RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 KIF14Q15058 1648 aa13.09□□□□□ -0.31
SF3B2-206ENST00000528302 TSPY4P0CV99 314 aa13.09□□□□□ -0.31
SF3B2-206ENST00000528302 TSPY10P0CW01 314 aa13.09□□□□□ -0.31
SF3B2-206ENST00000528302 CRBNQ96SW2 442 aa13.09□□□□□ -0.31
SF3B2-206ENST00000528302 CEP170Q5SW79 1584 aa13.09□□□□□ -0.31
SF3B2-206ENST00000528302 RAPGEF6Q8TEU7 1601 aa13.08□□□□□ -0.32
SF3B2-206ENST00000528302 C20orf194Q5TEA3 1177 aa13.08□□□□□ -0.32
SF3B2-206ENST00000528302 MIA2Q96PC5 1412 aa13.07□□□□□ -0.32
SF3B2-206ENST00000528302 RGS3P49796 1198 aa13.07□□□□□ -0.32
SF3B2-206ENST00000528302 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
SF3B2-206ENST00000528302 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
SF3B2-206ENST00000528302 ROCK2O75116 1388 aaKnown RBP13.06□□□□□ -0.32
SF3B2-206ENST00000528302 CAMSAP2Q08AD1 1489 aa13.06□□□□□ -0.32
SF3B2-206ENST00000528302 MYBBP1AQ9BQG0 1328 aaKnown RBP13.06□□□□□ -0.32
SF3B2-206ENST00000528302 TROQ12816 1431 aaPredicted RBP13.06□□□□□ -0.32
SF3B2-206ENST00000528302 CARMIL2Q6F5E8 1435 aa13.06□□□□□ -0.32
SF3B2-206ENST00000528302 SYNJ2O15056 1496 aa13.04□□□□□ -0.32
SF3B2-206ENST00000528302 GPATCH8Q9UKJ3 1502 aaKnown RBP13.04□□□□□ -0.32
SF3B2-206ENST00000528302 KIF15Q9NS87 1388 aa13.04□□□□□ -0.32
SF3B2-206ENST00000528302 BCORL1Q5H9F3 1711 aa13.04□□□□□ -0.32
SF3B2-206ENST00000528302 PANK3Q9H999 370 aa13.03□□□□□ -0.32
SF3B2-206ENST00000528302 PZPP20742 1482 aa13.03□□□□□ -0.32
SF3B2-206ENST00000528302 KIAA1107Q9UPP5 1409 aa13.02□□□□□ -0.33
SF3B2-206ENST00000528302 SENP3Q9H4L4 574 aaPredicted RBP13.01□□□□□ -0.33
SF3B2-206ENST00000528302 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
SF3B2-206ENST00000528302 GCC2Q8IWJ2 1684 aa13.01□□□□□ -0.33
SF3B2-206ENST00000528302 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
SF3B2-206ENST00000528302 CCDC146Q8IYE0 955 aa13.01□□□□□ -0.33
SF3B2-206ENST00000528302 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
SF3B2-206ENST00000528302 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
SF3B2-206ENST00000528302 PTPRGP23470 1445 aa13.01□□□□□ -0.33
SF3B2-206ENST00000528302 ANKRD50Q9ULJ7 1429 aa13.01□□□□□ -0.33
SF3B2-206ENST00000528302 BRPF3Q9ULD4 1205 aa13□□□□□ -0.33
SF3B2-206ENST00000528302 ANKRD30AQ9BXX3 1397 aa13□□□□□ -0.33
SF3B2-206ENST00000528302 RALBP1Q15311 655 aa13□□□□□ -0.33
SF3B2-206ENST00000528302 KTN1Q86UP2 1357 aaKnown RBP12.99□□□□□ -0.33
SF3B2-206ENST00000528302 ATP10BO94823 1461 aa12.99□□□□□ -0.33
SF3B2-206ENST00000528302 MAGI1Q96QZ7 1491 aaPredicted RBP12.99□□□□□ -0.33
SF3B2-206ENST00000528302 ROCK1Q13464 1354 aa12.98□□□□□ -0.33
SF3B2-206ENST00000528302 ADAMTS8Q9UP79 889 aa12.98□□□□□ -0.33
SF3B2-206ENST00000528302 DNMT1P26358 1616 aaKnown RBP12.98□□□□□ -0.33
SF3B2-206ENST00000528302 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
SF3B2-206ENST00000528302 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.33
SF3B2-206ENST00000528302 C9orf84Q5VXU9 1444 aa12.95□□□□□ -0.34
SF3B2-206ENST00000528302 NEUROD2Q15784 382 aa12.95□□□□□ -0.34
SF3B2-206ENST00000528302 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-206ENST00000528302 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■□□□□ 9.5
SF3B2-206ENST00000528302 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
SF3B2-206ENST00000528302 NFKBIBQ15653 356 aa12.92□□□□□ -0.34
SF3B2-206ENST00000528302 DISP3Q9P2K9 1392 aa12.92□□□□□ -0.34
SF3B2-206ENST00000528302 NUP160Q12769 1436 aa12.92□□□□□ -0.34
SF3B2-206ENST00000528302 LRPPRCP42704 1394 aaKnown RBP12.91□□□□□ -0.34
SF3B2-206ENST00000528302 PER1O15534 1290 aaPredicted RBP12.9□□□□□ -0.34
SF3B2-206ENST00000528302 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.34
SF3B2-206ENST00000528302 KNSTRNQ9Y448 316 aa12.9□□□□□ -0.34
SF3B2-206ENST00000528302 FRAT1Q92837 279 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-206ENST00000528302 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
SF3B2-206ENST00000528302 PPM1GO15355 546 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-206ENST00000528302 FRAT2O75474 233 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-206ENST00000528302 BCAR3O75815 825 aa12.89□□□□□ -0.35
SF3B2-206ENST00000528302 AFAP1Q8N556 730 aa12.89□□□□□ -0.35
SF3B2-206ENST00000528302 KDM5CP41229 1560 aa12.88□□□□□ -0.35
SF3B2-206ENST00000528302 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
SF3B2-206ENST00000528302 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
SF3B2-206ENST00000528302 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
SF3B2-206ENST00000528302 TMF1P82094 1093 aa12.87□□□□□ -0.35
SF3B2-206ENST00000528302 SLKQ9H2G2 1235 aaPredicted RBP12.87□□□□□ -0.35
SF3B2-206ENST00000528302 ARID4BQ4LE39 1312 aaPredicted RBP12.87□□□□□ -0.35
SF3B2-206ENST00000528302 APAF1O14727 1248 aa12.87□□□□□ -0.35
SF3B2-206ENST00000528302 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
SF3B2-206ENST00000528302 CCDC144AA2RUR9 1427 aa12.86□□□□□ -0.35
SF3B2-206ENST00000528302 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-206ENST00000528302 MBD5Q9P267 1494 aa12.86□□□□□ -0.35
SF3B2-206ENST00000528302 BCL2L13Q9BXK5 485 aa12.86□□□□□ -0.35
SF3B2-206ENST00000528302 RRP7AQ9Y3A4 280 aaKnown RBP12.86□□□□□ -0.35
SF3B2-206ENST00000528302 ARHGAP5Q13017 1502 aa12.86□□□□□ -0.35
SF3B2-206ENST00000528302 GSE1Q14687 1217 aa12.86□□□□□ -0.35
SF3B2-206ENST00000528302 ITSN2Q9NZM3 1697 aa12.85□□□□□ -0.35
SF3B2-206ENST00000528302 MS4A1P11836 297 aa12.85□□□□□ -0.35
SF3B2-206ENST00000528302 DDRGK1Q96HY6 314 aa12.85□□□□□ -0.35
SF3B2-206ENST00000528302 RALGAPBQ86X10 1494 aa12.85□□□□□ -0.35
SF3B2-206ENST00000528302 TESK2Q96S53 571 aa12.84□□□□□ -0.35
SF3B2-206ENST00000528302 ABCC10Q5T3U5 1492 aa12.84□□□□□ -0.35
SF3B2-206ENST00000528302 PARD3Q8TEW0 1356 aa12.83□□□□□ -0.36
SF3B2-206ENST00000528302 PLEKHH1Q9ULM0 1364 aa12.83□□□□□ -0.36
SF3B2-206ENST00000528302 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
SF3B2-206ENST00000528302 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
SF3B2-206ENST00000528302 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.36
SF3B2-206ENST00000528302 ABCA8O94911 1581 aa12.83□□□□□ -0.36
SF3B2-206ENST00000528302 DMRT2Q9Y5R5 561 aa12.82□□□□□ -0.36
SF3B2-206ENST00000528302 CHD1O14646 1710 aa12.82□□□□□ -0.36
SF3B2-206ENST00000528302 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
SF3B2-206ENST00000528302 PANK1Q8TE04 598 aa12.82□□□□□ -0.36
SF3B2-206ENST00000528302 CLUAP1Q96AJ1 413 aa12.82□□□□□ -0.36
SF3B2-206ENST00000528302 COG6Q9Y2V7 657 aa12.82□□□□□ -0.36
SF3B2-206ENST00000528302 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
SF3B2-206ENST00000528302 PLEKHH2Q8IVE3 1493 aa12.81□□□□□ -0.36
SF3B2-206ENST00000528302 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
SF3B2-206ENST00000528302 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
SF3B2-206ENST00000528302 C8orf34Q49A92 452 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms