RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 NPHP4O75161 1426 aaPredicted RBP22.63■■□□□ 1.21
SSRP1-203ENST00000526696 RNF17Q9BXT8 1623 aaKnown RBP22.62■■□□□ 1.21
SSRP1-203ENST00000526696 ANKLE2Q86XL3 938 aa22.62■■□□□ 1.21
SSRP1-203ENST00000526696 EHMT2Q96KQ7 1210 aa22.62■■□□□ 1.21
SSRP1-203ENST00000526696 GPATCH8Q9UKJ3 1502 aaKnown RBP22.62■■□□□ 1.21
SSRP1-203ENST00000526696 DEPDC5O75140 1603 aa22.6■■□□□ 1.21
SSRP1-203ENST00000526696 ADGBQ8N7X0 1667 aa22.58■■□□□ 1.21
SSRP1-203ENST00000526696 KIAA1107Q9UPP5 1409 aa22.58■■□□□ 1.21
SSRP1-203ENST00000526696 UBTFP17480 764 aaKnown RBP22.57■■□□□ 1.2
SSRP1-203ENST00000526696 IQGAP1P46940 1657 aa22.57■■□□□ 1.2
SSRP1-203ENST00000526696 SETD1AO15047 1707 aaKnown RBP22.57■■□□□ 1.2
SSRP1-203ENST00000526696 CCDC18Q5T9S5 1454 aa22.56■■□□□ 1.2
SSRP1-203ENST00000526696 PZPP20742 1482 aa22.55■■□□□ 1.2
SSRP1-203ENST00000526696 SYNMO15061 1565 aa22.55■■□□□ 1.2
SSRP1-203ENST00000526696 THEMISQ8N1K5 641 aaPredicted RBP22.54■■□□□ 1.2
SSRP1-203ENST00000526696 CASKIN1Q8WXD9 1431 aa22.54■■□□□ 1.2
SSRP1-203ENST00000526696 UGGT1Q9NYU2 1555 aa22.53■■□□□ 1.2
SSRP1-203ENST00000526696 XIRP1Q702N8 1843 aaKnown RBP22.5■■□□□ 1.19
SSRP1-203ENST00000526696 MIA2Q96PC5 1412 aa22.5■■□□□ 1.19
SSRP1-203ENST00000526696 PLEKHH2Q8IVE3 1493 aa22.5■■□□□ 1.19
SSRP1-203ENST00000526696 NLRP1Q9C000 1473 aa22.49■■□□□ 1.19
SSRP1-203ENST00000526696 FAM135AQ9P2D6 1515 aa22.48■■□□□ 1.19
SSRP1-203ENST00000526696 KDM5DQ9BY66 1539 aa22.47■■□□□ 1.19
SSRP1-203ENST00000526696 ZC3H13Q5T200 1668 aaKnown RBP22.47■■□□□ 1.19
SSRP1-203ENST00000526696 CFDP1Q9UEE9 299 aaPredicted RBP22.47■■□□□ 1.19
SSRP1-203ENST00000526696 DHX29Q7Z478 1369 aaKnown RBP22.47■■□□□ 1.19
SSRP1-203ENST00000526696 ZNF644Q9H582 1327 aaPredicted RBP22.44■■□□□ 1.18
SSRP1-203ENST00000526696 MBD5Q9P267 1494 aa22.43■■□□□ 1.18
SSRP1-203ENST00000526696 KIF3BO15066 747 aa22.43■■□□□ 1.18
SSRP1-203ENST00000526696 FAM135BQ49AJ0 1406 aa22.41■■□□□ 1.18
SSRP1-203ENST00000526696 RTEL1-TNFRSF6BF6WH68 1400 aa22.4■■□□□ 1.18
SSRP1-203ENST00000526696 WASHC2CQ9Y4E1 1318 aa22.39■■□□□ 1.18
SSRP1-203ENST00000526696 CCNB3Q8WWL7 1395 aa22.38■■□□□ 1.17
SSRP1-203ENST00000526696 SRCAPQ6ZRS2 3230 aa22.37■■□□□ 1.17
SSRP1-203ENST00000526696 FYCO1Q9BQS8 1478 aa22.37■■□□□ 1.17
SSRP1-203ENST00000526696 UPF1Q92900 1129 aaKnown RBP eCLIP22.35■■□□□ 1.17
SSRP1-203ENST00000526696 ROBO1Q9Y6N7 1651 aa22.33■■□□□ 1.16
SSRP1-203ENST00000526696 SCAF11Q99590 1463 aaKnown RBP22.31■■□□□ 1.16
SSRP1-203ENST00000526696 LTKP29376 864 aa22.31■■□□□ 1.16
SSRP1-203ENST00000526696 UBR1Q8IWV7 1749 aa22.31■■□□□ 1.16
SSRP1-203ENST00000526696 TIAM1Q13009 1591 aa22.3■■□□□ 1.16
SSRP1-203ENST00000526696 NCOA2Q15596 1464 aa22.29■■□□□ 1.16
SSRP1-203ENST00000526696 ERVK-7P63135 1459 aa22.28■■□□□ 1.16
SSRP1-203ENST00000526696 CFAP65Q6ZU64 1925 aaKnown RBP22.27■■□□□ 1.16
SSRP1-203ENST00000526696 ARHGAP23Q9P227 1491 aa22.26■■□□□ 1.15
SSRP1-203ENST00000526696 ABCC3O15438 1527 aa22.26■■□□□ 1.15
SSRP1-203ENST00000526696 TMEM94Q12767 1356 aa22.25■■□□□ 1.15
SSRP1-203ENST00000526696 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
SSRP1-203ENST00000526696 SLIT1O75093 1534 aa22.23■■□□□ 1.15
SSRP1-203ENST00000526696 TXNDC2Q86VQ3 553 aa22.22■■□□□ 1.15
SSRP1-203ENST00000526696 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
SSRP1-203ENST00000526696 RBM33Q96EV2 1170 aaKnown RBP22.21■■□□□ 1.15
SSRP1-203ENST00000526696 MTUS2Q5JR59 1369 aa22.21■■□□□ 1.15
SSRP1-203ENST00000526696 CHIC1Q5VXU3 224 aa22.19■■□□□ 1.14
SSRP1-203ENST00000526696 PHLPP1O60346 1717 aa22.19■■□□□ 1.14
SSRP1-203ENST00000526696 LRP6O75581 1613 aa22.18■■□□□ 1.14
SSRP1-203ENST00000526696 JCADQ9P266 1359 aa22.18■■□□□ 1.14
SSRP1-203ENST00000526696 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
SSRP1-203ENST00000526696 MROH1Q8NDA8 1641 aa22.15■■□□□ 1.14
SSRP1-203ENST00000526696 LRRC9Q6ZRR7 1453 aa22.15■■□□□ 1.14
SSRP1-203ENST00000526696 CAMSAP2Q08AD1 1489 aa22.14■■□□□ 1.13
SSRP1-203ENST00000526696 CEP152O94986 1710 aa22.14■■□□□ 1.13
SSRP1-203ENST00000526696 KCNA6P17658 529 aa22.13■■□□□ 1.13
SSRP1-203ENST00000526696 COL16A1Q07092 1604 aaPredicted RBP22.13■■□□□ 1.13
SSRP1-203ENST00000526696 CEP162Q5TB80 1403 aa22.1■■□□□ 1.13
SSRP1-203ENST00000526696 PROSER2Q86WR7 435 aaPredicted RBP22.1■■□□□ 1.13
SSRP1-203ENST00000526696 PRDM15P57071 1507 aaPredicted RBP22.1■■□□□ 1.13
SSRP1-203ENST00000526696 EHBP1L1Q8N3D4 1523 aa22.1■■□□□ 1.13
SSRP1-203ENST00000526696 RSPH4AQ5TD94 716 aa22.08■■□□□ 1.13
SSRP1-203ENST00000526696 ZNF772Q68DY9 489 aaPredicted RBP22.08■■□□□ 1.13
SSRP1-203ENST00000526696 SLAIN2Q9P270 581 aa22.08■■□□□ 1.13
SSRP1-203ENST00000526696 EID1Q9Y6B2 187 aa22.08■■□□□ 1.13
SSRP1-203ENST00000526696 TMEM2Q9UHN6 1383 aa22.08■■□□□ 1.12
SSRP1-203ENST00000526696 TET3O43151 1660 aa22.07■■□□□ 1.12
SSRP1-203ENST00000526696 PIK3C2BO00750 1634 aa22.07■■□□□ 1.12
SSRP1-203ENST00000526696 ARHGEF5Q12774 1597 aa22.07■■□□□ 1.12
SSRP1-203ENST00000526696 NWD1Q149M9 1564 aa22.05■■□□□ 1.12
SSRP1-203ENST00000526696 SLC26A8Q96RN1 970 aa22.05■■□□□ 1.12
SSRP1-203ENST00000526696 EIF2AK4Q9P2K8 1649 aaKnown RBP22.04■■□□□ 1.12
SSRP1-203ENST00000526696 SPATA31A6Q5VVP1 1343 aa22.04■■□□□ 1.12
SSRP1-203ENST00000526696 RXRBP28702 533 aa22.03■■□□□ 1.12
SSRP1-203ENST00000526696 NKTRP30414 1462 aaKnown RBP22.03■■□□□ 1.12
SSRP1-203ENST00000526696 MSH6P52701 1360 aa22.02■■□□□ 1.12
SSRP1-203ENST00000526696 MEX3CQ5U5Q3 659 aaKnown RBP22.02■■□□□ 1.12
SSRP1-203ENST00000526696 FGD6Q6ZV73 1430 aa22.02■■□□□ 1.12
SSRP1-203ENST00000526696 CDK12Q9NYV4 1490 aaPredicted RBP22.02■■□□□ 1.12
SSRP1-203ENST00000526696 ARHGAP31Q2M1Z3 1444 aa22■■□□□ 1.11
SSRP1-203ENST00000526696 TSPY4P0CV99 314 aa22■■□□□ 1.11
SSRP1-203ENST00000526696 TSPY10P0CW01 314 aa22■■□□□ 1.11
SSRP1-203ENST00000526696 MAST1Q9Y2H9 1570 aa21.99■■□□□ 1.11
SSRP1-203ENST00000526696 SHPRHQ149N8 1683 aa21.98■■□□□ 1.11
SSRP1-203ENST00000526696 KDM5AP29375 1690 aaKnown RBP21.97■■□□□ 1.11
SSRP1-203ENST00000526696 EFCAB6Q5THR3 1501 aa21.96■■□□□ 1.11
SSRP1-203ENST00000526696 AHDC1Q5TGY3 1603 aaPredicted RBP21.94■■□□□ 1.1
SSRP1-203ENST00000526696 RGS12O14924 1447 aa21.93■■□□□ 1.1
SSRP1-203ENST00000526696 IDI1Q13907 227 aa21.92■■□□□ 1.1
SSRP1-203ENST00000526696 STAG3Q9UJ98 1225 aa21.92■■□□□ 1.1
SSRP1-203ENST00000526696 CHD2O14647 1828 aaKnown RBP21.92■■□□□ 1.1
SSRP1-203ENST00000526696 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
SSRP1-203ENST00000526696 AFF2P51816 1311 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms