RNA–Protein interactions for RNA: ENST00000526960.1

PTP4A2-209, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-209ENST00000526960 FBXO31Q5XUX0 539 aaPredicted RBP23.1■■□□□ 1.29
PTP4A2-209ENST00000526960 WASHC2CQ9Y4E1 1318 aa23.08■■□□□ 1.29
PTP4A2-209ENST00000526960 DNMT1P26358 1616 aaKnown RBP23.08■■□□□ 1.29
PTP4A2-209ENST00000526960 TNRQ92752 1358 aa23.08■■□□□ 1.29
PTP4A2-209ENST00000526960 SPATA31D1Q6ZQQ2 1576 aa23.07■■□□□ 1.28
PTP4A2-209ENST00000526960 CCDC141Q6ZP82 1450 aa23.07■■□□□ 1.28
PTP4A2-209ENST00000526960 THEMISQ8N1K5 641 aaPredicted RBP23.07■■□□□ 1.28
PTP4A2-209ENST00000526960 PZPP20742 1482 aa23.06■■□□□ 1.28
PTP4A2-209ENST00000526960 TSPY4P0CV99 314 aa23.06■■□□□ 1.28
PTP4A2-209ENST00000526960 TSPY10P0CW01 314 aa23.06■■□□□ 1.28
PTP4A2-209ENST00000526960 ANKLE2Q86XL3 938 aa23.06■■□□□ 1.28
PTP4A2-209ENST00000526960 MIA2Q96PC5 1412 aa23.04■■□□□ 1.28
PTP4A2-209ENST00000526960 NCOA2Q15596 1464 aa23.04■■□□□ 1.28
PTP4A2-209ENST00000526960 TOM1O60784 492 aa23.02■■□□□ 1.28
PTP4A2-209ENST00000526960 KDM5DQ9BY66 1539 aa23.01■■□□□ 1.27
PTP4A2-209ENST00000526960 CAMSAP2Q08AD1 1489 aa23■■□□□ 1.27
PTP4A2-209ENST00000526960 NLRP1Q9C000 1473 aa22.99■■□□□ 1.27
PTP4A2-209ENST00000526960 SHANK2Q9UPX8 1470 aa22.99■■□□□ 1.27
PTP4A2-209ENST00000526960 CPS1P31327 1500 aa22.99■■□□□ 1.27
PTP4A2-209ENST00000526960 ARHGEF5Q12774 1597 aa22.97■■□□□ 1.27
PTP4A2-209ENST00000526960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.97■■□□□ 1.278e-10■■□□□ 14.3
PTP4A2-209ENST00000526960 MED14O60244 1454 aa22.97■■□□□ 1.27
PTP4A2-209ENST00000526960 NEURL4Q96JN8 1562 aa22.95■■□□□ 1.26
PTP4A2-209ENST00000526960 HSPA1LP34931 641 aa22.93■■□□□ 1.26
PTP4A2-209ENST00000526960 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
PTP4A2-209ENST00000526960 POLR1AO95602 1720 aaPredicted RBP22.91■■□□□ 1.26
PTP4A2-209ENST00000526960 NPHP4O75161 1426 aaPredicted RBP22.91■■□□□ 1.26
PTP4A2-209ENST00000526960 DEPDC5O75140 1603 aa22.9■■□□□ 1.26
PTP4A2-209ENST00000526960 PIP4K2BP78356 416 aa22.89■■□□□ 1.25
PTP4A2-209ENST00000526960 LRRC9Q6ZRR7 1453 aa22.89■■□□□ 1.25
PTP4A2-209ENST00000526960 VWDEQ8N2E2 1590 aa22.88■■□□□ 1.25
PTP4A2-209ENST00000526960 MAST1Q9Y2H9 1570 aa22.86■■□□□ 1.25
PTP4A2-209ENST00000526960 RNF17Q9BXT8 1623 aaKnown RBP22.85■■□□□ 1.25
PTP4A2-209ENST00000526960 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
PTP4A2-209ENST00000526960 VPS8Q8N3P4 1428 aa22.84■■□□□ 1.25
PTP4A2-209ENST00000526960 MAP3K1Q13233 1512 aa22.84■■□□□ 1.25
PTP4A2-209ENST00000526960 ABCC3O15438 1527 aa22.83■■□□□ 1.25
PTP4A2-209ENST00000526960 KANK4Q5T7N3 995 aaPredicted RBP22.82■■□□□ 1.24
PTP4A2-209ENST00000526960 MYOM3Q5VTT5 1437 aa22.81■■□□□ 1.24
PTP4A2-209ENST00000526960 ZC3H13Q5T200 1668 aaKnown RBP22.8■■□□□ 1.24
PTP4A2-209ENST00000526960 ERVK-7P63135 1459 aa22.79■■□□□ 1.24
PTP4A2-209ENST00000526960 EIF2AK4Q9P2K8 1649 aaKnown RBP22.79■■□□□ 1.24
PTP4A2-209ENST00000526960 ARHGAP31Q2M1Z3 1444 aa22.78■■□□□ 1.24
PTP4A2-209ENST00000526960 ALKQ9UM73 1620 aa22.76■■□□□ 1.23
PTP4A2-209ENST00000526960 IQGAP1P46940 1657 aa22.76■■□□□ 1.23
PTP4A2-209ENST00000526960 LRRC7Q96NW7 1537 aa22.76■■□□□ 1.23
PTP4A2-209ENST00000526960 DUOX2Q9NRD8 1548 aa22.76■■□□□ 1.23
PTP4A2-209ENST00000526960 LOC105371045A0A1W2PR82 267 aa22.75■■□□□ 1.23
PTP4A2-209ENST00000526960 LTKP29376 864 aa22.74■■□□□ 1.23
PTP4A2-209ENST00000526960 MED1Q15648 1581 aaPredicted RBP22.74■■□□□ 1.23
PTP4A2-209ENST00000526960 MROH1Q8NDA8 1641 aa22.74■■□□□ 1.23
PTP4A2-209ENST00000526960 TXNDC2Q86VQ3 553 aa22.73■■□□□ 1.23
PTP4A2-209ENST00000526960 ARHGAP23Q9P227 1491 aa22.73■■□□□ 1.23
PTP4A2-209ENST00000526960 EID1Q9Y6B2 187 aa22.7■■□□□ 1.22
PTP4A2-209ENST00000526960 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
PTP4A2-209ENST00000526960 SLIT1O75093 1534 aa22.7■■□□□ 1.22
PTP4A2-209ENST00000526960 ERBINQ96RT1 1412 aa22.69■■□□□ 1.22
PTP4A2-209ENST00000526960 STRCP1A6NGW2 1772 aa22.68■■□□□ 1.22
PTP4A2-209ENST00000526960 ABCC5O15440 1437 aa22.68■■□□□ 1.22
PTP4A2-209ENST00000526960 KIF15Q9NS87 1388 aa22.68■■□□□ 1.22
PTP4A2-209ENST00000526960 RRP7BPQ9NSQ0 103 aa22.68■■□□□ 1.22
PTP4A2-209ENST00000526960 UBR1Q8IWV7 1749 aa22.68■■□□□ 1.22
PTP4A2-209ENST00000526960 SYNMO15061 1565 aa22.66■■□□□ 1.22
PTP4A2-209ENST00000526960 CFAP65Q6ZU64 1925 aaKnown RBP22.65■■□□□ 1.22
PTP4A2-209ENST00000526960 PHF23Q9BUL5 403 aaPredicted RBP22.65■■□□□ 1.22
PTP4A2-209ENST00000526960 PRDM15P57071 1507 aaPredicted RBP22.64■■□□□ 1.21
PTP4A2-209ENST00000526960 TMEM2Q9UHN6 1383 aa22.63■■□□□ 1.21
PTP4A2-209ENST00000526960 CEP152O94986 1710 aa22.62■■□□□ 1.21
PTP4A2-209ENST00000526960 IDI1Q13907 227 aa22.62■■□□□ 1.21
PTP4A2-209ENST00000526960 KANK1Q14678 1352 aa22.62■■□□□ 1.21
PTP4A2-209ENST00000526960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.61■■□□□ 1.21
PTP4A2-209ENST00000526960 APLP2Q06481 763 aa22.6■■□□□ 1.21
PTP4A2-209ENST00000526960 FAM135BQ49AJ0 1406 aa22.59■■□□□ 1.21
PTP4A2-209ENST00000526960 KCNA6P17658 529 aa22.59■■□□□ 1.21
PTP4A2-209ENST00000526960 STAG3Q9UJ98 1225 aa22.59■■□□□ 1.21
PTP4A2-209ENST00000526960 DAPK1P53355 1430 aa22.58■■□□□ 1.21
PTP4A2-209ENST00000526960 LMTK2Q8IWU2 1503 aa22.57■■□□□ 1.2
PTP4A2-209ENST00000526960 SLC52A1Q9NWF4 448 aa22.57■■□□□ 1.2
PTP4A2-209ENST00000526960 ANKRD30AQ9BXX3 1397 aa22.57■■□□□ 1.2
PTP4A2-209ENST00000526960 PTPN23Q9H3S7 1636 aa22.55■■□□□ 1.2
PTP4A2-209ENST00000526960 KDM5AP29375 1690 aaKnown RBP22.55■■□□□ 1.2
PTP4A2-209ENST00000526960 RGS17Q9UGC6 210 aaPredicted RBP22.54■■□□□ 1.2
PTP4A2-209ENST00000526960 FGD6Q6ZV73 1430 aa22.53■■□□□ 1.2
PTP4A2-209ENST00000526960 NOS1P29475 1434 aa22.52■■□□□ 1.2
PTP4A2-209ENST00000526960 PIK3C2BO00750 1634 aa22.52■■□□□ 1.2
PTP4A2-209ENST00000526960 CROCC2H7BZ55 1655 aa22.52■■□□□ 1.2
PTP4A2-209ENST00000526960 CHIC2Q9UKJ5 165 aa22.51■■□□□ 1.19
PTP4A2-209ENST00000526960 TET3O43151 1660 aa22.51■■□□□ 1.19
PTP4A2-209ENST00000526960 EFCAB6Q5THR3 1501 aa22.51■■□□□ 1.19
PTP4A2-209ENST00000526960 TMEM94Q12767 1356 aa22.5■■□□□ 1.19
PTP4A2-209ENST00000526960 PROSER2Q86WR7 435 aaPredicted RBP22.5■■□□□ 1.19
PTP4A2-209ENST00000526960 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
PTP4A2-209ENST00000526960 XIRP1Q702N8 1843 aaKnown RBP22.49■■□□□ 1.19
PTP4A2-209ENST00000526960 SLC26A8Q96RN1 970 aa22.48■■□□□ 1.19
PTP4A2-209ENST00000526960 HDGFP51858 240 aaKnown RBP22.46■■□□□ 1.19
PTP4A2-209ENST00000526960 ADGRL2O95490 1459 aa22.44■■□□□ 1.18
PTP4A2-209ENST00000526960 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
PTP4A2-209ENST00000526960 SLAIN2Q9P270 581 aa22.41■■□□□ 1.18
PTP4A2-209ENST00000526960 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
PTP4A2-209ENST00000526960 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms