RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 ADGBQ8N7X0 1667 aa9.34□□□□□ -0.91
MACF1-228ENST00000528611 DUOX2Q9NRD8 1548 aa9.34□□□□□ -0.91
MACF1-228ENST00000528611 DHX29Q7Z478 1369 aaKnown RBP9.34□□□□□ -0.91
MACF1-228ENST00000528611 ATP10AO60312 1499 aa9.34□□□□□ -0.91
MACF1-228ENST00000528611 ERBINQ96RT1 1412 aa9.33□□□□□ -0.92
MACF1-228ENST00000528611 KIDINS220Q9ULH0 1771 aa9.33□□□□□ -0.92
MACF1-228ENST00000528611 AGLP35573 1532 aa9.33□□□□□ -0.92
MACF1-228ENST00000528611 FAM135AQ9P2D6 1515 aa9.32□□□□□ -0.92
MACF1-228ENST00000528611 BCORL1Q5H9F3 1711 aa9.32□□□□□ -0.92
MACF1-228ENST00000528611 ZNF219Q9P2Y4 722 aaPredicted RBP9.32□□□□□ -0.92
MACF1-228ENST00000528611 PTPRKQ15262 1439 aa9.31□□□□□ -0.92
MACF1-228ENST00000528611 EIF2AK4Q9P2K8 1649 aaKnown RBP9.31□□□□□ -0.92
MACF1-228ENST00000528611 SLC4A2P04920 1241 aa9.31□□□□□ -0.92
MACF1-228ENST00000528611 KIF15Q9NS87 1388 aa9.31□□□□□ -0.92
MACF1-228ENST00000528611 ARHGEF40Q8TER5 1519 aa9.31□□□□□ -0.92
MACF1-228ENST00000528611 ANKRD50Q9ULJ7 1429 aa9.31□□□□□ -0.92
MACF1-228ENST00000528611 A2MP01023 1474 aa9.3□□□□□ -0.92
MACF1-228ENST00000528611 NAIPQ13075 1403 aa9.3□□□□□ -0.92
MACF1-228ENST00000528611 SETD5Q9C0A6 1442 aa9.3□□□□□ -0.92
MACF1-228ENST00000528611 DIP2CQ9Y2E4 1556 aa9.29□□□□□ -0.92
MACF1-228ENST00000528611 GCC2Q8IWJ2 1684 aa9.29□□□□□ -0.92
MACF1-228ENST00000528611 MYT1LQ9UL68 1186 aa9.28□□□□□ -0.92
MACF1-228ENST00000528611 ABCA6Q8N139 1617 aa9.27□□□□□ -0.92
MACF1-228ENST00000528611 ABCB7O75027 752 aa9.27□□□□□ -0.93
MACF1-228ENST00000528611 YEATS2Q9ULM3 1422 aa9.27□□□□□ -0.93
MACF1-228ENST00000528611 RRP7BPQ9NSQ0 103 aa9.26□□□□□ -0.93
MACF1-228ENST00000528611 CHIC2Q9UKJ5 165 aa9.26□□□□□ -0.93
MACF1-228ENST00000528611 ITGAEP38570 1179 aa9.25□□□□□ -0.93
MACF1-228ENST00000528611 KDM5DQ9BY66 1539 aa9.25□□□□□ -0.93
MACF1-228ENST00000528611 KANK1Q14678 1352 aa9.24□□□□□ -0.93
MACF1-228ENST00000528611 DEPDC5O75140 1603 aa9.24□□□□□ -0.93
MACF1-228ENST00000528611 RNF17Q9BXT8 1623 aaKnown RBP9.24□□□□□ -0.93
MACF1-228ENST00000528611 CNTLNQ9NXG0 1405 aa9.23□□□□□ -0.93
MACF1-228ENST00000528611 PRDM15P57071 1507 aaPredicted RBP9.23□□□□□ -0.93
MACF1-228ENST00000528611 LMTK2Q8IWU2 1503 aa9.23□□□□□ -0.93
MACF1-228ENST00000528611 UNC13BO14795 1591 aa9.22□□□□□ -0.93
MACF1-228ENST00000528611 KIF3BO15066 747 aa9.22□□□□□ -0.93
MACF1-228ENST00000528611 ZC3H13Q5T200 1668 aaKnown RBP9.22□□□□□ -0.93
MACF1-228ENST00000528611 RAB3GAP2Q9H2M9 1393 aa9.22□□□□□ -0.93
MACF1-228ENST00000528611 VWDEQ8N2E2 1590 aa9.21□□□□□ -0.93
MACF1-228ENST00000528611 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
MACF1-228ENST00000528611 PCGF6Q9BYE7 350 aa9.21□□□□□ -0.94
MACF1-228ENST00000528611 CLSPNQ9HAW4 1339 aa9.21□□□□□ -0.94
MACF1-228ENST00000528611 ARHGAP31Q2M1Z3 1444 aa9.21□□□□□ -0.94
MACF1-228ENST00000528611 RPRD2Q5VT52 1461 aaKnown RBP9.21□□□□□ -0.94
MACF1-228ENST00000528611 IQGAP3Q86VI3 1631 aa9.19□□□□□ -0.94
MACF1-228ENST00000528611 NUP155O75694 1391 aa9.18□□□□□ -0.94
MACF1-228ENST00000528611 ESF1Q9H501 851 aaKnown RBP9.18□□□□□ -0.94
MACF1-228ENST00000528611 WASHC2CQ9Y4E1 1318 aa9.18□□□□□ -0.94
MACF1-228ENST00000528611 MROH2AA6NES4 1674 aa9.17□□□□□ -0.94
MACF1-228ENST00000528611 MROH1Q8NDA8 1641 aa9.17□□□□□ -0.94
MACF1-228ENST00000528611 ARID4BQ4LE39 1312 aaPredicted RBP9.17□□□□□ -0.94
MACF1-228ENST00000528611 GGT6Q6P531 493 aa9.17□□□□□ -0.94
MACF1-228ENST00000528611 SAMD1Q6SPF0 538 aaPredicted RBP9.16□□□□□ -0.94
MACF1-228ENST00000528611 TET3O43151 1660 aa9.16□□□□□ -0.94
MACF1-228ENST00000528611 TRIM52Q96A61 297 aa9.15□□□□□ -0.94
MACF1-228ENST00000528611 MPHOSPH9Q99550 1183 aa9.15□□□□□ -0.94
MACF1-228ENST00000528611 SLC4A1APQ9BWU0 796 aaKnown RBP9.15□□□□□ -0.94
MACF1-228ENST00000528611 ADAMTSL3P82987 1691 aa9.15□□□□□ -0.94
MACF1-228ENST00000528611 ABCC3O15438 1527 aa9.15□□□□□ -0.95
MACF1-228ENST00000528611 NPATQ14207 1427 aa9.14□□□□□ -0.95
MACF1-228ENST00000528611 ZMYM3Q14202 1370 aa9.13□□□□□ -0.95
MACF1-228ENST00000528611 SLC52A1Q9NWF4 448 aa9.13□□□□□ -0.95
MACF1-228ENST00000528611 EFCAB6Q5THR3 1501 aa9.13□□□□□ -0.95
MACF1-228ENST00000528611 SIGLEC1Q9BZZ2 1709 aa9.13□□□□□ -0.95
MACF1-228ENST00000528611 PZPP20742 1482 aa9.13□□□□□ -0.95
MACF1-228ENST00000528611 PTPRTO14522 1441 aa9.13□□□□□ -0.95
MACF1-228ENST00000528611 CHRDL2Q6WN34 429 aa9.12□□□□□ -0.95
MACF1-228ENST00000528611 STAC3Q96MF2 364 aa9.12□□□□□ -0.95
MACF1-228ENST00000528611 TIMELESSQ9UNS1 1208 aa9.12□□□□□ -0.95
MACF1-228ENST00000528611 CAMSAP1Q5T5Y3 1602 aa9.11□□□□□ -0.95
MACF1-228ENST00000528611 SETD1BQ9UPS6 1966 aaKnown RBP9.11□□□□□ -0.95
MACF1-228ENST00000528611 NOS1P29475 1434 aa9.11□□□□□ -0.95
MACF1-228ENST00000528611 NEURL4Q96JN8 1562 aa9.11□□□□□ -0.95
MACF1-228ENST00000528611 DHX57Q6P158 1386 aaKnown RBP9.11□□□□□ -0.95
MACF1-228ENST00000528611 FER1L4A9Z1Z3 1794 aa9.1□□□□□ -0.95
MACF1-228ENST00000528611 KCNA4P22459 653 aa9.1□□□□□ -0.95
MACF1-228ENST00000528611 PKD2Q13563 968 aa9.1□□□□□ -0.95
MACF1-228ENST00000528611 SPATA31D1Q6ZQQ2 1576 aa9.09□□□□□ -0.95
MACF1-228ENST00000528611 NLRP1Q9C000 1473 aa9.08□□□□□ -0.96
MACF1-228ENST00000528611 E9PCH4 1651 aa9.08□□□□□ -0.96
MACF1-228ENST00000528611 KDM5AP29375 1690 aaKnown RBP9.08□□□□□ -0.96
MACF1-228ENST00000528611 CLTCQ00610 1675 aaKnown RBP9.08□□□□□ -0.96
MACF1-228ENST00000528611 MLECQ14165 292 aa9.08□□□□□ -0.96
MACF1-228ENST00000528611 TRPM2O94759 1503 aa9.08□□□□□ -0.96
MACF1-228ENST00000528611 ANKRD30BQ9BXX2 1392 aa9.08□□□□□ -0.96
MACF1-228ENST00000528611 CEP152O94986 1710 aa9.08□□□□□ -0.96
MACF1-228ENST00000528611 MADDQ8WXG6 1647 aa9.07□□□□□ -0.96
MACF1-228ENST00000528611 PTPRMP28827 1452 aa9.07□□□□□ -0.96
MACF1-228ENST00000528611 ERVK-7P63135 1459 aa9.07□□□□□ -0.96
MACF1-228ENST00000528611 C3P01024 1663 aa9.06□□□□□ -0.96
MACF1-228ENST00000528611 CCDC144AA2RUR9 1427 aa9.05□□□□□ -0.96
MACF1-228ENST00000528611 SPHKAPQ2M3C7 1700 aa9.05□□□□□ -0.96
MACF1-228ENST00000528611 PREX1Q8TCU6 1659 aa9.05□□□□□ -0.96
MACF1-228ENST00000528611 HDGFP51858 240 aaKnown RBP9.05□□□□□ -0.96
MACF1-228ENST00000528611 RPGRIP1LQ68CZ1 1315 aa9.05□□□□□ -0.96
MACF1-228ENST00000528611 TNRQ92752 1358 aa9.04□□□□□ -0.96
MACF1-228ENST00000528611 KDM4FA0A1W2PPD8 638 aa9.04□□□□□ -0.96
MACF1-228ENST00000528611 PIK3C2BO00750 1634 aa9.04□□□□□ -0.96
MACF1-228ENST00000528611 RIMS1Q86UR5 1692 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms