RNA–Protein interactions for RNA: ENST00000529229.1

AP003390.2-201, humanhuman

TSL 4 BASIC

Gene AP003390.2, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003390.2-201ENST00000529229 PREX1Q8TCU6 1659 aa17.31■□□□□ 0.36
AP003390.2-201ENST00000529229 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
AP003390.2-201ENST00000529229 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
AP003390.2-201ENST00000529229 LMTK3Q96Q04 1460 aa17.3■□□□□ 0.36
AP003390.2-201ENST00000529229 VWDEQ8N2E2 1590 aa17.29■□□□□ 0.36
AP003390.2-201ENST00000529229 ABCC3O15438 1527 aa17.29■□□□□ 0.36
AP003390.2-201ENST00000529229 CAMSAP1Q5T5Y3 1602 aa17.29■□□□□ 0.36
AP003390.2-201ENST00000529229 FAM50AQ14320 339 aaKnown RBP17.28■□□□□ 0.36
AP003390.2-201ENST00000529229 GCC2Q8IWJ2 1684 aa17.28■□□□□ 0.36
AP003390.2-201ENST00000529229 CNTLNQ9NXG0 1405 aa17.28■□□□□ 0.36
AP003390.2-201ENST00000529229 UNC13BO14795 1591 aa17.27■□□□□ 0.35
AP003390.2-201ENST00000529229 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
AP003390.2-201ENST00000529229 ZNF142P52746 1687 aaPredicted RBP17.25■□□□□ 0.35
AP003390.2-201ENST00000529229 ANKRD30AQ9BXX3 1397 aa17.25■□□□□ 0.35
AP003390.2-201ENST00000529229 ROCK1Q13464 1354 aa17.24■□□□□ 0.35
AP003390.2-201ENST00000529229 KIF3BO15066 747 aa17.23■□□□□ 0.35
AP003390.2-201ENST00000529229 CHIC2Q9UKJ5 165 aa17.23■□□□□ 0.35
AP003390.2-201ENST00000529229 CEBPAP49715 358 aaPredicted RBP17.22■□□□□ 0.35
AP003390.2-201ENST00000529229 RRP7BPQ9NSQ0 103 aa17.22■□□□□ 0.35
AP003390.2-201ENST00000529229 SETD1BQ9UPS6 1966 aaKnown RBP17.22■□□□□ 0.35
AP003390.2-201ENST00000529229 GGT6Q6P531 493 aa17.21■□□□□ 0.35
AP003390.2-201ENST00000529229 PZPP20742 1482 aa17.2■□□□□ 0.34
AP003390.2-201ENST00000529229 ZMYM3Q14202 1370 aa17.2■□□□□ 0.34
AP003390.2-201ENST00000529229 LMTK2Q8IWU2 1503 aa17.2■□□□□ 0.34
AP003390.2-201ENST00000529229 ANKRD50Q9ULJ7 1429 aa17.2■□□□□ 0.34
AP003390.2-201ENST00000529229 NPATQ14207 1427 aa17.19■□□□□ 0.34
AP003390.2-201ENST00000529229 SPATA31D1Q6ZQQ2 1576 aa17.18■□□□□ 0.34
AP003390.2-201ENST00000529229 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
AP003390.2-201ENST00000529229 EFCAB6Q5THR3 1501 aa17.17■□□□□ 0.34
AP003390.2-201ENST00000529229 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
AP003390.2-201ENST00000529229 TET3O43151 1660 aa17.16■□□□□ 0.34
AP003390.2-201ENST00000529229 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
AP003390.2-201ENST00000529229 CFAP65Q6ZU64 1925 aaKnown RBP17.15■□□□□ 0.34
AP003390.2-201ENST00000529229 CEP170BQ9Y4F5 1589 aaPredicted RBP17.15■□□□□ 0.34
AP003390.2-201ENST00000529229 NAIPQ13075 1403 aa17.14■□□□□ 0.33
AP003390.2-201ENST00000529229 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
AP003390.2-201ENST00000529229 E9PCH4 1651 aa17.13■□□□□ 0.33
AP003390.2-201ENST00000529229 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
AP003390.2-201ENST00000529229 HFM1A2PYH4 1435 aa17.12■□□□□ 0.33
AP003390.2-201ENST00000529229 ARHGAP31Q2M1Z3 1444 aa17.12■□□□□ 0.33
AP003390.2-201ENST00000529229 SYNMO15061 1565 aa17.11■□□□□ 0.33
AP003390.2-201ENST00000529229 ITGAEP38570 1179 aa17.11■□□□□ 0.33
AP003390.2-201ENST00000529229 UHRF1BP1Q6BDS2 1440 aa17.11■□□□□ 0.33
AP003390.2-201ENST00000529229 WASHC2CQ9Y4E1 1318 aa17.09■□□□□ 0.33
AP003390.2-201ENST00000529229 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
AP003390.2-201ENST00000529229 FBXO31Q5XUX0 539 aaPredicted RBP17.07■□□□□ 0.32
AP003390.2-201ENST00000529229 ESF1Q9H501 851 aaKnown RBP17.07■□□□□ 0.32
AP003390.2-201ENST00000529229 PIK3C2BO00750 1634 aa17.06■□□□□ 0.32
AP003390.2-201ENST00000529229 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
AP003390.2-201ENST00000529229 HSPA2P54652 639 aa17.05■□□□□ 0.32
AP003390.2-201ENST00000529229 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
AP003390.2-201ENST00000529229 TNRQ92752 1358 aa17.04■□□□□ 0.32
AP003390.2-201ENST00000529229 NOS1P29475 1434 aa17.04■□□□□ 0.32
AP003390.2-201ENST00000529229 RPRD2Q5VT52 1461 aaKnown RBP17.03■□□□□ 0.32
AP003390.2-201ENST00000529229 KDM5AP29375 1690 aaKnown RBP17.02■□□□□ 0.32
AP003390.2-201ENST00000529229 NLRP1Q9C000 1473 aa17.02■□□□□ 0.32
AP003390.2-201ENST00000529229 MYO5BQ9ULV0 1848 aa17.02■□□□□ 0.31
AP003390.2-201ENST00000529229 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.31
AP003390.2-201ENST00000529229 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
AP003390.2-201ENST00000529229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
AP003390.2-201ENST00000529229 KANK1Q14678 1352 aa17.01■□□□□ 0.31
AP003390.2-201ENST00000529229 UGGT1Q9NYU2 1555 aa17■□□□□ 0.31
AP003390.2-201ENST00000529229 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
AP003390.2-201ENST00000529229 ADGRB3O60242 1522 aa16.96■□□□□ 0.3
AP003390.2-201ENST00000529229 NUP155O75694 1391 aa16.95■□□□□ 0.3
AP003390.2-201ENST00000529229 TMEM131LA2VDJ0 1609 aa16.95■□□□□ 0.3
AP003390.2-201ENST00000529229 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
AP003390.2-201ENST00000529229 CLTCL1P53675 1640 aa16.92■□□□□ 0.3
AP003390.2-201ENST00000529229 SLIT1O75093 1534 aa16.92■□□□□ 0.3
AP003390.2-201ENST00000529229 TRPM2O94759 1503 aa16.92■□□□□ 0.3
AP003390.2-201ENST00000529229 PTPRTO14522 1441 aa16.91■□□□□ 0.3
AP003390.2-201ENST00000529229 IQGAP1P46940 1657 aa16.89■□□□□ 0.29
AP003390.2-201ENST00000529229 SETD5Q9C0A6 1442 aa16.88■□□□□ 0.29
AP003390.2-201ENST00000529229 MED14O60244 1454 aa16.87■□□□□ 0.29
AP003390.2-201ENST00000529229 RAB3GAP2Q9H2M9 1393 aa16.87■□□□□ 0.29
AP003390.2-201ENST00000529229 LTBP4Q8N2S1 1624 aa16.85■□□□□ 0.29
AP003390.2-201ENST00000529229 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
AP003390.2-201ENST00000529229 IDI1Q13907 227 aa16.84■□□□□ 0.29
AP003390.2-201ENST00000529229 KIF1BO60333 1816 aa16.83■□□□□ 0.28
AP003390.2-201ENST00000529229 ZFYVE9O95405 1425 aa16.83■□□□□ 0.28
AP003390.2-201ENST00000529229 NCKAP5LQ9HCH0 1330 aa16.83■□□□□ 0.28
AP003390.2-201ENST00000529229 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
AP003390.2-201ENST00000529229 TMEM2Q9UHN6 1383 aa16.8■□□□□ 0.28
AP003390.2-201ENST00000529229 IFT172Q9UG01 1749 aa16.79■□□□□ 0.28
AP003390.2-201ENST00000529229 NRXN3Q9Y4C0 1643 aa16.79■□□□□ 0.28
AP003390.2-201ENST00000529229 SLC52A1Q9NWF4 448 aa16.78■□□□□ 0.28
AP003390.2-201ENST00000529229 NEXMIFQ5QGS0 1516 aa16.78■□□□□ 0.28
AP003390.2-201ENST00000529229 NPHP4O75161 1426 aaPredicted RBP16.78■□□□□ 0.28
AP003390.2-201ENST00000529229 PKD2Q13563 968 aa16.77■□□□□ 0.28
AP003390.2-201ENST00000529229 THEMISQ8N1K5 641 aaPredicted RBP16.77■□□□□ 0.28
AP003390.2-201ENST00000529229 PPLO60437 1756 aa16.77■□□□□ 0.27
AP003390.2-201ENST00000529229 LTKP29376 864 aa16.76■□□□□ 0.27
AP003390.2-201ENST00000529229 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
AP003390.2-201ENST00000529229 SETD1AO15047 1707 aaKnown RBP16.74■□□□□ 0.27
AP003390.2-201ENST00000529229 FOXD1Q16676 465 aa16.74■□□□□ 0.27
AP003390.2-201ENST00000529229 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
AP003390.2-201ENST00000529229 XIRP1Q702N8 1843 aaKnown RBP16.73■□□□□ 0.27
AP003390.2-201ENST00000529229 MPHOSPH9Q99550 1183 aa16.73■□□□□ 0.27
AP003390.2-201ENST00000529229 RIMS2Q9UQ26 1411 aa16.72■□□□□ 0.27
AP003390.2-201ENST00000529229 NWD1Q149M9 1564 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms