RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 CAMSAP1Q5T5Y3 1602 aa20.38■□□□□ 0.85
SSH3-206ENST00000529224 ZNF142P52746 1687 aaPredicted RBP20.38■□□□□ 0.85
SSH3-206ENST00000529224 FGD6Q6ZV73 1430 aa20.37■□□□□ 0.85
SSH3-206ENST00000529224 KIF3BO15066 747 aa20.36■□□□□ 0.85
SSH3-206ENST00000529224 CEP170BQ9Y4F5 1589 aaPredicted RBP20.35■□□□□ 0.85
SSH3-206ENST00000529224 FAM135AQ9P2D6 1515 aa20.34■□□□□ 0.85
SSH3-206ENST00000529224 TCOF1Q13428 1488 aaKnown RBP20.34■□□□□ 0.85
SSH3-206ENST00000529224 SHANK2Q9UPX8 1470 aa20.33■□□□□ 0.85
SSH3-206ENST00000529224 DNMT1P26358 1616 aaKnown RBP20.33■□□□□ 0.84
SSH3-206ENST00000529224 EIF2AK4Q9P2K8 1649 aaKnown RBP20.33■□□□□ 0.84
SSH3-206ENST00000529224 KDM5DQ9BY66 1539 aa20.32■□□□□ 0.84
SSH3-206ENST00000529224 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
SSH3-206ENST00000529224 ABCC5O15440 1437 aa20.31■□□□□ 0.84
SSH3-206ENST00000529224 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
SSH3-206ENST00000529224 NCKAP5LQ9HCH0 1330 aa20.29■□□□□ 0.84
SSH3-206ENST00000529224 DAPK1P53355 1430 aa20.29■□□□□ 0.84
SSH3-206ENST00000529224 DUOX2Q9NRD8 1548 aa20.29■□□□□ 0.84
SSH3-206ENST00000529224 PLA2R1Q13018 1463 aa20.29■□□□□ 0.84
SSH3-206ENST00000529224 A2ML1A8K2U0 1454 aa20.27■□□□□ 0.84
SSH3-206ENST00000529224 PZPP20742 1482 aa20.27■□□□□ 0.84
SSH3-206ENST00000529224 FBXO31Q5XUX0 539 aaPredicted RBP20.27■□□□□ 0.84
SSH3-206ENST00000529224 WASHC2CQ9Y4E1 1318 aa20.26■□□□□ 0.83
SSH3-206ENST00000529224 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
SSH3-206ENST00000529224 KIF15Q9NS87 1388 aa20.25■□□□□ 0.83
SSH3-206ENST00000529224 CFAP65Q6ZU64 1925 aaKnown RBP20.25■□□□□ 0.83
SSH3-206ENST00000529224 TNRQ92752 1358 aa20.24■□□□□ 0.83
SSH3-206ENST00000529224 PKD2Q13563 968 aa20.22■□□□□ 0.83
SSH3-206ENST00000529224 MROH1Q8NDA8 1641 aa20.22■□□□□ 0.83
SSH3-206ENST00000529224 ABCC3O15438 1527 aa20.22■□□□□ 0.83
SSH3-206ENST00000529224 CEP152O94986 1710 aa20.22■□□□□ 0.83
SSH3-206ENST00000529224 ERBINQ96RT1 1412 aa20.21■□□□□ 0.83
SSH3-206ENST00000529224 RRP7BPQ9NSQ0 103 aa20.21■□□□□ 0.83
SSH3-206ENST00000529224 ANKRD30AQ9BXX3 1397 aa20.21■□□□□ 0.83
SSH3-206ENST00000529224 FAM50AQ14320 339 aaKnown RBP20.2■□□□□ 0.82
SSH3-206ENST00000529224 ZNF335Q9H4Z2 1342 aaPredicted RBP20.2■□□□□ 0.82
SSH3-206ENST00000529224 IQSEC2Q5JU85 1478 aa20.18■□□□□ 0.82
SSH3-206ENST00000529224 NEURL4Q96JN8 1562 aa20.17■□□□□ 0.82
SSH3-206ENST00000529224 CHIC2Q9UKJ5 165 aa20.17■□□□□ 0.82
SSH3-206ENST00000529224 ADGRL2O95490 1459 aa20.17■□□□□ 0.82
SSH3-206ENST00000529224 PRDM15P57071 1507 aaPredicted RBP20.17■□□□□ 0.82
SSH3-206ENST00000529224 DEPDC5O75140 1603 aa20.16■□□□□ 0.82
SSH3-206ENST00000529224 POLR1AO95602 1720 aaPredicted RBP20.16■□□□□ 0.82
SSH3-206ENST00000529224 DISP3Q9P2K9 1392 aa20.15■□□□□ 0.82
SSH3-206ENST00000529224 SPATA31D1Q6ZQQ2 1576 aa20.14■□□□□ 0.81
SSH3-206ENST00000529224 NLRP1Q9C000 1473 aa20.14■□□□□ 0.81
SSH3-206ENST00000529224 UGGT1Q9NYU2 1555 aa20.12■□□□□ 0.81
SSH3-206ENST00000529224 ERVK-7P63135 1459 aa20.11■□□□□ 0.81
SSH3-206ENST00000529224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.11■□□□□ 0.81
SSH3-206ENST00000529224 KANK1Q14678 1352 aa20.09■□□□□ 0.81
SSH3-206ENST00000529224 PPARGC1BQ86YN6 1023 aaKnown RBP20.09■□□□□ 0.81
SSH3-206ENST00000529224 ILDR2Q71H61 639 aa20.08■□□□□ 0.81
SSH3-206ENST00000529224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
SSH3-206ENST00000529224 THEMISQ8N1K5 641 aaPredicted RBP20.07■□□□□ 0.8
SSH3-206ENST00000529224 ARHGAP31Q2M1Z3 1444 aa20.06■□□□□ 0.8
SSH3-206ENST00000529224 VWDEQ8N2E2 1590 aa20.05■□□□□ 0.8
SSH3-206ENST00000529224 ANKRD50Q9ULJ7 1429 aa20.05■□□□□ 0.8
SSH3-206ENST00000529224 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
SSH3-206ENST00000529224 MED14O60244 1454 aa20.05■□□□□ 0.8
SSH3-206ENST00000529224 LMTK2Q8IWU2 1503 aa20.04■□□□□ 0.8
SSH3-206ENST00000529224 NPHP4O75161 1426 aaPredicted RBP20.03■□□□□ 0.8
SSH3-206ENST00000529224 UBR1Q8IWV7 1749 aa20.03■□□□□ 0.8
SSH3-206ENST00000529224 UBAP1LF5GYI3 381 aa20.03■□□□□ 0.8
SSH3-206ENST00000529224 ROCK1Q13464 1354 aa20.03■□□□□ 0.8
SSH3-206ENST00000529224 IQGAP1P46940 1657 aa20.01■□□□□ 0.79
SSH3-206ENST00000529224 CPS1P31327 1500 aa20■□□□□ 0.79
SSH3-206ENST00000529224 EFCAB6Q5THR3 1501 aa19.98■□□□□ 0.79
SSH3-206ENST00000529224 UNC13BO14795 1591 aa19.98■□□□□ 0.79
SSH3-206ENST00000529224 ITGAEP38570 1179 aa19.97■□□□□ 0.79
SSH3-206ENST00000529224 TET3O43151 1660 aa19.97■□□□□ 0.79
SSH3-206ENST00000529224 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
SSH3-206ENST00000529224 RRBP1Q9P2E9 1410 aaKnown RBP19.96■□□□□ 0.79
SSH3-206ENST00000529224 PIK3C2BO00750 1634 aa19.95■□□□□ 0.78
SSH3-206ENST00000529224 ARHGAP23Q9P227 1491 aa19.95■□□□□ 0.78
SSH3-206ENST00000529224 SOCS7O14512 581 aa19.95■□□□□ 0.78
SSH3-206ENST00000529224 STRCP1A6NGW2 1772 aa19.94■□□□□ 0.78
SSH3-206ENST00000529224 SLIT1O75093 1534 aa19.94■□□□□ 0.78
SSH3-206ENST00000529224 KDM5AP29375 1690 aaKnown RBP19.93■□□□□ 0.78
SSH3-206ENST00000529224 RPRD2Q5VT52 1461 aaKnown RBP19.92■□□□□ 0.78
SSH3-206ENST00000529224 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
SSH3-206ENST00000529224 SYNMO15061 1565 aa19.92■□□□□ 0.78
SSH3-206ENST00000529224 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
SSH3-206ENST00000529224 LTKP29376 864 aa19.91■□□□□ 0.78
SSH3-206ENST00000529224 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
SSH3-206ENST00000529224 NOS1P29475 1434 aa19.9■□□□□ 0.78
SSH3-206ENST00000529224 ALKQ9UM73 1620 aa19.9■□□□□ 0.78
SSH3-206ENST00000529224 PIP4K2BP78356 416 aa19.89■□□□□ 0.77
SSH3-206ENST00000529224 LRRC7Q96NW7 1537 aa19.87■□□□□ 0.77
SSH3-206ENST00000529224 TXNDC2Q86VQ3 553 aa19.87■□□□□ 0.77
SSH3-206ENST00000529224 E9PCH4 1651 aa19.87■□□□□ 0.77
SSH3-206ENST00000529224 TMEM2Q9UHN6 1383 aa19.86■□□□□ 0.77
SSH3-206ENST00000529224 IDI1Q13907 227 aa19.86■□□□□ 0.77
SSH3-206ENST00000529224 STAG3Q9UJ98 1225 aa19.86■□□□□ 0.77
SSH3-206ENST00000529224 MYO5BQ9ULV0 1848 aa19.86■□□□□ 0.77
SSH3-206ENST00000529224 TOM1O60784 492 aa19.85■□□□□ 0.77
SSH3-206ENST00000529224 SLC52A1Q9NWF4 448 aa19.84■□□□□ 0.77
SSH3-206ENST00000529224 NUP155O75694 1391 aa19.83■□□□□ 0.77
SSH3-206ENST00000529224 ADGRB3O60242 1522 aa19.83■□□□□ 0.77
SSH3-206ENST00000529224 HSPA1LP34931 641 aa19.82■□□□□ 0.76
SSH3-206ENST00000529224 EID1Q9Y6B2 187 aa19.82■□□□□ 0.76
SSH3-206ENST00000529224 NAIPQ13075 1403 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms