RNA–Protein interactions for RNA: ENST00000527363.5

C11orf54-205, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 1,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-205ENST00000527363 SETD1AO15047 1707 aaKnown RBP17.53■□□□□ 0.4
C11orf54-205ENST00000527363 NLRP1Q9C000 1473 aa17.53■□□□□ 0.4
C11orf54-205ENST00000527363 ZNF772Q68DY9 489 aaPredicted RBP17.53■□□□□ 0.4
C11orf54-205ENST00000527363 CDC42BPBQ9Y5S2 1711 aa17.51■□□□□ 0.39
C11orf54-205ENST00000527363 FBXO31Q5XUX0 539 aaPredicted RBP17.5■□□□□ 0.39
C11orf54-205ENST00000527363 PREX2Q70Z35 1606 aa17.5■□□□□ 0.39
C11orf54-205ENST00000527363 MIA2Q96PC5 1412 aa17.49■□□□□ 0.39
C11orf54-205ENST00000527363 UGGT1Q9NYU2 1555 aa17.49■□□□□ 0.39
C11orf54-205ENST00000527363 PZPP20742 1482 aa17.48■□□□□ 0.39
C11orf54-205ENST00000527363 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
C11orf54-205ENST00000527363 ATP7AQ04656 1500 aa17.47■□□□□ 0.39
C11orf54-205ENST00000527363 KDM5DQ9BY66 1539 aa17.47■□□□□ 0.39
C11orf54-205ENST00000527363 MSH5O43196 834 aa17.47■□□□□ 0.39
C11orf54-205ENST00000527363 JCADQ9P266 1359 aa17.47■□□□□ 0.39
C11orf54-205ENST00000527363 KIAA1107Q9UPP5 1409 aa17.47■□□□□ 0.39
C11orf54-205ENST00000527363 TRIM52Q96A61 297 aa17.45■□□□□ 0.38
C11orf54-205ENST00000527363 HNRNPMP52272 730 aaKnown RBP eCLIP17.44■□□□□ 0.38
C11orf54-205ENST00000527363 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
C11orf54-205ENST00000527363 STRCP1A6NGW2 1772 aa17.43■□□□□ 0.38
C11orf54-205ENST00000527363 RXRBP28702 533 aa17.43■□□□□ 0.38
C11orf54-205ENST00000527363 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
C11orf54-205ENST00000527363 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
C11orf54-205ENST00000527363 SPATA31A6Q5VVP1 1343 aa17.41■□□□□ 0.38
C11orf54-205ENST00000527363 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
C11orf54-205ENST00000527363 SYCP2Q9BX26 1530 aa17.4■□□□□ 0.38
C11orf54-205ENST00000527363 INO80Q9ULG1 1556 aaPredicted RBP17.4■□□□□ 0.38
C11orf54-205ENST00000527363 WASHC2CQ9Y4E1 1318 aa17.39■□□□□ 0.37
C11orf54-205ENST00000527363 EEA1Q15075 1411 aa17.38■□□□□ 0.37
C11orf54-205ENST00000527363 DHX29Q7Z478 1369 aaKnown RBP17.38■□□□□ 0.37
C11orf54-205ENST00000527363 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
C11orf54-205ENST00000527363 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
C11orf54-205ENST00000527363 TMEM94Q12767 1356 aa17.35■□□□□ 0.37
C11orf54-205ENST00000527363 FGD6Q6ZV73 1430 aa17.34■□□□□ 0.37
C11orf54-205ENST00000527363 ROBO1Q9Y6N7 1651 aa17.33■□□□□ 0.37
C11orf54-205ENST00000527363 SCAF11Q99590 1463 aaKnown RBP17.33■□□□□ 0.37
C11orf54-205ENST00000527363 RTEL1-TNFRSF6BF6WH68 1400 aa17.33■□□□□ 0.36
C11orf54-205ENST00000527363 KIF3BO15066 747 aa17.33■□□□□ 0.36
C11orf54-205ENST00000527363 ADGBQ8N7X0 1667 aa17.32■□□□□ 0.36
C11orf54-205ENST00000527363 CFDP1Q9UEE9 299 aaPredicted RBP17.32■□□□□ 0.36
C11orf54-205ENST00000527363 ZC3H13Q5T200 1668 aaKnown RBP17.32■□□□□ 0.36
C11orf54-205ENST00000527363 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
C11orf54-205ENST00000527363 CCDC18Q5T9S5 1454 aa17.31■□□□□ 0.36
C11orf54-205ENST00000527363 TXNDC2Q86VQ3 553 aa17.3■□□□□ 0.36
C11orf54-205ENST00000527363 SLAIN2Q9P270 581 aa17.3■□□□□ 0.36
C11orf54-205ENST00000527363 KCNA6P17658 529 aa17.29■□□□□ 0.36
C11orf54-205ENST00000527363 CDC42BPAQ5VT25 1732 aa17.29■□□□□ 0.36
C11orf54-205ENST00000527363 EID1Q9Y6B2 187 aa17.28■□□□□ 0.36
C11orf54-205ENST00000527363 ARHGAP35Q9NRY4 1499 aa17.28■□□□□ 0.36
C11orf54-205ENST00000527363 LRP6O75581 1613 aa17.28■□□□□ 0.36
C11orf54-205ENST00000527363 LTKP29376 864 aa17.27■□□□□ 0.36
C11orf54-205ENST00000527363 XIRP1Q702N8 1843 aaKnown RBP17.26■□□□□ 0.35
C11orf54-205ENST00000527363 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
C11orf54-205ENST00000527363 ARHGAP23Q9P227 1491 aa17.25■□□□□ 0.35
C11orf54-205ENST00000527363 MSH6P52701 1360 aa17.25■□□□□ 0.35
C11orf54-205ENST00000527363 SLIT1O75093 1534 aa17.24■□□□□ 0.35
C11orf54-205ENST00000527363 MAP3K1Q13233 1512 aa17.23■□□□□ 0.35
C11orf54-205ENST00000527363 RBM6P78332 1123 aaKnown RBP17.23■□□□□ 0.35
C11orf54-205ENST00000527363 PHLPP1O60346 1717 aa17.22■□□□□ 0.35
C11orf54-205ENST00000527363 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.35
C11orf54-205ENST00000527363 ABCC3O15438 1527 aa17.21■□□□□ 0.34
C11orf54-205ENST00000527363 PRDM15P57071 1507 aaPredicted RBP17.21■□□□□ 0.34
C11orf54-205ENST00000527363 ATAD2Q6PL18 1390 aa17.2■□□□□ 0.34
C11orf54-205ENST00000527363 CCNB3Q8WWL7 1395 aa17.2■□□□□ 0.34
C11orf54-205ENST00000527363 NUTM2BA6NNL0 878 aaPredicted RBP17.2■□□□□ 0.34
C11orf54-205ENST00000527363 NUTM2EB1AL46 878 aaPredicted RBP17.2■□□□□ 0.34
C11orf54-205ENST00000527363 NUTM2DQ5VT03 806 aaPredicted RBP17.2■□□□□ 0.34
C11orf54-205ENST00000527363 NUTM2AQ8IVF1 878 aaPredicted RBP17.2■□□□□ 0.34
C11orf54-205ENST00000527363 COL16A1Q07092 1604 aaPredicted RBP17.19■□□□□ 0.34
C11orf54-205ENST00000527363 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
C11orf54-205ENST00000527363 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
C11orf54-205ENST00000527363 CCDC125Q86Z20 511 aa17.18■□□□□ 0.34
C11orf54-205ENST00000527363 RGS12O14924 1447 aa17.18■□□□□ 0.34
C11orf54-205ENST00000527363 AFF2P51816 1311 aa17.18■□□□□ 0.34
C11orf54-205ENST00000527363 NKTRP30414 1462 aaKnown RBP17.18■□□□□ 0.34
C11orf54-205ENST00000527363 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
C11orf54-205ENST00000527363 UBTFP17480 764 aaKnown RBP17.17■□□□□ 0.34
C11orf54-205ENST00000527363 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
C11orf54-205ENST00000527363 RBM33Q96EV2 1170 aaKnown RBP17.17■□□□□ 0.34
C11orf54-205ENST00000527363 LRRIQ1Q96JM4 1722 aa17.16■□□□□ 0.34
C11orf54-205ENST00000527363 NGLY1Q96IV0 654 aa17.16■□□□□ 0.34
C11orf54-205ENST00000527363 SETBP1Q9Y6X0 1596 aa17.15■□□□□ 0.34
C11orf54-205ENST00000527363 QTRT2Q9H974 415 aaKnown RBP17.15■□□□□ 0.34
C11orf54-205ENST00000527363 TMEM2Q9UHN6 1383 aa17.14■□□□□ 0.33
C11orf54-205ENST00000527363 TIAM1Q13009 1591 aa17.13■□□□□ 0.33
C11orf54-205ENST00000527363 UBR1Q8IWV7 1749 aa17.13■□□□□ 0.33
C11orf54-205ENST00000527363 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
C11orf54-205ENST00000527363 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
C11orf54-205ENST00000527363 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
C11orf54-205ENST00000527363 CAMSAP2Q08AD1 1489 aa17.09■□□□□ 0.33
C11orf54-205ENST00000527363 AHDC1Q5TGY3 1603 aaPredicted RBP17.09■□□□□ 0.33
C11orf54-205ENST00000527363 CADPS2Q86UW7 1296 aa17.08■□□□□ 0.32
C11orf54-205ENST00000527363 SLC26A8Q96RN1 970 aa17.08■□□□□ 0.32
C11orf54-205ENST00000527363 NWD1Q149M9 1564 aa17.06■□□□□ 0.32
C11orf54-205ENST00000527363 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
C11orf54-205ENST00000527363 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
C11orf54-205ENST00000527363 TET3O43151 1660 aa17.05■□□□□ 0.32
C11orf54-205ENST00000527363 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
C11orf54-205ENST00000527363 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
C11orf54-205ENST00000527363 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
C11orf54-205ENST00000527363 TSPY4P0CV99 314 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms