RNA–Protein interactions for RNA: ENST00000528962.1

TCP11L1-206, Transcript of t-complex 11 like 1, humanhuman

TSL 3

Gene TCP11L1, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCP11L1-206ENST00000528962 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
TCP11L1-206ENST00000528962 HSPA1LP34931 641 aa17.86■□□□□ 0.45
TCP11L1-206ENST00000528962 PKD2Q13563 968 aa17.86■□□□□ 0.45
TCP11L1-206ENST00000528962 MYO5CQ9NQX4 1742 aa17.86■□□□□ 0.45
TCP11L1-206ENST00000528962 CDK11AQ9UQ88 783 aaPredicted RBP17.84■□□□□ 0.45
TCP11L1-206ENST00000528962 ABCA6Q8N139 1617 aa17.83■□□□□ 0.44
TCP11L1-206ENST00000528962 PLA2R1Q13018 1463 aa17.82■□□□□ 0.44
TCP11L1-206ENST00000528962 RTN4Q9NQC3 1192 aaKnown RBP17.82■□□□□ 0.44
TCP11L1-206ENST00000528962 KIF14Q15058 1648 aa17.82■□□□□ 0.44
TCP11L1-206ENST00000528962 VASPP50552 380 aaPredicted RBP17.81■□□□□ 0.44
TCP11L1-206ENST00000528962 ARHGAP5Q13017 1502 aa17.81■□□□□ 0.44
TCP11L1-206ENST00000528962 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
TCP11L1-206ENST00000528962 TCOF1Q13428 1488 aaKnown RBP17.8■□□□□ 0.44
TCP11L1-206ENST00000528962 TOM1O60784 492 aa17.79■□□□□ 0.44
TCP11L1-206ENST00000528962 VPS8Q8N3P4 1428 aa17.78■□□□□ 0.44
TCP11L1-206ENST00000528962 PIP4K2BP78356 416 aa17.77■□□□□ 0.44
TCP11L1-206ENST00000528962 MROH2AA6NES4 1674 aa17.77■□□□□ 0.43
TCP11L1-206ENST00000528962 TROQ12816 1431 aaPredicted RBP17.75■□□□□ 0.43
TCP11L1-206ENST00000528962 ZNF142P52746 1687 aaPredicted RBP17.73■□□□□ 0.43
TCP11L1-206ENST00000528962 TIAM1Q13009 1591 aa17.7■□□□□ 0.42
TCP11L1-206ENST00000528962 CEP170BQ9Y4F5 1589 aaPredicted RBP17.7■□□□□ 0.42
TCP11L1-206ENST00000528962 MYO3AQ8NEV4 1616 aa17.7■□□□□ 0.42
TCP11L1-206ENST00000528962 RBM42Q9BTD8 480 aaKnown RBP17.7■□□□□ 0.42
TCP11L1-206ENST00000528962 CPS1P31327 1500 aa17.7■□□□□ 0.42
TCP11L1-206ENST00000528962 ABCC1P33527 1531 aa17.7■□□□□ 0.42
TCP11L1-206ENST00000528962 EHBP1L1Q8N3D4 1523 aa17.7■□□□□ 0.42
TCP11L1-206ENST00000528962 KIDINS220Q9ULH0 1771 aa17.7■□□□□ 0.42
TCP11L1-206ENST00000528962 PTPRKQ15262 1439 aa17.7■□□□□ 0.42
TCP11L1-206ENST00000528962 MTUS2Q5JR59 1369 aa17.69■□□□□ 0.42
TCP11L1-206ENST00000528962 AMER1Q5JTC6 1135 aaPredicted RBP17.69■□□□□ 0.42
TCP11L1-206ENST00000528962 CDC42BPAQ5VT25 1732 aa17.68■□□□□ 0.42
TCP11L1-206ENST00000528962 CDC42BPBQ9Y5S2 1711 aa17.68■□□□□ 0.42
TCP11L1-206ENST00000528962 SUPT6HQ7KZ85 1726 aaKnown RBP17.67■□□□□ 0.42
TCP11L1-206ENST00000528962 PREX2Q70Z35 1606 aa17.66■□□□□ 0.42
TCP11L1-206ENST00000528962 SHANK2Q9UPX8 1470 aa17.66■□□□□ 0.42
TCP11L1-206ENST00000528962 ITSN2Q9NZM3 1697 aa17.65■□□□□ 0.42
TCP11L1-206ENST00000528962 IFNLR1Q8IU57 520 aaPredicted RBP17.63■□□□□ 0.41
TCP11L1-206ENST00000528962 A2ML1A8K2U0 1454 aa17.63■□□□□ 0.41
TCP11L1-206ENST00000528962 AKT1S1Q96B36 256 aa17.62■□□□□ 0.41
TCP11L1-206ENST00000528962 SAMD9LQ8IVG5 1584 aa17.62■□□□□ 0.41
TCP11L1-206ENST00000528962 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
TCP11L1-206ENST00000528962 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
TCP11L1-206ENST00000528962 RGS17Q9UGC6 210 aaPredicted RBP17.6■□□□□ 0.41
TCP11L1-206ENST00000528962 SPAG9O60271 1321 aaKnown RBP17.6■□□□□ 0.41
TCP11L1-206ENST00000528962 MAP3K1Q13233 1512 aa17.6■□□□□ 0.41
TCP11L1-206ENST00000528962 DNMT1P26358 1616 aaKnown RBP17.6■□□□□ 0.41
TCP11L1-206ENST00000528962 GGT6Q6P531 493 aa17.58■□□□□ 0.4
TCP11L1-206ENST00000528962 NEURL4Q96JN8 1562 aa17.57■□□□□ 0.4
TCP11L1-206ENST00000528962 LRRC9Q6ZRR7 1453 aa17.57■□□□□ 0.4
TCP11L1-206ENST00000528962 PLXNC1O60486 1568 aa17.57■□□□□ 0.4
TCP11L1-206ENST00000528962 CCNB3Q8WWL7 1395 aa17.56■□□□□ 0.4
TCP11L1-206ENST00000528962 A2MP01023 1474 aa17.56■□□□□ 0.4
TCP11L1-206ENST00000528962 STAG3Q9UJ98 1225 aa17.55■□□□□ 0.4
TCP11L1-206ENST00000528962 VWDEQ8N2E2 1590 aa17.54■□□□□ 0.4
TCP11L1-206ENST00000528962 ANKLE2Q86XL3 938 aa17.54■□□□□ 0.4
TCP11L1-206ENST00000528962 NCOA2Q15596 1464 aa17.54■□□□□ 0.4
TCP11L1-206ENST00000528962 HNRNPMP52272 730 aaKnown RBP eCLIP17.53■□□□□ 0.4
TCP11L1-206ENST00000528962 POLR1AO95602 1720 aaPredicted RBP17.52■□□□□ 0.4
TCP11L1-206ENST00000528962 ATP7AQ04656 1500 aa17.52■□□□□ 0.4
TCP11L1-206ENST00000528962 REM2Q8IYK8 340 aaPredicted RBP17.52■□□□□ 0.4
TCP11L1-206ENST00000528962 ZNF777Q9ULD5 760 aaPredicted RBP17.52■□□□□ 0.4
TCP11L1-206ENST00000528962 GPATCH8Q9UKJ3 1502 aaKnown RBP17.52■□□□□ 0.39
TCP11L1-206ENST00000528962 SYCP2Q9BX26 1530 aa17.51■□□□□ 0.39
TCP11L1-206ENST00000528962 KIAA1107Q9UPP5 1409 aa17.5■□□□□ 0.39
TCP11L1-206ENST00000528962 MED14O60244 1454 aa17.5■□□□□ 0.39
TCP11L1-206ENST00000528962 THEMISQ8N1K5 641 aaPredicted RBP17.49■□□□□ 0.39
TCP11L1-206ENST00000528962 TNRQ92752 1358 aa17.49■□□□□ 0.39
TCP11L1-206ENST00000528962 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
TCP11L1-206ENST00000528962 CFDP1Q9UEE9 299 aaPredicted RBP17.48■□□□□ 0.39
TCP11L1-206ENST00000528962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.48■□□□□ 0.39
TCP11L1-206ENST00000528962 INO80Q9ULG1 1556 aaPredicted RBP17.48■□□□□ 0.39
TCP11L1-206ENST00000528962 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
TCP11L1-206ENST00000528962 FBXO31Q5XUX0 539 aaPredicted RBP17.47■□□□□ 0.39
TCP11L1-206ENST00000528962 LRRC7Q96NW7 1537 aa17.47■□□□□ 0.39
TCP11L1-206ENST00000528962 PLEKHH2Q8IVE3 1493 aa17.45■□□□□ 0.38
TCP11L1-206ENST00000528962 POTEAQ6S8J7 498 aa17.45■□□□□ 0.38
TCP11L1-206ENST00000528962 DEPDC5O75140 1603 aa17.45■□□□□ 0.38
TCP11L1-206ENST00000528962 SPDYE1Q8NFV5 336 aaPredicted RBP17.44■□□□□ 0.38
TCP11L1-206ENST00000528962 RNF17Q9BXT8 1623 aaKnown RBP17.43■□□□□ 0.38
TCP11L1-206ENST00000528962 PZPP20742 1482 aa17.43■□□□□ 0.38
TCP11L1-206ENST00000528962 MIA2Q96PC5 1412 aa17.41■□□□□ 0.38
TCP11L1-206ENST00000528962 CAMSAP2Q08AD1 1489 aa17.41■□□□□ 0.38
TCP11L1-206ENST00000528962 NLRP1Q9C000 1473 aa17.41■□□□□ 0.38
TCP11L1-206ENST00000528962 ADGBQ8N7X0 1667 aa17.41■□□□□ 0.38
TCP11L1-206ENST00000528962 FAM135AQ9P2D6 1515 aa17.4■□□□□ 0.38
TCP11L1-206ENST00000528962 SYNMO15061 1565 aa17.4■□□□□ 0.38
TCP11L1-206ENST00000528962 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
TCP11L1-206ENST00000528962 DHX29Q7Z478 1369 aaKnown RBP17.4■□□□□ 0.38
TCP11L1-206ENST00000528962 MYOM3Q5VTT5 1437 aa17.39■□□□□ 0.38
TCP11L1-206ENST00000528962 PLCD3Q8N3E9 789 aa17.39■□□□□ 0.37
TCP11L1-206ENST00000528962 STRCP1A6NGW2 1772 aa17.38■□□□□ 0.37
TCP11L1-206ENST00000528962 IQGAP1P46940 1657 aa17.38■□□□□ 0.37
TCP11L1-206ENST00000528962 PTPN23Q9H3S7 1636 aa17.37■□□□□ 0.37
TCP11L1-206ENST00000528962 PITPNM1O00562 1244 aa17.37■□□□□ 0.37
TCP11L1-206ENST00000528962 MIER1Q8N108 512 aa17.36■□□□□ 0.37
TCP11L1-206ENST00000528962 CLEC11AQ9Y240 323 aa17.36■□□□□ 0.37
TCP11L1-206ENST00000528962 RTEL1-TNFRSF6BF6WH68 1400 aa17.36■□□□□ 0.37
TCP11L1-206ENST00000528962 KDM5DQ9BY66 1539 aa17.36■□□□□ 0.37
TCP11L1-206ENST00000528962 KIF3BO15066 747 aa17.35■□□□□ 0.37
TCP11L1-206ENST00000528962 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms