RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 GTF3C3Q9Y5Q9 886 aa9.61□□□□□ -0.87
ATPAF1-209ENST00000529214 SYCP2Q9BX26 1530 aa9.61□□□□□ -0.87
ATPAF1-209ENST00000529214 KDM5CP41229 1560 aa9.61□□□□□ -0.87
ATPAF1-209ENST00000529214 KDM4FA0A1W2PPD8 638 aa9.6□□□□□ -0.87
ATPAF1-209ENST00000529214 TSPY4P0CV99 314 aa9.6□□□□□ -0.87
ATPAF1-209ENST00000529214 TSPY10P0CW01 314 aa9.6□□□□□ -0.87
ATPAF1-209ENST00000529214 CAMSAP2Q08AD1 1489 aa9.6□□□□□ -0.87
ATPAF1-209ENST00000529214 HAX1O00165 279 aa9.59□□□□□ -0.87
ATPAF1-209ENST00000529214 PIP4P2Q8N4L2 257 aa9.59□□□□□ -0.87
ATPAF1-209ENST00000529214 ATP10AO60312 1499 aa9.59□□□□□ -0.87
ATPAF1-209ENST00000529214 FGD6Q6ZV73 1430 aa9.59□□□□□ -0.87
ATPAF1-209ENST00000529214 ZFYVE16Q7Z3T8 1539 aa9.59□□□□□ -0.87
ATPAF1-209ENST00000529214 ARID4BQ4LE39 1312 aaPredicted RBP9.58□□□□□ -0.88
ATPAF1-209ENST00000529214 KDM2AQ9Y2K7 1162 aa9.58□□□□□ -0.88
ATPAF1-209ENST00000529214 RTEL1-TNFRSF6BF6WH68 1400 aa9.57□□□□□ -0.88
ATPAF1-209ENST00000529214 TCOF1Q13428 1488 aaKnown RBP9.56□□□□□ -0.88
ATPAF1-209ENST00000529214 CCDC141Q6ZP82 1450 aa9.56□□□□□ -0.88
ATPAF1-209ENST00000529214 ARHGEF40Q8TER5 1519 aa9.56□□□□□ -0.88
ATPAF1-209ENST00000529214 FAM50AQ14320 339 aaKnown RBP9.56□□□□□ -0.88
ATPAF1-209ENST00000529214 C9orf84Q5VXU9 1444 aa9.56□□□□□ -0.88
ATPAF1-209ENST00000529214 ARHGEF5Q12774 1597 aa9.56□□□□□ -0.88
ATPAF1-209ENST00000529214 HECW2Q9P2P5 1572 aa9.56□□□□□ -0.88
ATPAF1-209ENST00000529214 KIDINS220Q9ULH0 1771 aa9.56□□□□□ -0.88
ATPAF1-209ENST00000529214 ABCC5O15440 1437 aa9.55□□□□□ -0.88
ATPAF1-209ENST00000529214 PTPN23Q9H3S7 1636 aa9.55□□□□□ -0.88
ATPAF1-209ENST00000529214 ATP7AQ04656 1500 aa9.54□□□□□ -0.88
ATPAF1-209ENST00000529214 DIP2CQ9Y2E4 1556 aa9.54□□□□□ -0.88
ATPAF1-209ENST00000529214 MLECQ14165 292 aa9.53□□□□□ -0.88
ATPAF1-209ENST00000529214 DHX29Q7Z478 1369 aaKnown RBP9.53□□□□□ -0.88
ATPAF1-209ENST00000529214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.53□□□□□ -0.88
ATPAF1-209ENST00000529214 ABCA6Q8N139 1617 aa9.53□□□□□ -0.88
ATPAF1-209ENST00000529214 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
ATPAF1-209ENST00000529214 REREQ9P2R6 1566 aa9.52□□□□□ -0.88
ATPAF1-209ENST00000529214 DAPK1P53355 1430 aa9.52□□□□□ -0.89
ATPAF1-209ENST00000529214 A2MP01023 1474 aa9.52□□□□□ -0.89
ATPAF1-209ENST00000529214 REM2Q8IYK8 340 aaPredicted RBP9.52□□□□□ -0.89
ATPAF1-209ENST00000529214 CHIC2Q9UKJ5 165 aa9.52□□□□□ -0.89
ATPAF1-209ENST00000529214 INO80Q9ULG1 1556 aaPredicted RBP9.52□□□□□ -0.89
ATPAF1-209ENST00000529214 AGLP35573 1532 aa9.51□□□□□ -0.89
ATPAF1-209ENST00000529214 RRP7BPQ9NSQ0 103 aa9.51□□□□□ -0.89
ATPAF1-209ENST00000529214 SIGLEC1Q9BZZ2 1709 aa9.51□□□□□ -0.89
ATPAF1-209ENST00000529214 MAST1Q9Y2H9 1570 aa9.5□□□□□ -0.89
ATPAF1-209ENST00000529214 KIF3BO15066 747 aa9.5□□□□□ -0.89
ATPAF1-209ENST00000529214 RRBP1Q9P2E9 1410 aaKnown RBP9.5□□□□□ -0.89
ATPAF1-209ENST00000529214 DNMT1P26358 1616 aaKnown RBP9.5□□□□□ -0.89
ATPAF1-209ENST00000529214 GGT6Q6P531 493 aa9.49□□□□□ -0.89
ATPAF1-209ENST00000529214 NCOA1Q15788 1441 aa9.49□□□□□ -0.89
ATPAF1-209ENST00000529214 SHANK2Q9UPX8 1470 aa9.49□□□□□ -0.89
ATPAF1-209ENST00000529214 BCORL1Q5H9F3 1711 aa9.49□□□□□ -0.89
ATPAF1-209ENST00000529214 ITGAEP38570 1179 aa9.48□□□□□ -0.89
ATPAF1-209ENST00000529214 FBXO3Q9UK99 471 aa9.48□□□□□ -0.89
ATPAF1-209ENST00000529214 ANKRD30AQ9BXX3 1397 aa9.48□□□□□ -0.89
ATPAF1-209ENST00000529214 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
ATPAF1-209ENST00000529214 ADAMTSL3P82987 1691 aa9.48□□□□□ -0.89
ATPAF1-209ENST00000529214 PLXNC1O60486 1568 aa9.47□□□□□ -0.89
ATPAF1-209ENST00000529214 ZBTB12Q9Y330 459 aaPredicted RBP9.47□□□□□ -0.89
ATPAF1-209ENST00000529214 ADGBQ8N7X0 1667 aa9.47□□□□□ -0.89
ATPAF1-209ENST00000529214 KIF15Q9NS87 1388 aa9.47□□□□□ -0.89
ATPAF1-209ENST00000529214 ESF1Q9H501 851 aaKnown RBP9.47□□□□□ -0.89
ATPAF1-209ENST00000529214 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.47□□□□□ -0.89
ATPAF1-209ENST00000529214 FXR2P51116 673 aaKnown RBP eCLIP9.46□□□□□ -0.9
ATPAF1-209ENST00000529214 ADGRL2O95490 1459 aa9.45□□□□□ -0.9
ATPAF1-209ENST00000529214 PTPRMP28827 1452 aa9.45□□□□□ -0.9
ATPAF1-209ENST00000529214 CEBPAP49715 358 aaPredicted RBP9.45□□□□□ -0.9
ATPAF1-209ENST00000529214 DUOX2Q9NRD8 1548 aa9.45□□□□□ -0.9
ATPAF1-209ENST00000529214 ROCK1Q13464 1354 aa9.44□□□□□ -0.9
ATPAF1-209ENST00000529214 CROCC2H7BZ55 1655 aa9.44□□□□□ -0.9
ATPAF1-209ENST00000529214 MADDQ8WXG6 1647 aa9.44□□□□□ -0.9
ATPAF1-209ENST00000529214 WASHC2CQ9Y4E1 1318 aa9.43□□□□□ -0.9
ATPAF1-209ENST00000529214 ERBINQ96RT1 1412 aa9.43□□□□□ -0.9
ATPAF1-209ENST00000529214 CNTLNQ9NXG0 1405 aa9.43□□□□□ -0.9
ATPAF1-209ENST00000529214 ZMYM3Q14202 1370 aa9.43□□□□□ -0.9
ATPAF1-209ENST00000529214 TMEM132AQ24JP5 1023 aa9.42□□□□□ -0.9
ATPAF1-209ENST00000529214 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
ATPAF1-209ENST00000529214 ANKRD50Q9ULJ7 1429 aa9.41□□□□□ -0.9
ATPAF1-209ENST00000529214 EIF5BO60841 1220 aaKnown RBP9.4□□□□□ -0.9
ATPAF1-209ENST00000529214 RIMS1Q86UR5 1692 aaKnown RBP9.4□□□□□ -0.9
ATPAF1-209ENST00000529214 BBXQ8WY36 941 aaPredicted RBP9.4□□□□□ -0.91
ATPAF1-209ENST00000529214 FER1L4A9Z1Z3 1794 aa9.39□□□□□ -0.91
ATPAF1-209ENST00000529214 EIF2AK4Q9P2K8 1649 aaKnown RBP9.39□□□□□ -0.91
ATPAF1-209ENST00000529214 PAXIP1Q6ZW49 1069 aaPredicted RBP9.38□□□□□ -0.91
ATPAF1-209ENST00000529214 RNF17Q9BXT8 1623 aaKnown RBP9.37□□□□□ -0.91
ATPAF1-209ENST00000529214 FBXO31Q5XUX0 539 aaPredicted RBP9.37□□□□□ -0.91
ATPAF1-209ENST00000529214 C14orf37Q86TY3 774 aa9.37□□□□□ -0.91
ATPAF1-209ENST00000529214 KANK1Q14678 1352 aa9.37□□□□□ -0.91
ATPAF1-209ENST00000529214 FAM135AQ9P2D6 1515 aa9.37□□□□□ -0.91
ATPAF1-209ENST00000529214 NAIPQ13075 1403 aa9.37□□□□□ -0.91
ATPAF1-209ENST00000529214 EVX2Q03828 476 aa9.36□□□□□ -0.91
ATPAF1-209ENST00000529214 MROH1Q8NDA8 1641 aa9.36□□□□□ -0.91
ATPAF1-209ENST00000529214 KDM5DQ9BY66 1539 aa9.36□□□□□ -0.91
ATPAF1-209ENST00000529214 CLTCQ00610 1675 aaKnown RBP9.36□□□□□ -0.91
ATPAF1-209ENST00000529214 PKD2Q13563 968 aa9.35□□□□□ -0.91
ATPAF1-209ENST00000529214 NBR1Q14596 966 aa9.35□□□□□ -0.91
ATPAF1-209ENST00000529214 CFAP44Q96MT7 982 aa9.35□□□□□ -0.91
ATPAF1-209ENST00000529214 HFM1A2PYH4 1435 aa9.35□□□□□ -0.91
ATPAF1-209ENST00000529214 NPATQ14207 1427 aa9.35□□□□□ -0.91
ATPAF1-209ENST00000529214 MROH2AA6NES4 1674 aa9.35□□□□□ -0.91
ATPAF1-209ENST00000529214 C3P01024 1663 aa9.35□□□□□ -0.91
ATPAF1-209ENST00000529214 ABCC3O15438 1527 aa9.34□□□□□ -0.91
ATPAF1-209ENST00000529214 DEPDC5O75140 1603 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms