RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 LRRC9Q6ZRR7 1453 aa23.87■■□□□ 1.41
LTBP3-206ENST00000526825 ZNF142P52746 1687 aaPredicted RBP23.86■■□□□ 1.41
LTBP3-206ENST00000526825 ZNF335Q9H4Z2 1342 aaPredicted RBP23.85■■□□□ 1.41
LTBP3-206ENST00000526825 IQSEC2Q5JU85 1478 aa23.85■■□□□ 1.41
LTBP3-206ENST00000526825 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
LTBP3-206ENST00000526825 ARHGEF5Q12774 1597 aa23.83■■□□□ 1.41
LTBP3-206ENST00000526825 A2ML1A8K2U0 1454 aa23.83■■□□□ 1.41
LTBP3-206ENST00000526825 TNRQ92752 1358 aa23.8■■□□□ 1.4
LTBP3-206ENST00000526825 DNMT1P26358 1616 aaKnown RBP23.79■■□□□ 1.4
LTBP3-206ENST00000526825 PZPP20742 1482 aa23.79■■□□□ 1.4
LTBP3-206ENST00000526825 MAP3K1Q13233 1512 aa23.79■■□□□ 1.4
LTBP3-206ENST00000526825 FAM135AQ9P2D6 1515 aa23.79■■□□□ 1.4
LTBP3-206ENST00000526825 KDM5DQ9BY66 1539 aa23.78■■□□□ 1.4
LTBP3-206ENST00000526825 MIA2Q96PC5 1412 aa23.76■■□□□ 1.39
LTBP3-206ENST00000526825 THEMISQ8N1K5 641 aaPredicted RBP23.73■■□□□ 1.39
LTBP3-206ENST00000526825 MYOM3Q5VTT5 1437 aa23.72■■□□□ 1.39
LTBP3-206ENST00000526825 MAST1Q9Y2H9 1570 aa23.72■■□□□ 1.39
LTBP3-206ENST00000526825 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
LTBP3-206ENST00000526825 UBAP1LF5GYI3 381 aa23.71■■□□□ 1.39
LTBP3-206ENST00000526825 ANKLE2Q86XL3 938 aa23.71■■□□□ 1.39
LTBP3-206ENST00000526825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.7■■□□□ 1.38
LTBP3-206ENST00000526825 ILDR2Q71H61 639 aa23.68■■□□□ 1.38
LTBP3-206ENST00000526825 NLRP1Q9C000 1473 aa23.68■■□□□ 1.38
LTBP3-206ENST00000526825 NEURL4Q96JN8 1562 aa23.65■■□□□ 1.38
LTBP3-206ENST00000526825 RNF17Q9BXT8 1623 aaKnown RBP23.65■■□□□ 1.38
LTBP3-206ENST00000526825 ABCC3O15438 1527 aa23.64■■□□□ 1.38
LTBP3-206ENST00000526825 UGGT1Q9NYU2 1555 aa23.63■■□□□ 1.37
LTBP3-206ENST00000526825 MED14O60244 1454 aa23.61■■□□□ 1.37
LTBP3-206ENST00000526825 SHANK2Q9UPX8 1470 aa23.61■■□□□ 1.37
LTBP3-206ENST00000526825 ABCC5O15440 1437 aa23.6■■□□□ 1.37
LTBP3-206ENST00000526825 EIF2AK4Q9P2K8 1649 aaKnown RBP23.6■■□□□ 1.37
LTBP3-206ENST00000526825 POLR1AO95602 1720 aaPredicted RBP23.6■■□□□ 1.37
LTBP3-206ENST00000526825 APLP2Q06481 763 aa23.6■■□□□ 1.37
LTBP3-206ENST00000526825 SPATA31D1Q6ZQQ2 1576 aa23.6■■□□□ 1.37
LTBP3-206ENST00000526825 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
LTBP3-206ENST00000526825 MROH1Q8NDA8 1641 aa23.59■■□□□ 1.37
LTBP3-206ENST00000526825 RRP7BPQ9NSQ0 103 aa23.58■■□□□ 1.37
LTBP3-206ENST00000526825 NPHP4O75161 1426 aaPredicted RBP23.58■■□□□ 1.36
LTBP3-206ENST00000526825 ERVK-7P63135 1459 aa23.57■■□□□ 1.36
LTBP3-206ENST00000526825 CPS1P31327 1500 aa23.57■■□□□ 1.36
LTBP3-206ENST00000526825 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
LTBP3-206ENST00000526825 KIF15Q9NS87 1388 aa23.56■■□□□ 1.36
LTBP3-206ENST00000526825 DEPDC5O75140 1603 aa23.55■■□□□ 1.36
LTBP3-206ENST00000526825 VWDEQ8N2E2 1590 aa23.54■■□□□ 1.36
LTBP3-206ENST00000526825 TOM1O60784 492 aa23.54■■□□□ 1.36
LTBP3-206ENST00000526825 CFAP65Q6ZU64 1925 aaKnown RBP23.54■■□□□ 1.36
LTBP3-206ENST00000526825 ARHGAP31Q2M1Z3 1444 aa23.52■■□□□ 1.36
LTBP3-206ENST00000526825 SOCS7O14512 581 aa23.52■■□□□ 1.36
LTBP3-206ENST00000526825 PTPN23Q9H3S7 1636 aa23.51■■□□□ 1.35
LTBP3-206ENST00000526825 ERBINQ96RT1 1412 aa23.51■■□□□ 1.35
LTBP3-206ENST00000526825 DAPK1P53355 1430 aa23.5■■□□□ 1.35
LTBP3-206ENST00000526825 PIP4K2BP78356 416 aa23.5■■□□□ 1.35
LTBP3-206ENST00000526825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.352e-6■□□□□ 9.6
LTBP3-206ENST00000526825 CEP152O94986 1710 aa23.5■■□□□ 1.35
LTBP3-206ENST00000526825 FGD6Q6ZV73 1430 aa23.5■■□□□ 1.35
LTBP3-206ENST00000526825 LTKP29376 864 aa23.48■■□□□ 1.35
LTBP3-206ENST00000526825 HSPA1LP34931 641 aa23.48■■□□□ 1.35
LTBP3-206ENST00000526825 CHIC2Q9UKJ5 165 aa23.48■■□□□ 1.35
LTBP3-206ENST00000526825 PRDM15P57071 1507 aaPredicted RBP23.46■■□□□ 1.35
LTBP3-206ENST00000526825 SCAF1Q9H7N4 1312 aaKnown RBP23.46■■□□□ 1.35
LTBP3-206ENST00000526825 IQGAP1P46940 1657 aa23.45■■□□□ 1.34
LTBP3-206ENST00000526825 TXNDC2Q86VQ3 553 aa23.45■■□□□ 1.34
LTBP3-206ENST00000526825 CROCC2H7BZ55 1655 aa23.44■■□□□ 1.34
LTBP3-206ENST00000526825 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
LTBP3-206ENST00000526825 UBR1Q8IWV7 1749 aa23.44■■□□□ 1.34
LTBP3-206ENST00000526825 ARHGAP23Q9P227 1491 aa23.43■■□□□ 1.34
LTBP3-206ENST00000526825 KANK1Q14678 1352 aa23.41■■□□□ 1.34
LTBP3-206ENST00000526825 LRRC7Q96NW7 1537 aa23.41■■□□□ 1.34
LTBP3-206ENST00000526825 SCAF11Q99590 1463 aaKnown RBP23.41■■□□□ 1.34
LTBP3-206ENST00000526825 STRCP1A6NGW2 1772 aa23.4■■□□□ 1.34
LTBP3-206ENST00000526825 SLIT1O75093 1534 aa23.4■■□□□ 1.34
LTBP3-206ENST00000526825 IDI1Q13907 227 aa23.4■■□□□ 1.34
LTBP3-206ENST00000526825 ALKQ9UM73 1620 aa23.4■■□□□ 1.34
LTBP3-206ENST00000526825 EID1Q9Y6B2 187 aa23.38■■□□□ 1.33
LTBP3-206ENST00000526825 LMTK2Q8IWU2 1503 aa23.38■■□□□ 1.33
LTBP3-206ENST00000526825 TMEM2Q9UHN6 1383 aa23.36■■□□□ 1.33
LTBP3-206ENST00000526825 STAG3Q9UJ98 1225 aa23.35■■□□□ 1.33
LTBP3-206ENST00000526825 ADGRL2O95490 1459 aa23.33■■□□□ 1.33
LTBP3-206ENST00000526825 FAM50AQ14320 339 aaKnown RBP23.33■■□□□ 1.33
LTBP3-206ENST00000526825 PIK3C2BO00750 1634 aa23.32■■□□□ 1.32
LTBP3-206ENST00000526825 NOS1P29475 1434 aa23.32■■□□□ 1.32
LTBP3-206ENST00000526825 SLC52A1Q9NWF4 448 aa23.3■■□□□ 1.32
LTBP3-206ENST00000526825 SYNMO15061 1565 aa23.27■■□□□ 1.32
LTBP3-206ENST00000526825 ANKRD50Q9ULJ7 1429 aa23.27■■□□□ 1.32
LTBP3-206ENST00000526825 EFCAB6Q5THR3 1501 aa23.27■■□□□ 1.32
LTBP3-206ENST00000526825 KDM5AP29375 1690 aaKnown RBP23.25■■□□□ 1.31
LTBP3-206ENST00000526825 KCNA6P17658 529 aa23.25■■□□□ 1.31
LTBP3-206ENST00000526825 MED1Q15648 1581 aaPredicted RBP23.24■■□□□ 1.31
LTBP3-206ENST00000526825 SLC26A8Q96RN1 970 aa23.24■■□□□ 1.31
LTBP3-206ENST00000526825 TET3O43151 1660 aa23.23■■□□□ 1.31
LTBP3-206ENST00000526825 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
LTBP3-206ENST00000526825 XIRP1Q702N8 1843 aaKnown RBP23.2■■□□□ 1.3
LTBP3-206ENST00000526825 RPRD2Q5VT52 1461 aaKnown RBP23.19■■□□□ 1.3
LTBP3-206ENST00000526825 TMEM94Q12767 1356 aa23.19■■□□□ 1.3
LTBP3-206ENST00000526825 PROSER2Q86WR7 435 aaPredicted RBP23.17■■□□□ 1.3
LTBP3-206ENST00000526825 ADGRB3O60242 1522 aa23.17■■□□□ 1.3
LTBP3-206ENST00000526825 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
LTBP3-206ENST00000526825 RBM33Q96EV2 1170 aaKnown RBP23.15■■□□□ 1.3
LTBP3-206ENST00000526825 FAM135BQ49AJ0 1406 aa23.15■■□□□ 1.3
LTBP3-206ENST00000526825 ROCK1Q13464 1354 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms