RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 ARHGEF40Q8TER5 1519 aa17.47■□□□□ 0.39
TM9SF1-207ENST00000528895 A2MP01023 1474 aa17.46■□□□□ 0.39
TM9SF1-207ENST00000528895 UNC13BO14795 1591 aa17.45■□□□□ 0.38
TM9SF1-207ENST00000528895 DHX29Q7Z478 1369 aaKnown RBP17.44■□□□□ 0.38
TM9SF1-207ENST00000528895 ADAMTSL3P82987 1691 aa17.44■□□□□ 0.38
TM9SF1-207ENST00000528895 REREQ9P2R6 1566 aa17.42■□□□□ 0.38
TM9SF1-207ENST00000528895 KDM5DQ9BY66 1539 aa17.42■□□□□ 0.38
TM9SF1-207ENST00000528895 YEATS2Q9ULM3 1422 aa17.41■□□□□ 0.38
TM9SF1-207ENST00000528895 CCER1Q8TC90 406 aaPredicted RBP17.41■□□□□ 0.38
TM9SF1-207ENST00000528895 ATP10AO60312 1499 aa17.4■□□□□ 0.38
TM9SF1-207ENST00000528895 TRIM52Q96A61 297 aa17.4■□□□□ 0.38
TM9SF1-207ENST00000528895 BCORL1Q5H9F3 1711 aa17.4■□□□□ 0.38
TM9SF1-207ENST00000528895 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
TM9SF1-207ENST00000528895 DEPDC5O75140 1603 aa17.39■□□□□ 0.38
TM9SF1-207ENST00000528895 PTPRMP28827 1452 aa17.38■□□□□ 0.37
TM9SF1-207ENST00000528895 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
TM9SF1-207ENST00000528895 PRDM15P57071 1507 aaPredicted RBP17.37■□□□□ 0.37
TM9SF1-207ENST00000528895 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
TM9SF1-207ENST00000528895 NUP155O75694 1391 aa17.35■□□□□ 0.37
TM9SF1-207ENST00000528895 KANK1Q14678 1352 aa17.35■□□□□ 0.37
TM9SF1-207ENST00000528895 AGLP35573 1532 aa17.35■□□□□ 0.37
TM9SF1-207ENST00000528895 MADDQ8WXG6 1647 aa17.34■□□□□ 0.37
TM9SF1-207ENST00000528895 CLSPNQ9HAW4 1339 aa17.34■□□□□ 0.37
TM9SF1-207ENST00000528895 FAM135AQ9P2D6 1515 aa17.34■□□□□ 0.37
TM9SF1-207ENST00000528895 PZPP20742 1482 aa17.33■□□□□ 0.37
TM9SF1-207ENST00000528895 KIF3BO15066 747 aa17.33■□□□□ 0.36
TM9SF1-207ENST00000528895 MROH1Q8NDA8 1641 aa17.32■□□□□ 0.36
TM9SF1-207ENST00000528895 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
TM9SF1-207ENST00000528895 ZC3H13Q5T200 1668 aaKnown RBP17.29■□□□□ 0.36
TM9SF1-207ENST00000528895 VWDEQ8N2E2 1590 aa17.29■□□□□ 0.36
TM9SF1-207ENST00000528895 MPHOSPH9Q99550 1183 aa17.29■□□□□ 0.36
TM9SF1-207ENST00000528895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
TM9SF1-207ENST00000528895 TET3O43151 1660 aa17.28■□□□□ 0.36
TM9SF1-207ENST00000528895 FBXO41Q8TF61 875 aa17.27■□□□□ 0.36
TM9SF1-207ENST00000528895 LMTK2Q8IWU2 1503 aa17.26■□□□□ 0.35
TM9SF1-207ENST00000528895 RIMS1Q86UR5 1692 aaKnown RBP17.26■□□□□ 0.35
TM9SF1-207ENST00000528895 LMTK3Q96Q04 1460 aa17.26■□□□□ 0.35
TM9SF1-207ENST00000528895 ARID4BQ4LE39 1312 aaPredicted RBP17.25■□□□□ 0.35
TM9SF1-207ENST00000528895 ZEB1P37275 1124 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-207ENST00000528895 CEP152O94986 1710 aa17.24■□□□□ 0.35
TM9SF1-207ENST00000528895 ABCC3O15438 1527 aa17.23■□□□□ 0.35
TM9SF1-207ENST00000528895 EFCAB6Q5THR3 1501 aa17.23■□□□□ 0.35
TM9SF1-207ENST00000528895 GGT6Q6P531 493 aa17.23■□□□□ 0.35
TM9SF1-207ENST00000528895 SIGLEC1Q9BZZ2 1709 aa17.23■□□□□ 0.35
TM9SF1-207ENST00000528895 PKD2Q13563 968 aa17.21■□□□□ 0.35
TM9SF1-207ENST00000528895 CAMSAP1Q5T5Y3 1602 aa17.21■□□□□ 0.35
TM9SF1-207ENST00000528895 E9PCH4 1651 aa17.19■□□□□ 0.34
TM9SF1-207ENST00000528895 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
TM9SF1-207ENST00000528895 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
TM9SF1-207ENST00000528895 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
TM9SF1-207ENST00000528895 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
TM9SF1-207ENST00000528895 ESF1Q9H501 851 aaKnown RBP17.15■□□□□ 0.34
TM9SF1-207ENST00000528895 SPHKAPQ2M3C7 1700 aa17.15■□□□□ 0.34
TM9SF1-207ENST00000528895 ARHGAP31Q2M1Z3 1444 aa17.14■□□□□ 0.33
TM9SF1-207ENST00000528895 CNTLNQ9NXG0 1405 aa17.14■□□□□ 0.33
TM9SF1-207ENST00000528895 CLTCQ00610 1675 aaKnown RBP17.14■□□□□ 0.33
TM9SF1-207ENST00000528895 TRPM2O94759 1503 aa17.14■□□□□ 0.33
TM9SF1-207ENST00000528895 MLECQ14165 292 aa17.13■□□□□ 0.33
TM9SF1-207ENST00000528895 MROH2AA6NES4 1674 aa17.12■□□□□ 0.33
TM9SF1-207ENST00000528895 CCDC144AA2RUR9 1427 aa17.12■□□□□ 0.33
TM9SF1-207ENST00000528895 NPATQ14207 1427 aa17.12■□□□□ 0.33
TM9SF1-207ENST00000528895 HSPA2P54652 639 aa17.1■□□□□ 0.33
TM9SF1-207ENST00000528895 TONSLQ96HA7 1378 aa17.1■□□□□ 0.33
TM9SF1-207ENST00000528895 PTPRTO14522 1441 aa17.1■□□□□ 0.33
TM9SF1-207ENST00000528895 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
TM9SF1-207ENST00000528895 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
TM9SF1-207ENST00000528895 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
TM9SF1-207ENST00000528895 PREX1Q8TCU6 1659 aa17.07■□□□□ 0.32
TM9SF1-207ENST00000528895 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
TM9SF1-207ENST00000528895 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
TM9SF1-207ENST00000528895 NOS1P29475 1434 aa17.04■□□□□ 0.32
TM9SF1-207ENST00000528895 CLTCL1P53675 1640 aa17.04■□□□□ 0.32
TM9SF1-207ENST00000528895 SPATA31D1Q6ZQQ2 1576 aa17.03■□□□□ 0.32
TM9SF1-207ENST00000528895 SYNMO15061 1565 aa17.02■□□□□ 0.31
TM9SF1-207ENST00000528895 NEURL4Q96JN8 1562 aa17.01■□□□□ 0.31
TM9SF1-207ENST00000528895 ZMYM3Q14202 1370 aa17.01■□□□□ 0.31
TM9SF1-207ENST00000528895 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
TM9SF1-207ENST00000528895 PIK3C2BO00750 1634 aa17■□□□□ 0.31
TM9SF1-207ENST00000528895 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
TM9SF1-207ENST00000528895 KIF1BO60333 1816 aa16.98■□□□□ 0.31
TM9SF1-207ENST00000528895 C3P01024 1663 aa16.98■□□□□ 0.31
TM9SF1-207ENST00000528895 CERKQ8TCT0 537 aa16.98■□□□□ 0.31
TM9SF1-207ENST00000528895 STRCQ7RTU9 1775 aa16.97■□□□□ 0.31
TM9SF1-207ENST00000528895 ADGRB3O60242 1522 aa16.96■□□□□ 0.31
TM9SF1-207ENST00000528895 SLC52A1Q9NWF4 448 aa16.96■□□□□ 0.31
TM9SF1-207ENST00000528895 SPATA31E1Q6ZUB1 1445 aa16.95■□□□□ 0.3
TM9SF1-207ENST00000528895 TNRQ92752 1358 aa16.94■□□□□ 0.3
TM9SF1-207ENST00000528895 CEBPAP49715 358 aaPredicted RBP16.94■□□□□ 0.3
TM9SF1-207ENST00000528895 CFAP65Q6ZU64 1925 aaKnown RBP16.93■□□□□ 0.3
TM9SF1-207ENST00000528895 FBXO31Q5XUX0 539 aaPredicted RBP16.92■□□□□ 0.3
TM9SF1-207ENST00000528895 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
TM9SF1-207ENST00000528895 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
TM9SF1-207ENST00000528895 NLRP1Q9C000 1473 aa16.91■□□□□ 0.3
TM9SF1-207ENST00000528895 KDM5AP29375 1690 aaKnown RBP16.89■□□□□ 0.29
TM9SF1-207ENST00000528895 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.29
TM9SF1-207ENST00000528895 TMEM131LA2VDJ0 1609 aa16.88■□□□□ 0.29
TM9SF1-207ENST00000528895 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
TM9SF1-207ENST00000528895 PPP1R15AO75807 674 aaPredicted RBP16.87■□□□□ 0.29
TM9SF1-207ENST00000528895 IDI1Q13907 227 aa16.87■□□□□ 0.29
TM9SF1-207ENST00000528895 RGL3Q3MIN7 710 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms