RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 DIP2BQ9P265 1576 aa18.14■□□□□ 0.49
ATG13-211ENST00000528494 INO80Q9ULG1 1556 aaPredicted RBP18.14■□□□□ 0.49
ATG13-211ENST00000528494 KDM5DQ9BY66 1539 aa18.14■□□□□ 0.49
ATG13-211ENST00000528494 RPRD2Q5VT52 1461 aaKnown RBP18.14■□□□□ 0.49
ATG13-211ENST00000528494 HIRIP3Q9BW71 556 aaPredicted RBP18.13■□□□□ 0.49
ATG13-211ENST00000528494 GLI2P10070 1586 aa18.13■□□□□ 0.49
ATG13-211ENST00000528494 DHX29Q7Z478 1369 aaKnown RBP18.12■□□□□ 0.49
ATG13-211ENST00000528494 TSPOAP1O95153 1857 aa18.1■□□□□ 0.49
ATG13-211ENST00000528494 KIDINS220Q9ULH0 1771 aa18.1■□□□□ 0.49
ATG13-211ENST00000528494 UNC13BO14795 1591 aa18.1■□□□□ 0.49
ATG13-211ENST00000528494 KDM5CP41229 1560 aa18.07■□□□□ 0.48
ATG13-211ENST00000528494 ZNF326Q5BKZ1 582 aaKnown RBP18.07■□□□□ 0.48
ATG13-211ENST00000528494 GGT6Q6P531 493 aa18.07■□□□□ 0.48
ATG13-211ENST00000528494 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
ATG13-211ENST00000528494 A2MP01023 1474 aa18.06■□□□□ 0.48
ATG13-211ENST00000528494 NBPF8Q3BBV2 869 aa18.05■□□□□ 0.48
ATG13-211ENST00000528494 MAGI2Q86UL8 1455 aa18.05■□□□□ 0.48
ATG13-211ENST00000528494 IQGAP3Q86VI3 1631 aa18.04■□□□□ 0.48
ATG13-211ENST00000528494 RGL3Q3MIN7 710 aa18.04■□□□□ 0.48
ATG13-211ENST00000528494 TEX14Q8IWB6 1497 aa18.04■□□□□ 0.48
ATG13-211ENST00000528494 HECW2Q9P2P5 1572 aa18.04■□□□□ 0.48
ATG13-211ENST00000528494 KANK1Q14678 1352 aa18.04■□□□□ 0.48
ATG13-211ENST00000528494 KDM2AQ9Y2K7 1162 aa18.03■□□□□ 0.48
ATG13-211ENST00000528494 YEATS2Q9ULM3 1422 aa18.02■□□□□ 0.48
ATG13-211ENST00000528494 PLA2R1Q13018 1463 aa18.02■□□□□ 0.48
ATG13-211ENST00000528494 CCDC144AA2RUR9 1427 aa18.02■□□□□ 0.47
ATG13-211ENST00000528494 DCAF11Q8TEB1 546 aa18■□□□□ 0.47
ATG13-211ENST00000528494 ABCA6Q8N139 1617 aa17.99■□□□□ 0.47
ATG13-211ENST00000528494 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
ATG13-211ENST00000528494 FRMPD1Q5SYB0 1578 aa17.98■□□□□ 0.47
ATG13-211ENST00000528494 RICTORQ6R327 1708 aa17.98■□□□□ 0.47
ATG13-211ENST00000528494 TSHZ2Q9NRE2 1034 aa17.97■□□□□ 0.47
ATG13-211ENST00000528494 KIF13AQ9H1H9 1805 aa17.97■□□□□ 0.47
ATG13-211ENST00000528494 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
ATG13-211ENST00000528494 DEPDC5O75140 1603 aa17.96■□□□□ 0.47
ATG13-211ENST00000528494 WASHC2CQ9Y4E1 1318 aa17.96■□□□□ 0.47
ATG13-211ENST00000528494 EIF2AK4Q9P2K8 1649 aaKnown RBP17.95■□□□□ 0.46
ATG13-211ENST00000528494 MIER1Q8N108 512 aa17.95■□□□□ 0.46
ATG13-211ENST00000528494 COL17A1Q9UMD9 1497 aaPredicted RBP17.94■□□□□ 0.46
ATG13-211ENST00000528494 MROH1Q8NDA8 1641 aa17.94■□□□□ 0.46
ATG13-211ENST00000528494 DIP2CQ9Y2E4 1556 aa17.94■□□□□ 0.46
ATG13-211ENST00000528494 HSPA5P11021 654 aaKnown RBP17.94■□□□□ 0.46
ATG13-211ENST00000528494 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
ATG13-211ENST00000528494 E9PCH4 1651 aa17.93■□□□□ 0.46
ATG13-211ENST00000528494 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.46
ATG13-211ENST00000528494 SUPT16HQ9Y5B9 1047 aaKnown RBP17.91■□□□□ 0.46
ATG13-211ENST00000528494 VWDEQ8N2E2 1590 aa17.91■□□□□ 0.46
ATG13-211ENST00000528494 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
ATG13-211ENST00000528494 ATP10AO60312 1499 aa17.91■□□□□ 0.46
ATG13-211ENST00000528494 DDX10Q13206 875 aaKnown RBP17.9■□□□□ 0.46
ATG13-211ENST00000528494 TET3O43151 1660 aa17.89■□□□□ 0.45
ATG13-211ENST00000528494 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
ATG13-211ENST00000528494 MLECQ14165 292 aa17.87■□□□□ 0.45
ATG13-211ENST00000528494 RNF17Q9BXT8 1623 aaKnown RBP17.86■□□□□ 0.45
ATG13-211ENST00000528494 ZMYM4Q5VZL5 1548 aa17.86■□□□□ 0.45
ATG13-211ENST00000528494 PTPRTO14522 1441 aa17.86■□□□□ 0.45
ATG13-211ENST00000528494 CEP152O94986 1710 aa17.85■□□□□ 0.45
ATG13-211ENST00000528494 EFCAB6Q5THR3 1501 aa17.84■□□□□ 0.45
ATG13-211ENST00000528494 NPATQ14207 1427 aa17.84■□□□□ 0.45
ATG13-211ENST00000528494 CHGAP10645 457 aaKnown RBP17.84■□□□□ 0.45
ATG13-211ENST00000528494 UGGT1Q9NYU2 1555 aa17.84■□□□□ 0.45
ATG13-211ENST00000528494 CARD11Q9BXL7 1154 aa17.83■□□□□ 0.45
ATG13-211ENST00000528494 TRPM2O94759 1503 aa17.83■□□□□ 0.45
ATG13-211ENST00000528494 UHRF1BP1Q6BDS2 1440 aa17.82■□□□□ 0.44
ATG13-211ENST00000528494 ABCC3O15438 1527 aa17.82■□□□□ 0.44
ATG13-211ENST00000528494 LMTK2Q8IWU2 1503 aa17.82■□□□□ 0.44
ATG13-211ENST00000528494 SPHKAPQ2M3C7 1700 aa17.82■□□□□ 0.44
ATG13-211ENST00000528494 CFAP65Q6ZU64 1925 aaKnown RBP17.81■□□□□ 0.44
ATG13-211ENST00000528494 SPATA31E1Q6ZUB1 1445 aa17.81■□□□□ 0.44
ATG13-211ENST00000528494 NBPF1Q3BBV0 1214 aa17.81■□□□□ 0.44
ATG13-211ENST00000528494 CLTCL1P53675 1640 aa17.8■□□□□ 0.44
ATG13-211ENST00000528494 C11orf95C9JLR9 678 aaPredicted RBP17.8■□□□□ 0.44
ATG13-211ENST00000528494 PRAG1Q86YV5 1406 aa17.79■□□□□ 0.44
ATG13-211ENST00000528494 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
ATG13-211ENST00000528494 ARID4BQ4LE39 1312 aaPredicted RBP17.79■□□□□ 0.44
ATG13-211ENST00000528494 BCORL1Q5H9F3 1711 aa17.78■□□□□ 0.44
ATG13-211ENST00000528494 USP47Q96K76 1375 aa17.78■□□□□ 0.44
ATG13-211ENST00000528494 WASHC2AQ641Q2 1341 aa17.78■□□□□ 0.44
ATG13-211ENST00000528494 RALGAPBQ86X10 1494 aa17.76■□□□□ 0.43
ATG13-211ENST00000528494 FBXO31Q5XUX0 539 aaPredicted RBP17.76■□□□□ 0.43
ATG13-211ENST00000528494 POLR3GLQ9BT43 218 aa17.74■□□□□ 0.43
ATG13-211ENST00000528494 CAMSAP1Q5T5Y3 1602 aa17.73■□□□□ 0.43
ATG13-211ENST00000528494 ST20-MTHFSA0A0A6YYL1 179 aa17.73■□□□□ 0.43
ATG13-211ENST00000528494 SIGLEC1Q9BZZ2 1709 aa17.73■□□□□ 0.43
ATG13-211ENST00000528494 CNTLNQ9NXG0 1405 aa17.71■□□□□ 0.43
ATG13-211ENST00000528494 ARHGEF40Q8TER5 1519 aa17.71■□□□□ 0.43
ATG13-211ENST00000528494 IDI1Q13907 227 aa17.71■□□□□ 0.43
ATG13-211ENST00000528494 ESF1Q9H501 851 aaKnown RBP17.71■□□□□ 0.43
ATG13-211ENST00000528494 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.42
ATG13-211ENST00000528494 NOS1P29475 1434 aa17.7■□□□□ 0.42
ATG13-211ENST00000528494 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
ATG13-211ENST00000528494 AGLP35573 1532 aa17.69■□□□□ 0.42
ATG13-211ENST00000528494 ADGRF5Q8IZF2 1346 aa17.69■□□□□ 0.42
ATG13-211ENST00000528494 KIF7Q2M1P5 1343 aa17.69■□□□□ 0.42
ATG13-211ENST00000528494 ARHGAP31Q2M1Z3 1444 aa17.69■□□□□ 0.42
ATG13-211ENST00000528494 REREQ9P2R6 1566 aa17.68■□□□□ 0.42
ATG13-211ENST00000528494 CCDC7Q96M83 1385 aa17.68■□□□□ 0.42
ATG13-211ENST00000528494 PPP6R1Q9UPN7 881 aa17.67■□□□□ 0.42
ATG13-211ENST00000528494 TRPM1Q7Z4N2 1603 aa17.67■□□□□ 0.42
ATG13-211ENST00000528494 CFAP70Q5T0N1 1121 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms