RNA–Protein interactions for RNA: ENST00000526279.5

PDZD3-204, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-204ENST00000526279 MED1Q15648 1581 aaPredicted RBP22.53■■□□□ 1.2
PDZD3-204ENST00000526279 ZNF644Q9H582 1327 aaPredicted RBP22.53■■□□□ 1.2
PDZD3-204ENST00000526279 CPS1P31327 1500 aa22.52■■□□□ 1.2
PDZD3-204ENST00000526279 PZPP20742 1482 aa22.52■■□□□ 1.2
PDZD3-204ENST00000526279 VWDEQ8N2E2 1590 aa22.5■■□□□ 1.19
PDZD3-204ENST00000526279 DHX29Q7Z478 1369 aaKnown RBP22.49■■□□□ 1.19
PDZD3-204ENST00000526279 CEP162Q5TB80 1403 aa22.48■■□□□ 1.19
PDZD3-204ENST00000526279 TNRQ92752 1358 aa22.48■■□□□ 1.19
PDZD3-204ENST00000526279 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
PDZD3-204ENST00000526279 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
PDZD3-204ENST00000526279 ALKQ9UM73 1620 aa22.47■■□□□ 1.19
PDZD3-204ENST00000526279 DEPDC5O75140 1603 aa22.46■■□□□ 1.19
PDZD3-204ENST00000526279 CAMSAP2Q08AD1 1489 aa22.45■■□□□ 1.18
PDZD3-204ENST00000526279 HSPA1LP34931 641 aa22.42■■□□□ 1.18
PDZD3-204ENST00000526279 FBXO31Q5XUX0 539 aaPredicted RBP22.42■■□□□ 1.18
PDZD3-204ENST00000526279 NLRP1Q9C000 1473 aa22.41■■□□□ 1.18
PDZD3-204ENST00000526279 IQGAP1P46940 1657 aa22.41■■□□□ 1.18
PDZD3-204ENST00000526279 RNF17Q9BXT8 1623 aaKnown RBP22.41■■□□□ 1.18
PDZD3-204ENST00000526279 MED14O60244 1454 aa22.41■■□□□ 1.18
PDZD3-204ENST00000526279 ARHGEF5Q12774 1597 aa22.4■■□□□ 1.18
PDZD3-204ENST00000526279 UGGT1Q9NYU2 1555 aa22.4■■□□□ 1.18
PDZD3-204ENST00000526279 STRCP1A6NGW2 1772 aa22.4■■□□□ 1.18
PDZD3-204ENST00000526279 NCOA2Q15596 1464 aa22.4■■□□□ 1.18
PDZD3-204ENST00000526279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.38■■□□□ 1.17
PDZD3-204ENST00000526279 KIF3BO15066 747 aa22.38■■□□□ 1.17
PDZD3-204ENST00000526279 ZC3H13Q5T200 1668 aaKnown RBP22.38■■□□□ 1.17
PDZD3-204ENST00000526279 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
PDZD3-204ENST00000526279 PIP4K2BP78356 416 aa22.36■■□□□ 1.17
PDZD3-204ENST00000526279 NPHP4O75161 1426 aaPredicted RBP22.36■■□□□ 1.17
PDZD3-204ENST00000526279 MIA2Q96PC5 1412 aa22.36■■□□□ 1.17
PDZD3-204ENST00000526279 SYNMO15061 1565 aa22.36■■□□□ 1.17
PDZD3-204ENST00000526279 TOM1O60784 492 aa22.34■■□□□ 1.17
PDZD3-204ENST00000526279 ABCC3O15438 1527 aa22.34■■□□□ 1.17
PDZD3-204ENST00000526279 WASHC2CQ9Y4E1 1318 aa22.32■■□□□ 1.16
PDZD3-204ENST00000526279 MROH1Q8NDA8 1641 aa22.32■■□□□ 1.16
PDZD3-204ENST00000526279 EIF2AK4Q9P2K8 1649 aaKnown RBP22.32■■□□□ 1.16
PDZD3-204ENST00000526279 MAST1Q9Y2H9 1570 aa22.32■■□□□ 1.16
PDZD3-204ENST00000526279 ANKLE2Q86XL3 938 aa22.31■■□□□ 1.16
PDZD3-204ENST00000526279 THEMISQ8N1K5 641 aaPredicted RBP22.29■■□□□ 1.16
PDZD3-204ENST00000526279 CEP152O94986 1710 aa22.28■■□□□ 1.16
PDZD3-204ENST00000526279 UBR1Q8IWV7 1749 aa22.28■■□□□ 1.16
PDZD3-204ENST00000526279 LRRC7Q96NW7 1537 aa22.28■■□□□ 1.16
PDZD3-204ENST00000526279 ERVK-7P63135 1459 aa22.28■■□□□ 1.16
PDZD3-204ENST00000526279 RSPH4AQ5TD94 716 aa22.25■■□□□ 1.15
PDZD3-204ENST00000526279 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
PDZD3-204ENST00000526279 SCAF11Q99590 1463 aaKnown RBP22.19■■□□□ 1.14
PDZD3-204ENST00000526279 CFAP65Q6ZU64 1925 aaKnown RBP22.19■■□□□ 1.14
PDZD3-204ENST00000526279 LRRC9Q6ZRR7 1453 aa22.18■■□□□ 1.14
PDZD3-204ENST00000526279 SLIT1O75093 1534 aa22.17■■□□□ 1.14
PDZD3-204ENST00000526279 PRDM15P57071 1507 aaPredicted RBP22.17■■□□□ 1.14
PDZD3-204ENST00000526279 ARHGAP23Q9P227 1491 aa22.17■■□□□ 1.14
PDZD3-204ENST00000526279 TSPY4P0CV99 314 aa22.16■■□□□ 1.14
PDZD3-204ENST00000526279 TSPY10P0CW01 314 aa22.16■■□□□ 1.14
PDZD3-204ENST00000526279 PHF23Q9BUL5 403 aaPredicted RBP22.16■■□□□ 1.14
PDZD3-204ENST00000526279 CROCC2H7BZ55 1655 aa22.15■■□□□ 1.14
PDZD3-204ENST00000526279 DUOX2Q9NRD8 1548 aa22.14■■□□□ 1.13
PDZD3-204ENST00000526279 PIK3C2BO00750 1634 aa22.11■■□□□ 1.13
PDZD3-204ENST00000526279 VPS8Q8N3P4 1428 aa22.1■■□□□ 1.13
PDZD3-204ENST00000526279 ARHGAP31Q2M1Z3 1444 aa22.09■■□□□ 1.13
PDZD3-204ENST00000526279 MYOM3Q5VTT5 1437 aa22.09■■□□□ 1.13
PDZD3-204ENST00000526279 SENP3Q9H4L4 574 aaPredicted RBP22.09■■□□□ 1.13
PDZD3-204ENST00000526279 KDM5AP29375 1690 aaKnown RBP22.08■■□□□ 1.13
PDZD3-204ENST00000526279 MAP3K1Q13233 1512 aa22.06■■□□□ 1.12
PDZD3-204ENST00000526279 LTKP29376 864 aa22.06■■□□□ 1.12
PDZD3-204ENST00000526279 ERBINQ96RT1 1412 aa22.05■■□□□ 1.12
PDZD3-204ENST00000526279 RGS17Q9UGC6 210 aaPredicted RBP22.03■■□□□ 1.12
PDZD3-204ENST00000526279 KIF15Q9NS87 1388 aa22.02■■□□□ 1.12
PDZD3-204ENST00000526279 ROBO1Q9Y6N7 1651 aa22.01■■□□□ 1.11
PDZD3-204ENST00000526279 TMEM2Q9UHN6 1383 aa22■■□□□ 1.11
PDZD3-204ENST00000526279 TXNDC2Q86VQ3 553 aa22■■□□□ 1.11
PDZD3-204ENST00000526279 EFCAB6Q5THR3 1501 aa22■■□□□ 1.11
PDZD3-204ENST00000526279 KANK4Q5T7N3 995 aaPredicted RBP21.99■■□□□ 1.11
PDZD3-204ENST00000526279 NWD1Q149M9 1564 aa21.99■■□□□ 1.11
PDZD3-204ENST00000526279 PTPN23Q9H3S7 1636 aa21.98■■□□□ 1.11
PDZD3-204ENST00000526279 ABCC5O15440 1437 aa21.98■■□□□ 1.11
PDZD3-204ENST00000526279 FAM135BQ49AJ0 1406 aa21.98■■□□□ 1.11
PDZD3-204ENST00000526279 LMTK2Q8IWU2 1503 aa21.98■■□□□ 1.11
PDZD3-204ENST00000526279 TET3O43151 1660 aa21.98■■□□□ 1.11
PDZD3-204ENST00000526279 TMEM94Q12767 1356 aa21.95■■□□□ 1.1
PDZD3-204ENST00000526279 ADGRB3O60242 1522 aa21.95■■□□□ 1.1
PDZD3-204ENST00000526279 EID1Q9Y6B2 187 aa21.94■■□□□ 1.1
PDZD3-204ENST00000526279 NKTRP30414 1462 aaKnown RBP21.93■■□□□ 1.1
PDZD3-204ENST00000526279 DAPK1P53355 1430 aa21.92■■□□□ 1.1
PDZD3-204ENST00000526279 SETD1AO15047 1707 aaKnown RBP21.9■■□□□ 1.1
PDZD3-204ENST00000526279 NOS1P29475 1434 aa21.89■■□□□ 1.09
PDZD3-204ENST00000526279 RRP7BPQ9NSQ0 103 aa21.88■■□□□ 1.09
PDZD3-204ENST00000526279 KANK1Q14678 1352 aa21.87■■□□□ 1.09
PDZD3-204ENST00000526279 MYO5BQ9ULV0 1848 aa21.87■■□□□ 1.09
PDZD3-204ENST00000526279 PHLPP1O60346 1717 aa21.86■■□□□ 1.09
PDZD3-204ENST00000526279 POTEAQ6S8J7 498 aa21.86■■□□□ 1.09
PDZD3-204ENST00000526279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.09
PDZD3-204ENST00000526279 KCNA6P17658 529 aa21.85■■□□□ 1.09
PDZD3-204ENST00000526279 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
PDZD3-204ENST00000526279 IDI1Q13907 227 aa21.84■■□□□ 1.09
PDZD3-204ENST00000526279 CHD2O14647 1828 aaKnown RBP21.83■■□□□ 1.09
PDZD3-204ENST00000526279 GCC2Q8IWJ2 1684 aa21.83■■□□□ 1.09
PDZD3-204ENST00000526279 SLC26A8Q96RN1 970 aa21.83■■□□□ 1.09
PDZD3-204ENST00000526279 STAG3Q9UJ98 1225 aa21.83■■□□□ 1.09
PDZD3-204ENST00000526279 COL16A1Q07092 1604 aaPredicted RBP21.82■■□□□ 1.08
PDZD3-204ENST00000526279 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms