RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 ZNF142P52746 1687 aaPredicted RBP17.56■□□□□ 0.4
NR1H3-230ENST00000527949 GGT6Q6P531 493 aa17.56■□□□□ 0.4
NR1H3-230ENST00000527949 CEP170BQ9Y4F5 1589 aaPredicted RBP17.56■□□□□ 0.4
NR1H3-230ENST00000527949 MIA2Q96PC5 1412 aa17.55■□□□□ 0.4
NR1H3-230ENST00000527949 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
NR1H3-230ENST00000527949 MYOM3Q5VTT5 1437 aa17.52■□□□□ 0.4
NR1H3-230ENST00000527949 DHX29Q7Z478 1369 aaKnown RBP17.52■□□□□ 0.39
NR1H3-230ENST00000527949 CLTCQ00610 1675 aaKnown RBP17.52■□□□□ 0.39
NR1H3-230ENST00000527949 A2ML1A8K2U0 1454 aa17.51■□□□□ 0.39
NR1H3-230ENST00000527949 TOM1O60784 492 aa17.51■□□□□ 0.39
NR1H3-230ENST00000527949 KANK4Q5T7N3 995 aaPredicted RBP17.51■□□□□ 0.39
NR1H3-230ENST00000527949 FAM135AQ9P2D6 1515 aa17.51■□□□□ 0.39
NR1H3-230ENST00000527949 CPS1P31327 1500 aa17.49■□□□□ 0.39
NR1H3-230ENST00000527949 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
NR1H3-230ENST00000527949 APLP2Q06481 763 aa17.48■□□□□ 0.39
NR1H3-230ENST00000527949 TSPY4P0CV99 314 aa17.46■□□□□ 0.39
NR1H3-230ENST00000527949 TSPY10P0CW01 314 aa17.46■□□□□ 0.39
NR1H3-230ENST00000527949 TNRQ92752 1358 aa17.44■□□□□ 0.38
NR1H3-230ENST00000527949 ANKLE2Q86XL3 938 aa17.44■□□□□ 0.38
NR1H3-230ENST00000527949 THEMISQ8N1K5 641 aaPredicted RBP17.44■□□□□ 0.38
NR1H3-230ENST00000527949 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
NR1H3-230ENST00000527949 DNMT1P26358 1616 aaKnown RBP17.43■□□□□ 0.38
NR1H3-230ENST00000527949 SHANK2Q9UPX8 1470 aa17.43■□□□□ 0.38
NR1H3-230ENST00000527949 PZPP20742 1482 aa17.42■□□□□ 0.38
NR1H3-230ENST00000527949 HSPA1LP34931 641 aa17.41■□□□□ 0.38
NR1H3-230ENST00000527949 WASHC2CQ9Y4E1 1318 aa17.41■□□□□ 0.38
NR1H3-230ENST00000527949 NLRP1Q9C000 1473 aa17.4■□□□□ 0.38
NR1H3-230ENST00000527949 KIF3BO15066 747 aa17.4■□□□□ 0.38
NR1H3-230ENST00000527949 PIP4K2BP78356 416 aa17.4■□□□□ 0.38
NR1H3-230ENST00000527949 KDM5DQ9BY66 1539 aa17.4■□□□□ 0.38
NR1H3-230ENST00000527949 EIF2AK4Q9P2K8 1649 aaKnown RBP17.39■□□□□ 0.37
NR1H3-230ENST00000527949 PTPN23Q9H3S7 1636 aa17.38■□□□□ 0.37
NR1H3-230ENST00000527949 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
NR1H3-230ENST00000527949 RNF17Q9BXT8 1623 aaKnown RBP17.37■□□□□ 0.37
NR1H3-230ENST00000527949 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
NR1H3-230ENST00000527949 FBXO31Q5XUX0 539 aaPredicted RBP17.36■□□□□ 0.37
NR1H3-230ENST00000527949 MED14O60244 1454 aa17.36■□□□□ 0.37
NR1H3-230ENST00000527949 NEURL4Q96JN8 1562 aa17.36■□□□□ 0.37
NR1H3-230ENST00000527949 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-230ENST00000527949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.35■□□□□ 0.37
NR1H3-230ENST00000527949 DUOX2Q9NRD8 1548 aa17.35■□□□□ 0.37
NR1H3-230ENST00000527949 CROCC2H7BZ55 1655 aa17.35■□□□□ 0.37
NR1H3-230ENST00000527949 POLR1AO95602 1720 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-230ENST00000527949 ABCC5O15440 1437 aa17.34■□□□□ 0.37
NR1H3-230ENST00000527949 NPHP4O75161 1426 aaPredicted RBP17.34■□□□□ 0.37
NR1H3-230ENST00000527949 UGGT1Q9NYU2 1555 aa17.33■□□□□ 0.37
NR1H3-230ENST00000527949 ZC3H13Q5T200 1668 aaKnown RBP17.32■□□□□ 0.36
NR1H3-230ENST00000527949 DEPDC5O75140 1603 aa17.32■□□□□ 0.36
NR1H3-230ENST00000527949 DAPK1P53355 1430 aa17.31■□□□□ 0.36
NR1H3-230ENST00000527949 VWDEQ8N2E2 1590 aa17.31■□□□□ 0.36
NR1H3-230ENST00000527949 ERBINQ96RT1 1412 aa17.3■□□□□ 0.36
NR1H3-230ENST00000527949 MROH1Q8NDA8 1641 aa17.29■□□□□ 0.36
NR1H3-230ENST00000527949 KIF15Q9NS87 1388 aa17.28■□□□□ 0.36
NR1H3-230ENST00000527949 ABCC3O15438 1527 aa17.27■□□□□ 0.36
NR1H3-230ENST00000527949 ANKRD30AQ9BXX3 1397 aa17.26■□□□□ 0.35
NR1H3-230ENST00000527949 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-230ENST00000527949 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
NR1H3-230ENST00000527949 SYNMO15061 1565 aa17.23■□□□□ 0.35
NR1H3-230ENST00000527949 IQGAP1P46940 1657 aa17.23■□□□□ 0.35
NR1H3-230ENST00000527949 ARHGAP31Q2M1Z3 1444 aa17.23■□□□□ 0.35
NR1H3-230ENST00000527949 LRRC7Q96NW7 1537 aa17.22■□□□□ 0.35
NR1H3-230ENST00000527949 ERVK-7P63135 1459 aa17.2■□□□□ 0.34
NR1H3-230ENST00000527949 ALKQ9UM73 1620 aa17.2■□□□□ 0.34
NR1H3-230ENST00000527949 RRP7BPQ9NSQ0 103 aa17.19■□□□□ 0.34
NR1H3-230ENST00000527949 SCAF11Q99590 1463 aaKnown RBP17.18■□□□□ 0.34
NR1H3-230ENST00000527949 LMTK2Q8IWU2 1503 aa17.18■□□□□ 0.34
NR1H3-230ENST00000527949 EID1Q9Y6B2 187 aa17.18■□□□□ 0.34
NR1H3-230ENST00000527949 CEP152O94986 1710 aa17.18■□□□□ 0.34
NR1H3-230ENST00000527949 KANK1Q14678 1352 aa17.16■□□□□ 0.34
NR1H3-230ENST00000527949 TXNDC2Q86VQ3 553 aa17.15■□□□□ 0.34
NR1H3-230ENST00000527949 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
NR1H3-230ENST00000527949 ROCK1Q13464 1354 aa17.14■□□□□ 0.33
NR1H3-230ENST00000527949 SLIT1O75093 1534 aa17.13■□□□□ 0.33
NR1H3-230ENST00000527949 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
NR1H3-230ENST00000527949 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
NR1H3-230ENST00000527949 FAM135BQ49AJ0 1406 aa17.12■□□□□ 0.33
NR1H3-230ENST00000527949 ANKRD50Q9ULJ7 1429 aa17.12■□□□□ 0.33
NR1H3-230ENST00000527949 LTKP29376 864 aa17.1■□□□□ 0.33
NR1H3-230ENST00000527949 SENP3Q9H4L4 574 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-230ENST00000527949 KDM5AP29375 1690 aaKnown RBP17.09■□□□□ 0.33
NR1H3-230ENST00000527949 UBR1Q8IWV7 1749 aa17.09■□□□□ 0.33
NR1H3-230ENST00000527949 CFAP65Q6ZU64 1925 aaKnown RBP17.08■□□□□ 0.33
NR1H3-230ENST00000527949 STRCP1A6NGW2 1772 aa17.08■□□□□ 0.33
NR1H3-230ENST00000527949 EFCAB6Q5THR3 1501 aa17.08■□□□□ 0.32
NR1H3-230ENST00000527949 RPRD2Q5VT52 1461 aaKnown RBP17.08■□□□□ 0.32
NR1H3-230ENST00000527949 TMEM2Q9UHN6 1383 aa17.08■□□□□ 0.32
NR1H3-230ENST00000527949 STAG3Q9UJ98 1225 aa17.08■□□□□ 0.32
NR1H3-230ENST00000527949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■□□□□ 10.5
NR1H3-230ENST00000527949 RGS17Q9UGC6 210 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-230ENST00000527949 NOS1P29475 1434 aa17.05■□□□□ 0.32
NR1H3-230ENST00000527949 KCNA6P17658 529 aa17.05■□□□□ 0.32
NR1H3-230ENST00000527949 UNC13BO14795 1591 aa17.05■□□□□ 0.32
NR1H3-230ENST00000527949 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
NR1H3-230ENST00000527949 TET3O43151 1660 aa17.04■□□□□ 0.32
NR1H3-230ENST00000527949 TMEM94Q12767 1356 aa17.02■□□□□ 0.32
NR1H3-230ENST00000527949 GCC2Q8IWJ2 1684 aa17.01■□□□□ 0.31
NR1H3-230ENST00000527949 PROSER2Q86WR7 435 aaPredicted RBP17■□□□□ 0.31
NR1H3-230ENST00000527949 SLC52A1Q9NWF4 448 aa17■□□□□ 0.31
NR1H3-230ENST00000527949 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
NR1H3-230ENST00000527949 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms