RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 NUDCQ9Y266 331 aa9.49□□□□□ -0.89
LRRK1-205ENST00000526457 TPD52L1Q16890 204 aaPredicted RBP9.49□□□□□ -0.89
LRRK1-205ENST00000526457 IFT57Q9NWB7 429 aa9.49□□□□□ -0.89
LRRK1-205ENST00000526457 U2SURPO15042 1029 aaKnown RBP9.49□□□□□ -0.89
LRRK1-205ENST00000526457 CC2D1BQ5T0F9 858 aaKnown RBP9.48□□□□□ -0.89
LRRK1-205ENST00000526457 RASSF8Q8NHQ8 419 aa9.48□□□□□ -0.89
LRRK1-205ENST00000526457 PHLDB1Q86UU1 1377 aa9.48□□□□□ -0.89
LRRK1-205ENST00000526457 SLC4A3P48751 1232 aa9.48□□□□□ -0.89
LRRK1-205ENST00000526457 CCDC39Q9UFE4 941 aa9.48□□□□□ -0.89
LRRK1-205ENST00000526457 USP8P40818 1118 aa9.47□□□□□ -0.89
LRRK1-205ENST00000526457 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
LRRK1-205ENST00000526457 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
LRRK1-205ENST00000526457 BCL11BQ9C0K0 894 aaPredicted RBP9.47□□□□□ -0.89
LRRK1-205ENST00000526457 SF3A1Q15459 793 aaKnown RBP9.47□□□□□ -0.89
LRRK1-205ENST00000526457 NASPP49321 788 aaPredicted RBP9.47□□□□□ -0.89
LRRK1-205ENST00000526457 IPO8O15397 1037 aaKnown RBP9.47□□□□□ -0.89
LRRK1-205ENST00000526457 PMFBP1Q8TBY8 1022 aa9.46□□□□□ -0.89
LRRK1-205ENST00000526457 KIAA0754O94854 1291 aa9.46□□□□□ -0.89
LRRK1-205ENST00000526457 IPO7O95373 1038 aaKnown RBP9.46□□□□□ -0.89
LRRK1-205ENST00000526457 INCENPQ9NQS7 918 aa9.46□□□□□ -0.89
LRRK1-205ENST00000526457 ITPRIPQ8IWB1 547 aa9.46□□□□□ -0.9
LRRK1-205ENST00000526457 ATP6V1DQ9Y5K8 247 aa9.45□□□□□ -0.9
LRRK1-205ENST00000526457 UBE2Q2Q8WVN8 375 aa9.45□□□□□ -0.9
LRRK1-205ENST00000526457 HMGN5P82970 282 aaKnown RBP9.45□□□□□ -0.9
LRRK1-205ENST00000526457 ROCK2O75116 1388 aaKnown RBP9.44□□□□□ -0.9
LRRK1-205ENST00000526457 FOXD4L6Q3SYB3 417 aaPredicted RBP9.44□□□□□ -0.9
LRRK1-205ENST00000526457 FOXD4L3Q6VB84 417 aaPredicted RBP9.44□□□□□ -0.9
LRRK1-205ENST00000526457 GPATCH3Q96I76 525 aa9.44□□□□□ -0.9
LRRK1-205ENST00000526457 PDE4AP27815 886 aa9.44□□□□□ -0.9
LRRK1-205ENST00000526457 SETD5Q9C0A6 1442 aa9.44□□□□□ -0.9
LRRK1-205ENST00000526457 SENP3Q9H4L4 574 aaPredicted RBP9.44□□□□□ -0.9
LRRK1-205ENST00000526457 TRIM6-TRIM34B2RNG4 842 aa9.43□□□□□ -0.9
LRRK1-205ENST00000526457 ZRSR2Q15696 482 aaKnown RBP9.43□□□□□ -0.9
LRRK1-205ENST00000526457 GIMAP7Q8NHV1 300 aa9.43□□□□□ -0.9
LRRK1-205ENST00000526457 CARD11Q9BXL7 1154 aa9.43□□□□□ -0.9
LRRK1-205ENST00000526457 RRP7BPQ9NSQ0 103 aa9.43□□□□□ -0.9
LRRK1-205ENST00000526457 FAM161AQ3B820 660 aa9.43□□□□□ -0.9
LRRK1-205ENST00000526457 H3BQV1 296 aa9.43□□□□□ -0.9
LRRK1-205ENST00000526457 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
LRRK1-205ENST00000526457 ERICH4A6NGS2 130 aa9.43□□□□□ -0.9
LRRK1-205ENST00000526457 ERCC4Q92889 916 aaPredicted RBP9.43□□□□□ -0.9
LRRK1-205ENST00000526457 RBM25P49756 843 aaKnown RBP9.42□□□□□ -0.9
LRRK1-205ENST00000526457 MRE11P49959 708 aa9.42□□□□□ -0.9
LRRK1-205ENST00000526457 AXDND1Q5T1B0 1012 aaPredicted RBP9.42□□□□□ -0.9
LRRK1-205ENST00000526457 TOP2AP11388 1531 aaKnown RBP9.42□□□□□ -0.9
LRRK1-205ENST00000526457 NPHP1O15259 732 aa9.41□□□□□ -0.9
LRRK1-205ENST00000526457 UQCRHLA0A096LP55 91 aa9.4□□□□□ -0.9
LRRK1-205ENST00000526457 UQCRHP07919 91 aa9.4□□□□□ -0.9
LRRK1-205ENST00000526457 FMN1Q68DA7 1419 aa9.4□□□□□ -0.9
LRRK1-205ENST00000526457 GPATCH11Q8N954 259 aa9.4□□□□□ -0.9
LRRK1-205ENST00000526457 SKIDA1Q1XH10 827 aa9.4□□□□□ -0.9
LRRK1-205ENST00000526457 NEXNQ0ZGT2 675 aa9.4□□□□□ -0.9
LRRK1-205ENST00000526457 GOLGA6L7A0A1B0GV03 622 aa9.4□□□□□ -0.91
LRRK1-205ENST00000526457 ANKRD20A12PQ8NF67 263 aa9.4□□□□□ -0.91
LRRK1-205ENST00000526457 CAGE1Q8TC20 777 aa9.4□□□□□ -0.91
LRRK1-205ENST00000526457 RSPH4AQ5TD94 716 aa9.4□□□□□ -0.91
LRRK1-205ENST00000526457 RGL3Q3MIN7 710 aa9.39□□□□□ -0.91
LRRK1-205ENST00000526457 CT47B1P0C2W7 299 aaPredicted RBP9.39□□□□□ -0.91
LRRK1-205ENST00000526457 PCMTD1Q96MG8 357 aaPredicted RBP9.39□□□□□ -0.91
LRRK1-205ENST00000526457 NFKBIBQ15653 356 aa9.39□□□□□ -0.91
LRRK1-205ENST00000526457 CENPHQ9H3R5 247 aa9.39□□□□□ -0.91
LRRK1-205ENST00000526457 PRDM10Q9NQV6 1147 aa9.38□□□□□ -0.91
LRRK1-205ENST00000526457 GORABQ5T7V8 394 aa9.38□□□□□ -0.91
LRRK1-205ENST00000526457 CHMP4AQ9BY43 222 aa9.38□□□□□ -0.91
LRRK1-205ENST00000526457 KTN1Q86UP2 1357 aaKnown RBP9.38□□□□□ -0.91
LRRK1-205ENST00000526457 RALBP1Q15311 655 aa9.38□□□□□ -0.91
LRRK1-205ENST00000526457 CHMP5Q9NZZ3 219 aa9.38□□□□□ -0.91
LRRK1-205ENST00000526457 CHMP3Q9Y3E7 222 aa9.38□□□□□ -0.91
LRRK1-205ENST00000526457 WIZO95785 1651 aa9.37□□□□□ -0.91
LRRK1-205ENST00000526457 DHX37Q8IY37 1157 aaKnown RBP9.37□□□□□ -0.91
LRRK1-205ENST00000526457 NAP1L1P55209 391 aaKnown RBP9.37□□□□□ -0.91
LRRK1-205ENST00000526457 CENPQQ7L2Z9 268 aaPredicted RBP9.37□□□□□ -0.91
LRRK1-205ENST00000526457 MCTP1Q6DN14 999 aa9.37□□□□□ -0.91
LRRK1-205ENST00000526457 ZMYND15Q9H091 742 aa9.36□□□□□ -0.91
LRRK1-205ENST00000526457 IPO4Q8TEX9 1081 aaKnown RBP9.36□□□□□ -0.91
LRRK1-205ENST00000526457 PDIA4P13667 645 aaKnown RBP9.36□□□□□ -0.91
LRRK1-205ENST00000526457 CCDC173Q0VFZ6 552 aa9.36□□□□□ -0.91
LRRK1-205ENST00000526457 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
LRRK1-205ENST00000526457 CGNQ9P2M7 1197 aaKnown RBP9.36□□□□□ -0.91
LRRK1-205ENST00000526457 PDE3BQ13370 1112 aa9.36□□□□□ -0.91
LRRK1-205ENST00000526457 IRX3P78415 501 aaPredicted RBP9.36□□□□□ -0.91
LRRK1-205ENST00000526457 ZHX1Q9UKY1 873 aaPredicted RBP9.35□□□□□ -0.91
LRRK1-205ENST00000526457 MYO6Q9UM54 1294 aa9.35□□□□□ -0.91
LRRK1-205ENST00000526457 FBXW7Q969H0 707 aa9.35□□□□□ -0.91
LRRK1-205ENST00000526457 PPP1R15AO75807 674 aaPredicted RBP9.35□□□□□ -0.91
LRRK1-205ENST00000526457 NPM1P06748 294 aaKnown RBP eCLIP9.35□□□□□ -0.91
LRRK1-205ENST00000526457 FAM184AQ8NB25 1140 aa9.35□□□□□ -0.91
LRRK1-205ENST00000526457 E9PSI1 815 aa9.35□□□□□ -0.91
LRRK1-205ENST00000526457 TNNT1P13805 278 aa9.35□□□□□ -0.91
LRRK1-205ENST00000526457 SASS6Q6UVJ0 657 aa9.35□□□□□ -0.91
LRRK1-205ENST00000526457 HOOK1Q9UJC3 728 aaKnown RBP9.35□□□□□ -0.91
LRRK1-205ENST00000526457 CALCOCO1Q9P1Z2 691 aa9.35□□□□□ -0.91
LRRK1-205ENST00000526457 CLASRPQ8N2M8 674 aaKnown RBP9.34□□□□□ -0.91
LRRK1-205ENST00000526457 BICD2Q8TD16 824 aa9.34□□□□□ -0.91
LRRK1-205ENST00000526457 EIF3AQ14152 1382 aaKnown RBP9.34□□□□□ -0.91
LRRK1-205ENST00000526457 CCDC9Q9Y3X0 531 aaKnown RBP9.34□□□□□ -0.91
LRRK1-205ENST00000526457 GOLGA6L10A6NI86 522 aa9.34□□□□□ -0.91
LRRK1-205ENST00000526457 CCP110O43303 1012 aa9.33□□□□□ -0.92
LRRK1-205ENST00000526457 TICAM2Q86XR7 235 aa9.33□□□□□ -0.92
LRRK1-205ENST00000526457 SIN3AQ96ST3 1273 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms