CHORDC1-204ENST00000529402 UNC13BO14795 1591 aa22.68■■□□□ 1.22
CHORDC1-204ENST00000529402 CPS1P31327 1500 aa22.67■■□□□ 1.22
CHORDC1-204ENST00000529402 TET3O43151 1660 aa22.66■■□□□ 1.22
CHORDC1-204ENST00000529402 TXNDC2Q86VQ3 553 aa22.66■■□□□ 1.22
CHORDC1-204ENST00000529402 MYO5BQ9ULV0 1848 aa22.65■■□□□ 1.22
CHORDC1-204ENST00000529402 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
CHORDC1-204ENST00000529402 TMEM2Q9UHN6 1383 aa22.63■■□□□ 1.21
CHORDC1-204ENST00000529402 E9PCH4 1651 aa22.62■■□□□ 1.21
CHORDC1-204ENST00000529402 GCC2Q8IWJ2 1684 aa22.62■■□□□ 1.21
CHORDC1-204ENST00000529402 ALKQ9UM73 1620 aa22.62■■□□□ 1.21
CHORDC1-204ENST00000529402 SENP3Q9H4L4 574 aaPredicted RBP22.62■■□□□ 1.21
CHORDC1-204ENST00000529402 STAG3Q9UJ98 1225 aa22.62■■□□□ 1.21
CHORDC1-204ENST00000529402 ADGRB3O60242 1522 aa22.62■■□□□ 1.21
CHORDC1-204ENST00000529402 LRRC7Q96NW7 1537 aa22.6■■□□□ 1.21
CHORDC1-204ENST00000529402 KDM5AP29375 1690 aaKnown RBP22.59■■□□□ 1.21
CHORDC1-204ENST00000529402 PIP4K2BP78356 416 aa22.59■■□□□ 1.21
CHORDC1-204ENST00000529402 IQGAP3Q86VI3 1631 aa22.59■■□□□ 1.21
CHORDC1-204ENST00000529402 SCAF1Q9H7N4 1312 aaKnown RBP22.58■■□□□ 1.21
CHORDC1-204ENST00000529402 RPRD2Q5VT52 1461 aaKnown RBP22.57■■□□□ 1.2
CHORDC1-204ENST00000529402 EID1Q9Y6B2 187 aa22.56■■□□□ 1.2
CHORDC1-204ENST00000529402 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
CHORDC1-204ENST00000529402 RRBP1Q9P2E9 1410 aaKnown RBP22.55■■□□□ 1.2
CHORDC1-204ENST00000529402 NUP155O75694 1391 aa22.53■■□□□ 1.2
CHORDC1-204ENST00000529402 DISP3Q9P2K9 1392 aa22.53■■□□□ 1.2
CHORDC1-204ENST00000529402 TMEM131LA2VDJ0 1609 aa22.53■■□□□ 1.2
CHORDC1-204ENST00000529402 SLC26A8Q96RN1 970 aa22.52■■□□□ 1.2
CHORDC1-204ENST00000529402 SLC52A1Q9NWF4 448 aa22.52■■□□□ 1.2
CHORDC1-204ENST00000529402 HSPA1LP34931 641 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms