RNA–Protein interactions for RNA: ENST00000526631.1

CCDC90B-207, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 628 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-207ENST00000526631 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
CCDC90B-207ENST00000526631 CLIP1P30622 1438 aa13.14□□□□□ -0.31
CCDC90B-207ENST00000526631 COL17A1Q9UMD9 1497 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-207ENST00000526631 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
CCDC90B-207ENST00000526631 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
CCDC90B-207ENST00000526631 KDM4FA0A1W2PPD8 638 aa13.12□□□□□ -0.31
CCDC90B-207ENST00000526631 EFCAB2Q5VUJ9 269 aa13.11□□□□□ -0.31
CCDC90B-207ENST00000526631 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
CCDC90B-207ENST00000526631 SNPHO15079 494 aa13.1□□□□□ -0.31
CCDC90B-207ENST00000526631 TMEM106CQ9BVX2 250 aa13.1□□□□□ -0.31
CCDC90B-207ENST00000526631 FANCAO15360 1455 aa13.1□□□□□ -0.31
CCDC90B-207ENST00000526631 DENND4BO75064 1496 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-207ENST00000526631 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
CCDC90B-207ENST00000526631 AKNAQ7Z591 1439 aa13.08□□□□□ -0.32
CCDC90B-207ENST00000526631 PLCH2O75038 1416 aa13.07□□□□□ -0.32
CCDC90B-207ENST00000526631 CASKIN1Q8WXD9 1431 aa13.07□□□□□ -0.32
CCDC90B-207ENST00000526631 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC90B-207ENST00000526631 KIF14Q15058 1648 aa13.06□□□□□ -0.32
CCDC90B-207ENST00000526631 TROQ12816 1431 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-207ENST00000526631 MAGI2Q86UL8 1455 aa13.06□□□□□ -0.32
CCDC90B-207ENST00000526631 POGZQ7Z3K3 1410 aa13.05□□□□□ -0.32
CCDC90B-207ENST00000526631 MYO5CQ9NQX4 1742 aa13.05□□□□□ -0.32
CCDC90B-207ENST00000526631 CDK13Q14004 1512 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-207ENST00000526631 RAPGEF3O95398 923 aa13.05□□□□□ -0.32
CCDC90B-207ENST00000526631 ARID4BQ4LE39 1312 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-207ENST00000526631 EMP3P54852 163 aa13.04□□□□□ -0.32
CCDC90B-207ENST00000526631 HS3ST6Q96QI5 342 aa13.04□□□□□ -0.32
CCDC90B-207ENST00000526631 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
CCDC90B-207ENST00000526631 OCEL1Q9H607 264 aa13.01□□□□□ -0.33
CCDC90B-207ENST00000526631 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.01□□□□□ -0.33
CCDC90B-207ENST00000526631 TTC37Q6PGP7 1564 aa13.01□□□□□ -0.33
CCDC90B-207ENST00000526631 SCAPERQ9BY12 1400 aa13□□□□□ -0.33
CCDC90B-207ENST00000526631 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
CCDC90B-207ENST00000526631 MYT1LQ9UL68 1186 aa12.99□□□□□ -0.33
CCDC90B-207ENST00000526631 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
CCDC90B-207ENST00000526631 ZMYM4Q5VZL5 1548 aa12.98□□□□□ -0.33
CCDC90B-207ENST00000526631 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
CCDC90B-207ENST00000526631 FAM205CA6NFA0 338 aa12.97□□□□□ -0.33
CCDC90B-207ENST00000526631 MIER1Q8N108 512 aa12.97□□□□□ -0.33
CCDC90B-207ENST00000526631 ZFYVE16Q7Z3T8 1539 aa12.97□□□□□ -0.33
CCDC90B-207ENST00000526631 PCF11O94913 1555 aaKnown RBP12.96□□□□□ -0.33
CCDC90B-207ENST00000526631 ARHGEF40Q8TER5 1519 aa12.96□□□□□ -0.33
CCDC90B-207ENST00000526631 NUBP1P53384 320 aa12.95□□□□□ -0.34
CCDC90B-207ENST00000526631 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
CCDC90B-207ENST00000526631 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
CCDC90B-207ENST00000526631 ATP10AO60312 1499 aa12.93□□□□□ -0.34
CCDC90B-207ENST00000526631 PLEKHH2Q8IVE3 1493 aa12.93□□□□□ -0.34
CCDC90B-207ENST00000526631 BCORL1Q5H9F3 1711 aa12.93□□□□□ -0.34
CCDC90B-207ENST00000526631 ESF1Q9H501 851 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-207ENST00000526631 ADAMTSL3P82987 1691 aa12.92□□□□□ -0.34
CCDC90B-207ENST00000526631 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
CCDC90B-207ENST00000526631 LRRIQ1Q96JM4 1722 aa12.91□□□□□ -0.34
CCDC90B-207ENST00000526631 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
CCDC90B-207ENST00000526631 CCNB3Q8WWL7 1395 aa12.91□□□□□ -0.34
CCDC90B-207ENST00000526631 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
CCDC90B-207ENST00000526631 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-207ENST00000526631 CDC42BPBQ9Y5S2 1711 aa12.9□□□□□ -0.34
CCDC90B-207ENST00000526631 PTPRMP28827 1452 aa12.9□□□□□ -0.34
CCDC90B-207ENST00000526631 RSPH4AQ5TD94 716 aa12.88□□□□□ -0.35
CCDC90B-207ENST00000526631 ZNF777Q9ULD5 760 aaPredicted RBP12.88□□□□□ -0.35
CCDC90B-207ENST00000526631 MLH3Q9UHC1 1453 aa12.88□□□□□ -0.35
CCDC90B-207ENST00000526631 KDM5CP41229 1560 aa12.87□□□□□ -0.35
CCDC90B-207ENST00000526631 HECW2Q9P2P5 1572 aa12.87□□□□□ -0.35
CCDC90B-207ENST00000526631 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
CCDC90B-207ENST00000526631 AFAP1Q8N556 730 aa12.87□□□□□ -0.35
CCDC90B-207ENST00000526631 PDCD7Q8N8D1 485 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-207ENST00000526631 KIAA1107Q9UPP5 1409 aa12.87□□□□□ -0.35
CCDC90B-207ENST00000526631 CDC42BPAQ5VT25 1732 aa12.86□□□□□ -0.35
CCDC90B-207ENST00000526631 EHBP1L1Q8N3D4 1523 aa12.86□□□□□ -0.35
CCDC90B-207ENST00000526631 YEATS2Q9ULM3 1422 aa12.86□□□□□ -0.35
CCDC90B-207ENST00000526631 ITSN2Q9NZM3 1697 aa12.85□□□□□ -0.35
CCDC90B-207ENST00000526631 REREQ9P2R6 1566 aa12.85□□□□□ -0.35
CCDC90B-207ENST00000526631 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-207ENST00000526631 SPAG9O60271 1321 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-207ENST00000526631 MADDQ8WXG6 1647 aa12.84□□□□□ -0.35
CCDC90B-207ENST00000526631 ABCC1P33527 1531 aa12.84□□□□□ -0.35
CCDC90B-207ENST00000526631 GPATCH8Q9UKJ3 1502 aaKnown RBP12.83□□□□□ -0.35
CCDC90B-207ENST00000526631 MLECQ14165 292 aa12.83□□□□□ -0.36
CCDC90B-207ENST00000526631 RIMS1Q86UR5 1692 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-207ENST00000526631 FER1L4A9Z1Z3 1794 aa12.82□□□□□ -0.36
CCDC90B-207ENST00000526631 SUPT6HQ7KZ85 1726 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-207ENST00000526631 AGLP35573 1532 aa12.81□□□□□ -0.36
CCDC90B-207ENST00000526631 VPS8Q8N3P4 1428 aa12.8□□□□□ -0.36
CCDC90B-207ENST00000526631 CNTLNQ9NXG0 1405 aa12.8□□□□□ -0.36
CCDC90B-207ENST00000526631 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
CCDC90B-207ENST00000526631 MAP3K1Q13233 1512 aa12.78□□□□□ -0.36
CCDC90B-207ENST00000526631 ARHGEF12Q9NZN5 1544 aa12.78□□□□□ -0.36
CCDC90B-207ENST00000526631 DIP2CQ9Y2E4 1556 aa12.78□□□□□ -0.36
CCDC90B-207ENST00000526631 HNRNPMP52272 730 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCDC90B-207ENST00000526631 RNF166Q96A37 237 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-207ENST00000526631 TSPY4P0CV99 314 aa12.77□□□□□ -0.37
CCDC90B-207ENST00000526631 TSPY10P0CW01 314 aa12.77□□□□□ -0.37
CCDC90B-207ENST00000526631 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
CCDC90B-207ENST00000526631 SYCP2Q9BX26 1530 aa12.77□□□□□ -0.37
CCDC90B-207ENST00000526631 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.37
CCDC90B-207ENST00000526631 LOC105371045A0A1W2PR82 267 aa12.76□□□□□ -0.37
CCDC90B-207ENST00000526631 RTEL1-TNFRSF6BF6WH68 1400 aa12.76□□□□□ -0.37
CCDC90B-207ENST00000526631 ATP7AQ04656 1500 aa12.75□□□□□ -0.37
CCDC90B-207ENST00000526631 TIAM1Q13009 1591 aa12.75□□□□□ -0.37
CCDC90B-207ENST00000526631 KIDINS220Q9ULH0 1771 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms