RNA–Protein interactions for RNA: ENST00000529324.5

PPP3CA-209, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP3CA, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-209ENST00000529324 NPDC1Q9NQX5 325 aaPredicted RBP11.65□□□□□ -0.54
PPP3CA-209ENST00000529324 MS4A1P11836 297 aa11.6□□□□□ -0.55
PPP3CA-209ENST00000529324 FBXW7Q969H0 707 aa11.6□□□□□ -0.55
PPP3CA-209ENST00000529324 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
PPP3CA-209ENST00000529324 MDM2Q00987 491 aaPredicted RBP11.59□□□□□ -0.55
PPP3CA-209ENST00000529324 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
PPP3CA-209ENST00000529324 CLCN1P35523 988 aa11.58□□□□□ -0.56
PPP3CA-209ENST00000529324 ZMYND15Q9H091 742 aa11.57□□□□□ -0.56
PPP3CA-209ENST00000529324 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
PPP3CA-209ENST00000529324 ZNF454Q8N9F8 522 aa11.56□□□□□ -0.56
PPP3CA-209ENST00000529324 GPCPD1Q9NPB8 672 aa11.56□□□□□ -0.56
PPP3CA-209ENST00000529324 HOMEZQ8IX15 550 aa11.55□□□□□ -0.56
PPP3CA-209ENST00000529324 SP7Q8TDD2 431 aaPredicted RBP11.55□□□□□ -0.56
PPP3CA-209ENST00000529324 PHOX2BQ99453 314 aa11.55□□□□□ -0.56
PPP3CA-209ENST00000529324 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
PPP3CA-209ENST00000529324 FOSBP53539 338 aa11.54□□□□□ -0.56
PPP3CA-209ENST00000529324 PCMTD1Q96MG8 357 aaPredicted RBP11.54□□□□□ -0.56
PPP3CA-209ENST00000529324 C6orf132Q5T0Z8 1188 aa11.53□□□□□ -0.56
PPP3CA-209ENST00000529324 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
PPP3CA-209ENST00000529324 GOPCQ9HD26 462 aa11.53□□□□□ -0.56
PPP3CA-209ENST00000529324 NUDT7P0C024 238 aa11.52□□□□□ -0.57
PPP3CA-209ENST00000529324 CERKQ8TCT0 537 aa11.52□□□□□ -0.57
PPP3CA-209ENST00000529324 ZDHHC16Q969W1 377 aa11.52□□□□□ -0.57
PPP3CA-209ENST00000529324 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
PPP3CA-209ENST00000529324 NLRP7Q8WX94 980 aa11.51□□□□□ -0.57
PPP3CA-209ENST00000529324 KHSRPQ92945 711 aaKnown RBP eCLIP11.51□□□□□ -0.578e-6■■■□□ 18.5
PPP3CA-209ENST00000529324 TMUB1Q9BVT8 246 aa11.51□□□□□ -0.57
PPP3CA-209ENST00000529324 RSPH6AQ9H0K4 717 aa11.51□□□□□ -0.57
PPP3CA-209ENST00000529324 OATP04181 439 aa11.5□□□□□ -0.57
PPP3CA-209ENST00000529324 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
PPP3CA-209ENST00000529324 ARSIQ5FYB1 569 aa11.5□□□□□ -0.57
PPP3CA-209ENST00000529324 METTL3Q86U44 580 aaKnown RBP11.5□□□□□ -0.57
PPP3CA-209ENST00000529324 ATP1B4Q9UN42 357 aaPredicted RBP11.49□□□□□ -0.57
PPP3CA-209ENST00000529324 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
PPP3CA-209ENST00000529324 RIMBP2O15034 1052 aa11.47□□□□□ -0.57
PPP3CA-209ENST00000529324 FLIIQ13045 1269 aa11.47□□□□□ -0.57
PPP3CA-209ENST00000529324 SH3D19Q5HYK7 790 aa11.47□□□□□ -0.57
PPP3CA-209ENST00000529324 BEGAINQ9BUH8 593 aa11.47□□□□□ -0.57
PPP3CA-209ENST00000529324 ADAM33Q9BZ11 813 aa11.47□□□□□ -0.57
PPP3CA-209ENST00000529324 HOXB3P14651 431 aaPredicted RBP11.45□□□□□ -0.58
PPP3CA-209ENST00000529324 PXYLP1Q8TE99 480 aa11.45□□□□□ -0.58
PPP3CA-209ENST00000529324 FAM217BQ9NTX9 383 aaPredicted RBP11.45□□□□□ -0.58
PPP3CA-209ENST00000529324 ZNF710Q8N1W2 664 aa11.44□□□□□ -0.58
PPP3CA-209ENST00000529324 PRSS12P56730 875 aa11.43□□□□□ -0.58
PPP3CA-209ENST00000529324 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
PPP3CA-209ENST00000529324 POTEJP0CG39 1038 aa11.42□□□□□ -0.58
PPP3CA-209ENST00000529324 CDCA7LQ96GN5 454 aa11.42□□□□□ -0.58
PPP3CA-209ENST00000529324 ZSWIM6Q9HCJ5 1215 aa11.42□□□□□ -0.58
PPP3CA-209ENST00000529324 SKIV2LQ15477 1246 aaKnown RBP11.41□□□□□ -0.58
PPP3CA-209ENST00000529324 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
PPP3CA-209ENST00000529324 RBM46Q8TBY0 533 aaKnown RBP11.41□□□□□ -0.58
PPP3CA-209ENST00000529324 GPR153Q6NV75 609 aa11.4□□□□□ -0.58
PPP3CA-209ENST00000529324 POLR3EQ9NVU0 708 aa11.4□□□□□ -0.58
PPP3CA-209ENST00000529324 PPP4R3BQ5MIZ7 849 aa11.39□□□□□ -0.59
PPP3CA-209ENST00000529324 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
PPP3CA-209ENST00000529324 LHX6Q9UPM6 363 aa11.39□□□□□ -0.59
PPP3CA-209ENST00000529324 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
PPP3CA-209ENST00000529324 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
PPP3CA-209ENST00000529324 POTEB2H3BUK9 544 aa11.36□□□□□ -0.59
PPP3CA-209ENST00000529324 COL9A1P20849 921 aa11.35□□□□□ -0.59
PPP3CA-209ENST00000529324 MYSM1Q5VVJ2 828 aa11.35□□□□□ -0.59
PPP3CA-209ENST00000529324 ARID3AQ99856 593 aa11.35□□□□□ -0.59
PPP3CA-209ENST00000529324 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
PPP3CA-209ENST00000529324 FAM198AQ9UFP1 575 aa11.34□□□□□ -0.59
PPP3CA-209ENST00000529324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.33□□□□□ -0.6
PPP3CA-209ENST00000529324 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
PPP3CA-209ENST00000529324 RCCD1A6NED2 376 aa11.33□□□□□ -0.6
PPP3CA-209ENST00000529324 ARID3CA6NKF2 412 aa11.33□□□□□ -0.6
PPP3CA-209ENST00000529324 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
PPP3CA-209ENST00000529324 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
PPP3CA-209ENST00000529324 TBC1D2Q9BYX2 928 aa11.33□□□□□ -0.6
PPP3CA-209ENST00000529324 BCL2L12Q9HB09 334 aa11.33□□□□□ -0.6
PPP3CA-209ENST00000529324 PTPREP23469 700 aa11.32□□□□□ -0.6
PPP3CA-209ENST00000529324 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
PPP3CA-209ENST00000529324 MCM6Q14566 821 aa11.32□□□□□ -0.6
PPP3CA-209ENST00000529324 PPP1R3GB7ZBB8 358 aa11.3□□□□□ -0.6
PPP3CA-209ENST00000529324 APBB1O00213 710 aa11.3□□□□□ -0.6
PPP3CA-209ENST00000529324 C1orf115Q9H7X2 142 aa11.3□□□□□ -0.6
PPP3CA-209ENST00000529324 TSKSQ9UJT2 592 aa11.3□□□□□ -0.6
PPP3CA-209ENST00000529324 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
PPP3CA-209ENST00000529324 NUDT18Q6ZVK8 323 aa11.29□□□□□ -0.6
PPP3CA-209ENST00000529324 EYA1Q99502 592 aa11.29□□□□□ -0.6
PPP3CA-209ENST00000529324 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
PPP3CA-209ENST00000529324 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
PPP3CA-209ENST00000529324 PNMA3Q9UL41 463 aa11.28□□□□□ -0.6
PPP3CA-209ENST00000529324 A6NJR5 290 aa11.27□□□□□ -0.61
PPP3CA-209ENST00000529324 DDX11L8A8MPP1 907 aa11.26□□□□□ -0.61
PPP3CA-209ENST00000529324 DNAJB2P25686 324 aa11.26□□□□□ -0.61
PPP3CA-209ENST00000529324 PACS2Q86VP3 889 aa11.26□□□□□ -0.61
PPP3CA-209ENST00000529324 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
PPP3CA-209ENST00000529324 TRIM6-TRIM34B2RNG4 842 aa11.25□□□□□ -0.61
PPP3CA-209ENST00000529324 C3orf80F5H4A9 247 aa11.25□□□□□ -0.61
PPP3CA-209ENST00000529324 SNPHO15079 494 aa11.25□□□□□ -0.61
PPP3CA-209ENST00000529324 SPIRE2Q8WWL2 714 aa11.25□□□□□ -0.61
PPP3CA-209ENST00000529324 TATDN2Q93075 761 aa11.25□□□□□ -0.61
PPP3CA-209ENST00000529324 TRAK2O60296 914 aa11.24□□□□□ -0.61
PPP3CA-209ENST00000529324 CD46P15529 392 aa11.24□□□□□ -0.61
PPP3CA-209ENST00000529324 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
PPP3CA-209ENST00000529324 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
PPP3CA-209ENST00000529324 LIMD1Q9UGP4 676 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms