RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 TCOF1Q13428 1488 aaKnown RBP22.61■■□□□ 1.21
PACS1-207ENST00000528935 FBXO41Q8TF61 875 aa22.6■■□□□ 1.21
PACS1-207ENST00000528935 SHANK2Q9UPX8 1470 aa22.6■■□□□ 1.21
PACS1-207ENST00000528935 DAPK1P53355 1430 aa22.58■■□□□ 1.21
PACS1-207ENST00000528935 NCOA1Q15788 1441 aa22.57■■□□□ 1.2
PACS1-207ENST00000528935 DUOX2Q9NRD8 1548 aa22.57■■□□□ 1.2
PACS1-207ENST00000528935 MYO3AQ8NEV4 1616 aa22.57■■□□□ 1.2
PACS1-207ENST00000528935 FBXO31Q5XUX0 539 aaPredicted RBP22.57■■□□□ 1.2
PACS1-207ENST00000528935 PZPP20742 1482 aa22.57■■□□□ 1.2
PACS1-207ENST00000528935 RNF17Q9BXT8 1623 aaKnown RBP22.57■■□□□ 1.2
PACS1-207ENST00000528935 EIF2AK4Q9P2K8 1649 aaKnown RBP22.57■■□□□ 1.2
PACS1-207ENST00000528935 PTPRTO14522 1441 aa22.57■■□□□ 1.2
PACS1-207ENST00000528935 KIF15Q9NS87 1388 aa22.56■■□□□ 1.2
PACS1-207ENST00000528935 DNMT1P26358 1616 aaKnown RBP22.56■■□□□ 1.2
PACS1-207ENST00000528935 CROCC2H7BZ55 1655 aa22.55■■□□□ 1.2
PACS1-207ENST00000528935 RRP7BPQ9NSQ0 103 aa22.55■■□□□ 1.2
PACS1-207ENST00000528935 CAMSAP1Q5T5Y3 1602 aa22.55■■□□□ 1.2
PACS1-207ENST00000528935 CEP170BQ9Y4F5 1589 aaPredicted RBP22.55■■□□□ 1.2
PACS1-207ENST00000528935 ZNF142P52746 1687 aaPredicted RBP22.54■■□□□ 1.2
PACS1-207ENST00000528935 TNRQ92752 1358 aa22.53■■□□□ 1.2
PACS1-207ENST00000528935 CERKQ8TCT0 537 aa22.53■■□□□ 1.2
PACS1-207ENST00000528935 A2ML1A8K2U0 1454 aa22.52■■□□□ 1.2
PACS1-207ENST00000528935 ERBINQ96RT1 1412 aa22.51■■□□□ 1.19
PACS1-207ENST00000528935 ABCC3O15438 1527 aa22.51■■□□□ 1.19
PACS1-207ENST00000528935 PLA2R1Q13018 1463 aa22.5■■□□□ 1.19
PACS1-207ENST00000528935 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
PACS1-207ENST00000528935 ANKRD30AQ9BXX3 1397 aa22.5■■□□□ 1.19
PACS1-207ENST00000528935 PKD2Q13563 968 aa22.49■■□□□ 1.19
PACS1-207ENST00000528935 FAM50AQ14320 339 aaKnown RBP22.49■■□□□ 1.19
PACS1-207ENST00000528935 NCKAP5LQ9HCH0 1330 aa22.49■■□□□ 1.19
PACS1-207ENST00000528935 MROH1Q8NDA8 1641 aa22.49■■□□□ 1.19
PACS1-207ENST00000528935 ZC3H13Q5T200 1668 aaKnown RBP22.49■■□□□ 1.19
PACS1-207ENST00000528935 NLRP1Q9C000 1473 aa22.44■■□□□ 1.18
PACS1-207ENST00000528935 PRDM15P57071 1507 aaPredicted RBP22.42■■□□□ 1.18
PACS1-207ENST00000528935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.42■■□□□ 1.18
PACS1-207ENST00000528935 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
PACS1-207ENST00000528935 THEMISQ8N1K5 641 aaPredicted RBP22.41■■□□□ 1.18
PACS1-207ENST00000528935 SPATA31D1Q6ZQQ2 1576 aa22.41■■□□□ 1.18
PACS1-207ENST00000528935 CEP152O94986 1710 aa22.4■■□□□ 1.18
PACS1-207ENST00000528935 ERVK-7P63135 1459 aa22.4■■□□□ 1.18
PACS1-207ENST00000528935 KANK1Q14678 1352 aa22.39■■□□□ 1.18
PACS1-207ENST00000528935 ARHGAP31Q2M1Z3 1444 aa22.39■■□□□ 1.17
PACS1-207ENST00000528935 DEPDC5O75140 1603 aa22.39■■□□□ 1.17
PACS1-207ENST00000528935 LTBP4Q8N2S1 1624 aa22.37■■□□□ 1.17
PACS1-207ENST00000528935 UGGT1Q9NYU2 1555 aa22.37■■□□□ 1.17
PACS1-207ENST00000528935 PPARGC1BQ86YN6 1023 aaKnown RBP22.36■■□□□ 1.17
PACS1-207ENST00000528935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.36■■□□□ 1.17
PACS1-207ENST00000528935 ANKLE2Q86XL3 938 aa22.35■■□□□ 1.17
PACS1-207ENST00000528935 ZNF335Q9H4Z2 1342 aaPredicted RBP22.32■■□□□ 1.16
PACS1-207ENST00000528935 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
PACS1-207ENST00000528935 LMTK2Q8IWU2 1503 aa22.31■■□□□ 1.16
PACS1-207ENST00000528935 VWDEQ8N2E2 1590 aa22.31■■□□□ 1.16
PACS1-207ENST00000528935 CFAP65Q6ZU64 1925 aaKnown RBP22.31■■□□□ 1.16
PACS1-207ENST00000528935 POLR1AO95602 1720 aaPredicted RBP22.29■■□□□ 1.16
PACS1-207ENST00000528935 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
PACS1-207ENST00000528935 ROCK1Q13464 1354 aa22.28■■□□□ 1.16
PACS1-207ENST00000528935 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
PACS1-207ENST00000528935 MED14O60244 1454 aa22.26■■□□□ 1.15
PACS1-207ENST00000528935 NPHP4O75161 1426 aaPredicted RBP22.24■■□□□ 1.15
PACS1-207ENST00000528935 ITGAEP38570 1179 aa22.24■■□□□ 1.15
PACS1-207ENST00000528935 UBR1Q8IWV7 1749 aa22.23■■□□□ 1.15
PACS1-207ENST00000528935 EFCAB6Q5THR3 1501 aa22.22■■□□□ 1.15
PACS1-207ENST00000528935 IDI1Q13907 227 aa22.2■■□□□ 1.14
PACS1-207ENST00000528935 NOS1P29475 1434 aa22.2■■□□□ 1.14
PACS1-207ENST00000528935 STAG3Q9UJ98 1225 aa22.19■■□□□ 1.14
PACS1-207ENST00000528935 ARHGAP23Q9P227 1491 aa22.18■■□□□ 1.14
PACS1-207ENST00000528935 PIK3C2BO00750 1634 aa22.17■■□□□ 1.14
PACS1-207ENST00000528935 SLIT1O75093 1534 aa22.17■■□□□ 1.14
PACS1-207ENST00000528935 RPRD2Q5VT52 1461 aaKnown RBP22.17■■□□□ 1.14
PACS1-207ENST00000528935 TXNDC2Q86VQ3 553 aa22.17■■□□□ 1.14
PACS1-207ENST00000528935 IQGAP1P46940 1657 aa22.17■■□□□ 1.14
PACS1-207ENST00000528935 UNC13BO14795 1591 aa22.16■■□□□ 1.14
PACS1-207ENST00000528935 SCAF11Q99590 1463 aaKnown RBP22.16■■□□□ 1.14
PACS1-207ENST00000528935 RRBP1Q9P2E9 1410 aaKnown RBP22.16■■□□□ 1.14
PACS1-207ENST00000528935 LTKP29376 864 aa22.16■■□□□ 1.14
PACS1-207ENST00000528935 SLC52A1Q9NWF4 448 aa22.16■■□□□ 1.14
PACS1-207ENST00000528935 EID1Q9Y6B2 187 aa22.16■■□□□ 1.14
PACS1-207ENST00000528935 SYNMO15061 1565 aa22.16■■□□□ 1.14
PACS1-207ENST00000528935 CPS1P31327 1500 aa22.16■■□□□ 1.14
PACS1-207ENST00000528935 TMEM2Q9UHN6 1383 aa22.14■■□□□ 1.14
PACS1-207ENST00000528935 TET3O43151 1660 aa22.14■■□□□ 1.14
PACS1-207ENST00000528935 KDM5AP29375 1690 aaKnown RBP22.13■■□□□ 1.13
PACS1-207ENST00000528935 UBAP1LF5GYI3 381 aa22.12■■□□□ 1.13
PACS1-207ENST00000528935 NUP155O75694 1391 aa22.11■■□□□ 1.13
PACS1-207ENST00000528935 GCC2Q8IWJ2 1684 aa22.1■■□□□ 1.13
PACS1-207ENST00000528935 IQGAP3Q86VI3 1631 aa22.08■■□□□ 1.13
PACS1-207ENST00000528935 ADGRB3O60242 1522 aa22.07■■□□□ 1.12
PACS1-207ENST00000528935 E9PCH4 1651 aa22.04■■□□□ 1.12
PACS1-207ENST00000528935 TOM1O60784 492 aa22.02■■□□□ 1.12
PACS1-207ENST00000528935 STRCP1A6NGW2 1772 aa22.01■■□□□ 1.11
PACS1-207ENST00000528935 NAIPQ13075 1403 aa22■■□□□ 1.11
PACS1-207ENST00000528935 HDGFP51858 240 aaKnown RBP22■■□□□ 1.11
PACS1-207ENST00000528935 LRRC7Q96NW7 1537 aa22■■□□□ 1.11
PACS1-207ENST00000528935 TMEM131LA2VDJ0 1609 aa21.98■■□□□ 1.11
PACS1-207ENST00000528935 CHGAP10645 457 aaKnown RBP21.97■■□□□ 1.11
PACS1-207ENST00000528935 SLC26A8Q96RN1 970 aa21.97■■□□□ 1.11
PACS1-207ENST00000528935 ZFYVE9O95405 1425 aa21.97■■□□□ 1.11
PACS1-207ENST00000528935 RIMS2Q9UQ26 1411 aa21.96■■□□□ 1.11
PACS1-207ENST00000528935 PIP4K2BP78356 416 aa21.95■■□□□ 1.1
PACS1-207ENST00000528935 BCANQ96GW7 911 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms