RNA–Protein interactions for RNA: ENST00000529098.5

PDZD3-210, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,532 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-210ENST00000529098 NUP160Q12769 1436 aa23.53■■□□□ 1.36
PDZD3-210ENST00000529098 CRBNQ96SW2 442 aa23.52■■□□□ 1.36
PDZD3-210ENST00000529098 RRAGDQ9NQL2 400 aaPredicted RBP23.52■■□□□ 1.36
PDZD3-210ENST00000529098 JPH4Q96JJ6 628 aa23.51■■□□□ 1.35
PDZD3-210ENST00000529098 KDM2BQ8NHM5 1336 aa23.51■■□□□ 1.35
PDZD3-210ENST00000529098 MBD5Q9P267 1494 aa23.49■■□□□ 1.35
PDZD3-210ENST00000529098 C8orf34Q49A92 452 aa23.49■■□□□ 1.35
PDZD3-210ENST00000529098 L1TD1Q5T7N2 865 aaKnown RBP23.49■■□□□ 1.35
PDZD3-210ENST00000529098 ZMYND15Q9H091 742 aa23.49■■□□□ 1.35
PDZD3-210ENST00000529098 CENPQQ7L2Z9 268 aaPredicted RBP23.48■■□□□ 1.35
PDZD3-210ENST00000529098 PLIN1O60240 522 aa23.47■■□□□ 1.35
PDZD3-210ENST00000529098 KDM5CP41229 1560 aa23.47■■□□□ 1.35
PDZD3-210ENST00000529098 VSIG10Q8N0Z9 540 aa23.46■■□□□ 1.35
PDZD3-210ENST00000529098 NUP153P49790 1475 aaKnown RBP23.45■■□□□ 1.34
PDZD3-210ENST00000529098 PLB1Q6P1J6 1458 aa23.43■■□□□ 1.34
PDZD3-210ENST00000529098 RAPGEF6Q8TEU7 1601 aa23.43■■□□□ 1.34
PDZD3-210ENST00000529098 ROCK1Q13464 1354 aa23.43■■□□□ 1.34
PDZD3-210ENST00000529098 CDCA7LQ96GN5 454 aa23.42■■□□□ 1.34
PDZD3-210ENST00000529098 RRP9O43818 475 aaKnown RBP23.42■■□□□ 1.34
PDZD3-210ENST00000529098 KIF14Q15058 1648 aa23.42■■□□□ 1.34
PDZD3-210ENST00000529098 SLC4A1APQ9BWU0 796 aaKnown RBP23.41■■□□□ 1.34
PDZD3-210ENST00000529098 POGKQ9P215 609 aa23.41■■□□□ 1.34
PDZD3-210ENST00000529098 NLRP13Q86W25 1043 aa23.4■■□□□ 1.34
PDZD3-210ENST00000529098 INSRP06213 1382 aa23.39■■□□□ 1.34
PDZD3-210ENST00000529098 CHD1O14646 1710 aa23.39■■□□□ 1.33
PDZD3-210ENST00000529098 HSP90AA2PQ14568 343 aaPredicted RBP23.39■■□□□ 1.33
PDZD3-210ENST00000529098 CARMIL2Q6F5E8 1435 aa23.38■■□□□ 1.33
PDZD3-210ENST00000529098 HSP90AA1P07900 732 aaKnown RBP23.36■■□□□ 1.33
PDZD3-210ENST00000529098 NAP1L5Q96NT1 182 aaPredicted RBP23.35■■□□□ 1.33
PDZD3-210ENST00000529098 PNNQ9H307 717 aaKnown RBP23.35■■□□□ 1.33
PDZD3-210ENST00000529098 ZMYM4Q5VZL5 1548 aa23.35■■□□□ 1.33
PDZD3-210ENST00000529098 CLCN1P35523 988 aa23.34■■□□□ 1.33
PDZD3-210ENST00000529098 PARD3Q8TEW0 1356 aa23.33■■□□□ 1.32
PDZD3-210ENST00000529098 C20orf194Q5TEA3 1177 aa23.32■■□□□ 1.32
PDZD3-210ENST00000529098 PLEKHH2Q8IVE3 1493 aa23.32■■□□□ 1.32
PDZD3-210ENST00000529098 ZNF326Q5BKZ1 582 aaKnown RBP23.31■■□□□ 1.32
PDZD3-210ENST00000529098 RALGAPBQ86X10 1494 aa23.31■■□□□ 1.32
PDZD3-210ENST00000529098 BLMP54132 1417 aaPredicted RBP23.31■■□□□ 1.32
PDZD3-210ENST00000529098 UHRF1BP1Q6BDS2 1440 aa23.31■■□□□ 1.32
PDZD3-210ENST00000529098 E9PCH4 1651 aa23.31■■□□□ 1.32
PDZD3-210ENST00000529098 DAPK1P53355 1430 aa23.3■■□□□ 1.32
PDZD3-210ENST00000529098 PRG4Q92954 1404 aaPredicted RBP23.3■■□□□ 1.32
PDZD3-210ENST00000529098 PZPP20742 1482 aa23.27■■□□□ 1.32
PDZD3-210ENST00000529098 BECN1Q14457 450 aa23.27■■□□□ 1.32
PDZD3-210ENST00000529098 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
PDZD3-210ENST00000529098 KIAA1107Q9UPP5 1409 aa23.24■■□□□ 1.31
PDZD3-210ENST00000529098 XRCC6P12956 609 aaKnown RBP eCLIP23.23■■□□□ 1.31
PDZD3-210ENST00000529098 RGS3P49796 1198 aa23.23■■□□□ 1.31
PDZD3-210ENST00000529098 ABCC5O15440 1437 aa23.23■■□□□ 1.31
PDZD3-210ENST00000529098 ZNF644Q9H582 1327 aaPredicted RBP23.23■■□□□ 1.31
PDZD3-210ENST00000529098 GOLGA6L3A6NEY3 463 aa23.23■■□□□ 1.31
PDZD3-210ENST00000529098 USP19O94966 1318 aa23.23■■□□□ 1.31
PDZD3-210ENST00000529098 FSD2A1L4K1 749 aa23.22■■□□□ 1.31
PDZD3-210ENST00000529098 DNMT1P26358 1616 aaKnown RBP23.22■■□□□ 1.31
PDZD3-210ENST00000529098 ABCA8O94911 1581 aa23.21■■□□□ 1.31
PDZD3-210ENST00000529098 ST20-MTHFSA0A0A6YYL1 179 aa23.21■■□□□ 1.31
PDZD3-210ENST00000529098 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.2■■□□□ 1.3
PDZD3-210ENST00000529098 TROQ12816 1431 aaPredicted RBP23.2■■□□□ 1.3
PDZD3-210ENST00000529098 ANTXR1Q9H6X2 564 aa23.18■■□□□ 1.3
PDZD3-210ENST00000529098 PTPRGP23470 1445 aa23.18■■□□□ 1.3
PDZD3-210ENST00000529098 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
PDZD3-210ENST00000529098 VIRMAQ69YN4 1812 aaKnown RBP23.17■■□□□ 1.3
PDZD3-210ENST00000529098 ATP10BO94823 1461 aa23.16■■□□□ 1.3
PDZD3-210ENST00000529098 SLKQ9H2G2 1235 aaPredicted RBP23.16■■□□□ 1.3
PDZD3-210ENST00000529098 ARHGEF12Q9NZN5 1544 aa23.15■■□□□ 1.3
PDZD3-210ENST00000529098 PER1O15534 1290 aaPredicted RBP23.13■■□□□ 1.29
PDZD3-210ENST00000529098 SHROOM2Q13796 1616 aa23.12■■□□□ 1.29
PDZD3-210ENST00000529098 DUSP27Q5VZP5 1158 aa23.11■■□□□ 1.29
PDZD3-210ENST00000529098 EIF3AQ14152 1382 aaKnown RBP23.11■■□□□ 1.29
PDZD3-210ENST00000529098 PANK2Q9BZ23 570 aa23.1■■□□□ 1.29
PDZD3-210ENST00000529098 PLEKHD1A6NEE1 506 aa23.1■■□□□ 1.29
PDZD3-210ENST00000529098 PKD2Q13563 968 aa23.1■■□□□ 1.29
PDZD3-210ENST00000529098 ZNF777Q9ULD5 760 aaPredicted RBP23.1■■□□□ 1.29
PDZD3-210ENST00000529098 CFDP1Q9UEE9 299 aaPredicted RBP23.09■■□□□ 1.29
PDZD3-210ENST00000529098 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.29
PDZD3-210ENST00000529098 MRE11P49959 708 aa23.08■■□□□ 1.29
PDZD3-210ENST00000529098 MAPK8IP3Q9UPT6 1336 aa23.07■■□□□ 1.28
PDZD3-210ENST00000529098 ARXQ96QS3 562 aa23.07■■□□□ 1.28
PDZD3-210ENST00000529098 NLRP1Q9C000 1473 aa23.06■■□□□ 1.28
PDZD3-210ENST00000529098 ADCY10Q96PN6 1610 aa23.06■■□□□ 1.28
PDZD3-210ENST00000529098 SEC24BO95487 1268 aa23.06■■□□□ 1.28
PDZD3-210ENST00000529098 CENPJQ9HC77 1338 aaPredicted RBP23.06■■□□□ 1.28
PDZD3-210ENST00000529098 TPM2P07951 284 aa23.05■■□□□ 1.28
PDZD3-210ENST00000529098 MCM4P33991 863 aa23.05■■□□□ 1.28
PDZD3-210ENST00000529098 ESPNB1AK53 854 aa23.04■■□□□ 1.28
PDZD3-210ENST00000529098 CAMSAP2Q08AD1 1489 aa23.03■■□□□ 1.28
PDZD3-210ENST00000529098 PDCL3Q9H2J4 239 aa23.03■■□□□ 1.28
PDZD3-210ENST00000529098 ZNF521Q96K83 1311 aa23.02■■□□□ 1.28
PDZD3-210ENST00000529098 GOLGA2Q08379 1002 aa23.02■■□□□ 1.28
PDZD3-210ENST00000529098 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
PDZD3-210ENST00000529098 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.27
PDZD3-210ENST00000529098 PODXL2Q9NZ53 605 aa23.02■■□□□ 1.27
PDZD3-210ENST00000529098 ISY1Q9ULR0 285 aaKnown RBP23.02■■□□□ 1.27
PDZD3-210ENST00000529098 PLEKHH1Q9ULM0 1364 aa23.01■■□□□ 1.27
PDZD3-210ENST00000529098 ITSN2Q9NZM3 1697 aa23.01■■□□□ 1.27
PDZD3-210ENST00000529098 MYH16Q9H6N6 1097 aa23.01■■□□□ 1.27
PDZD3-210ENST00000529098 ADAMTS8Q9UP79 889 aa23.01■■□□□ 1.27
PDZD3-210ENST00000529098 TBC1D2Q9BYX2 928 aa23■■□□□ 1.27
PDZD3-210ENST00000529098 GZF1Q9H116 711 aaPredicted RBP23■■□□□ 1.27
PDZD3-210ENST00000529098 UPF2Q9HAU5 1272 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms