RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 A2MP01023 1474 aa9.86□□□□□ -0.83
NUP98-215ENST00000529063 PTPRKQ15262 1439 aa9.86□□□□□ -0.83
NUP98-215ENST00000529063 KIAA1107Q9UPP5 1409 aa9.86□□□□□ -0.83
NUP98-215ENST00000529063 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
NUP98-215ENST00000529063 DISP3Q9P2K9 1392 aa9.86□□□□□ -0.83
NUP98-215ENST00000529063 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
NUP98-215ENST00000529063 SPAG9O60271 1321 aaKnown RBP9.85□□□□□ -0.83
NUP98-215ENST00000529063 HNRNPMP52272 730 aaKnown RBP eCLIP9.85□□□□□ -0.83
NUP98-215ENST00000529063 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
NUP98-215ENST00000529063 PLA2R1Q13018 1463 aa9.85□□□□□ -0.83
NUP98-215ENST00000529063 PLEKHH2Q8IVE3 1493 aa9.85□□□□□ -0.83
NUP98-215ENST00000529063 MBD5Q9P267 1494 aa9.84□□□□□ -0.83
NUP98-215ENST00000529063 EHBP1L1Q8N3D4 1523 aa9.83□□□□□ -0.84
NUP98-215ENST00000529063 ESF1Q9H501 851 aaKnown RBP9.83□□□□□ -0.84
NUP98-215ENST00000529063 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
NUP98-215ENST00000529063 DNMT1P26358 1616 aaKnown RBP9.82□□□□□ -0.84
NUP98-215ENST00000529063 POLR1AO95602 1720 aaPredicted RBP9.82□□□□□ -0.84
NUP98-215ENST00000529063 CCNB3Q8WWL7 1395 aa9.82□□□□□ -0.84
NUP98-215ENST00000529063 NEURL4Q96JN8 1562 aa9.82□□□□□ -0.84
NUP98-215ENST00000529063 ZNF335Q9H4Z2 1342 aaPredicted RBP9.82□□□□□ -0.84
NUP98-215ENST00000529063 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
NUP98-215ENST00000529063 ZNF644Q9H582 1327 aaPredicted RBP9.81□□□□□ -0.84
NUP98-215ENST00000529063 MTUS2Q5JR59 1369 aa9.8□□□□□ -0.84
NUP98-215ENST00000529063 CFDP1Q9UEE9 299 aaPredicted RBP9.8□□□□□ -0.84
NUP98-215ENST00000529063 A2ML1A8K2U0 1454 aa9.79□□□□□ -0.84
NUP98-215ENST00000529063 SOCS7O14512 581 aa9.79□□□□□ -0.84
NUP98-215ENST00000529063 CEP162Q5TB80 1403 aa9.79□□□□□ -0.84
NUP98-215ENST00000529063 APLP2Q06481 763 aa9.78□□□□□ -0.84
NUP98-215ENST00000529063 FBXO3Q9UK99 471 aa9.78□□□□□ -0.84
NUP98-215ENST00000529063 RTEL1-TNFRSF6BF6WH68 1400 aa9.78□□□□□ -0.84
NUP98-215ENST00000529063 CAMSAP2Q08AD1 1489 aa9.78□□□□□ -0.84
NUP98-215ENST00000529063 KDM5DQ9BY66 1539 aa9.77□□□□□ -0.84
NUP98-215ENST00000529063 FAM135AQ9P2D6 1515 aa9.77□□□□□ -0.84
NUP98-215ENST00000529063 GGT6Q6P531 493 aa9.77□□□□□ -0.85
NUP98-215ENST00000529063 PZPP20742 1482 aa9.77□□□□□ -0.85
NUP98-215ENST00000529063 ALKQ9UM73 1620 aa9.76□□□□□ -0.85
NUP98-215ENST00000529063 PKD2Q13563 968 aa9.76□□□□□ -0.85
NUP98-215ENST00000529063 NCOA2Q15596 1464 aa9.76□□□□□ -0.85
NUP98-215ENST00000529063 CCDC141Q6ZP82 1450 aa9.76□□□□□ -0.85
NUP98-215ENST00000529063 DHX29Q7Z478 1369 aaKnown RBP9.75□□□□□ -0.85
NUP98-215ENST00000529063 ARHGEF5Q12774 1597 aa9.75□□□□□ -0.85
NUP98-215ENST00000529063 VWDEQ8N2E2 1590 aa9.75□□□□□ -0.85
NUP98-215ENST00000529063 RNF17Q9BXT8 1623 aaKnown RBP9.74□□□□□ -0.85
NUP98-215ENST00000529063 SPDYE4A6NLX3 237 aa9.74□□□□□ -0.85
NUP98-215ENST00000529063 TNRQ92752 1358 aa9.74□□□□□ -0.85
NUP98-215ENST00000529063 STRCP1A6NGW2 1772 aa9.73□□□□□ -0.85
NUP98-215ENST00000529063 UBAP1LF5GYI3 381 aa9.73□□□□□ -0.85
NUP98-215ENST00000529063 FBXO31Q5XUX0 539 aaPredicted RBP9.73□□□□□ -0.85
NUP98-215ENST00000529063 DEPDC5O75140 1603 aa9.73□□□□□ -0.85
NUP98-215ENST00000529063 MROH1Q8NDA8 1641 aa9.73□□□□□ -0.85
NUP98-215ENST00000529063 CPS1P31327 1500 aa9.72□□□□□ -0.85
NUP98-215ENST00000529063 MED1Q15648 1581 aaPredicted RBP9.72□□□□□ -0.85
NUP98-215ENST00000529063 MAST1Q9Y2H9 1570 aa9.72□□□□□ -0.85
NUP98-215ENST00000529063 ZC3H13Q5T200 1668 aaKnown RBP9.72□□□□□ -0.85
NUP98-215ENST00000529063 SHANK2Q9UPX8 1470 aa9.72□□□□□ -0.85
NUP98-215ENST00000529063 IQGAP1P46940 1657 aa9.71□□□□□ -0.85
NUP98-215ENST00000529063 MED14O60244 1454 aa9.71□□□□□ -0.86
NUP98-215ENST00000529063 ABCC3O15438 1527 aa9.71□□□□□ -0.86
NUP98-215ENST00000529063 UGGT1Q9NYU2 1555 aa9.71□□□□□ -0.86
NUP98-215ENST00000529063 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.86
NUP98-215ENST00000529063 CEP152O94986 1710 aa9.7□□□□□ -0.86
NUP98-215ENST00000529063 KIF3BO15066 747 aa9.7□□□□□ -0.86
NUP98-215ENST00000529063 NLRP1Q9C000 1473 aa9.7□□□□□ -0.86
NUP98-215ENST00000529063 MIA2Q96PC5 1412 aa9.69□□□□□ -0.86
NUP98-215ENST00000529063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.69□□□□□ -0.86
NUP98-215ENST00000529063 UBR1Q8IWV7 1749 aa9.68□□□□□ -0.86
NUP98-215ENST00000529063 SYNMO15061 1565 aa9.68□□□□□ -0.86
NUP98-215ENST00000529063 ERVK-7P63135 1459 aa9.67□□□□□ -0.86
NUP98-215ENST00000529063 LRRC9Q6ZRR7 1453 aa9.67□□□□□ -0.86
NUP98-215ENST00000529063 NPHP4O75161 1426 aaPredicted RBP9.67□□□□□ -0.86
NUP98-215ENST00000529063 HSPA1LP34931 641 aa9.67□□□□□ -0.86
NUP98-215ENST00000529063 CROCC2H7BZ55 1655 aa9.67□□□□□ -0.86
NUP98-215ENST00000529063 XIRP1Q702N8 1843 aaKnown RBP9.66□□□□□ -0.86
NUP98-215ENST00000529063 WASHC2CQ9Y4E1 1318 aa9.66□□□□□ -0.86
NUP98-215ENST00000529063 LRRC7Q96NW7 1537 aa9.66□□□□□ -0.86
NUP98-215ENST00000529063 CFAP65Q6ZU64 1925 aaKnown RBP9.65□□□□□ -0.86
NUP98-215ENST00000529063 PRDM15P57071 1507 aaPredicted RBP9.65□□□□□ -0.86
NUP98-215ENST00000529063 VPS8Q8N3P4 1428 aa9.65□□□□□ -0.87
NUP98-215ENST00000529063 PIP4K2BP78356 416 aa9.64□□□□□ -0.87
NUP98-215ENST00000529063 MKRN4PQ13434 485 aaPredicted RBP9.64□□□□□ -0.87
NUP98-215ENST00000529063 RSPH4AQ5TD94 716 aa9.64□□□□□ -0.87
NUP98-215ENST00000529063 VASPP50552 380 aaPredicted RBP9.63□□□□□ -0.87
NUP98-215ENST00000529063 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
NUP98-215ENST00000529063 ANKLE2Q86XL3 938 aa9.63□□□□□ -0.87
NUP98-215ENST00000529063 ARHGAP23Q9P227 1491 aa9.63□□□□□ -0.87
NUP98-215ENST00000529063 SLIT1O75093 1534 aa9.62□□□□□ -0.87
NUP98-215ENST00000529063 MAP3K1Q13233 1512 aa9.62□□□□□ -0.87
NUP98-215ENST00000529063 THEMISQ8N1K5 641 aaPredicted RBP9.62□□□□□ -0.87
NUP98-215ENST00000529063 PROM2Q8N271 834 aa9.62□□□□□ -0.87
NUP98-215ENST00000529063 MYOM3Q5VTT5 1437 aa9.62□□□□□ -0.87
NUP98-215ENST00000529063 DUOX2Q9NRD8 1548 aa9.61□□□□□ -0.87
NUP98-215ENST00000529063 PIK3C2BO00750 1634 aa9.61□□□□□ -0.87
NUP98-215ENST00000529063 TOM1O60784 492 aa9.61□□□□□ -0.87
NUP98-215ENST00000529063 SCAF11Q99590 1463 aaKnown RBP9.6□□□□□ -0.87
NUP98-215ENST00000529063 KANK4Q5T7N3 995 aaPredicted RBP9.6□□□□□ -0.87
NUP98-215ENST00000529063 ARHGAP31Q2M1Z3 1444 aa9.59□□□□□ -0.87
NUP98-215ENST00000529063 TSPY4P0CV99 314 aa9.59□□□□□ -0.87
NUP98-215ENST00000529063 TSPY10P0CW01 314 aa9.59□□□□□ -0.87
NUP98-215ENST00000529063 PTPN23Q9H3S7 1636 aa9.59□□□□□ -0.87
NUP98-215ENST00000529063 KDM5AP29375 1690 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms