RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 MAGI2Q86UL8 1455 aa21.35■■□□□ 1.01
COLCA2-202ENST00000526216 EIF2AK4Q9P2K8 1649 aaKnown RBP21.35■■□□□ 1.01
COLCA2-202ENST00000526216 DEPDC5O75140 1603 aa21.33■■□□□ 1
COLCA2-202ENST00000526216 ARHGEF40Q8TER5 1519 aa21.32■■□□□ 1
COLCA2-202ENST00000526216 TRIM52Q96A61 297 aa21.31■■□□□ 1
COLCA2-202ENST00000526216 MROH1Q8NDA8 1641 aa21.31■■□□□ 1
COLCA2-202ENST00000526216 BCORL1Q5H9F3 1711 aa21.31■■□□□ 1
COLCA2-202ENST00000526216 SIGLEC1Q9BZZ2 1709 aa21.29■■□□□ 1
COLCA2-202ENST00000526216 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
COLCA2-202ENST00000526216 RNF17Q9BXT8 1623 aaKnown RBP21.28■■□□□ 1
COLCA2-202ENST00000526216 REREQ9P2R6 1566 aa21.28■■□□□ 1
COLCA2-202ENST00000526216 IQGAP3Q86VI3 1631 aa21.28■■□□□ 1
COLCA2-202ENST00000526216 NUP155O75694 1391 aa21.26■□□□□ 0.99
COLCA2-202ENST00000526216 ATP10AO60312 1499 aa21.26■□□□□ 0.99
COLCA2-202ENST00000526216 ACIN1Q9UKV3 1341 aaKnown RBP21.26■□□□□ 0.99
COLCA2-202ENST00000526216 VWDEQ8N2E2 1590 aa21.26■□□□□ 0.99
COLCA2-202ENST00000526216 MPHOSPH9Q99550 1183 aa21.26■□□□□ 0.99
COLCA2-202ENST00000526216 PRDM15P57071 1507 aaPredicted RBP21.26■□□□□ 0.99
COLCA2-202ENST00000526216 FAM135AQ9P2D6 1515 aa21.26■□□□□ 0.99
COLCA2-202ENST00000526216 KIF3BO15066 747 aa21.23■□□□□ 0.99
COLCA2-202ENST00000526216 CLSPNQ9HAW4 1339 aa21.2■□□□□ 0.99
COLCA2-202ENST00000526216 AGLP35573 1532 aa21.2■□□□□ 0.98
COLCA2-202ENST00000526216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.2■□□□□ 0.982e-6■□□□□ 10.7
COLCA2-202ENST00000526216 SLC4A1APQ9BWU0 796 aaKnown RBP21.19■□□□□ 0.98
COLCA2-202ENST00000526216 CEP152O94986 1710 aa21.16■□□□□ 0.98
COLCA2-202ENST00000526216 PKD2Q13563 968 aa21.15■□□□□ 0.98
COLCA2-202ENST00000526216 LMTK2Q8IWU2 1503 aa21.14■□□□□ 0.98
COLCA2-202ENST00000526216 TET3O43151 1660 aa21.14■□□□□ 0.97
COLCA2-202ENST00000526216 ANKRD30BQ9BXX2 1392 aa21.13■□□□□ 0.97
COLCA2-202ENST00000526216 E9PCH4 1651 aa21.12■□□□□ 0.97
COLCA2-202ENST00000526216 SIN3AQ96ST3 1273 aa21.12■□□□□ 0.97
COLCA2-202ENST00000526216 ABCC3O15438 1527 aa21.12■□□□□ 0.97
COLCA2-202ENST00000526216 KANK1Q14678 1352 aa21.1■□□□□ 0.97
COLCA2-202ENST00000526216 GGT6Q6P531 493 aa21.1■□□□□ 0.97
COLCA2-202ENST00000526216 EFCAB6Q5THR3 1501 aa21.09■□□□□ 0.97
COLCA2-202ENST00000526216 PLA2R1Q13018 1463 aa21.08■□□□□ 0.96
COLCA2-202ENST00000526216 ZC3H13Q5T200 1668 aaKnown RBP21.07■□□□□ 0.96
COLCA2-202ENST00000526216 CAMSAP1Q5T5Y3 1602 aa21.06■□□□□ 0.96
COLCA2-202ENST00000526216 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
COLCA2-202ENST00000526216 NEUROD1Q13562 356 aa21.02■□□□□ 0.95
COLCA2-202ENST00000526216 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
COLCA2-202ENST00000526216 SPHKAPQ2M3C7 1700 aa21.01■□□□□ 0.95
COLCA2-202ENST00000526216 PTPRTO14522 1441 aa21.01■□□□□ 0.95
COLCA2-202ENST00000526216 CLTCQ00610 1675 aaKnown RBP21.01■□□□□ 0.95
COLCA2-202ENST00000526216 NPATQ14207 1427 aa21■□□□□ 0.95
COLCA2-202ENST00000526216 WASHC2CQ9Y4E1 1318 aa20.99■□□□□ 0.95
COLCA2-202ENST00000526216 TRPM2O94759 1503 aa20.99■□□□□ 0.95
COLCA2-202ENST00000526216 MLECQ14165 292 aa20.99■□□□□ 0.95
COLCA2-202ENST00000526216 ARHGAP31Q2M1Z3 1444 aa20.97■□□□□ 0.95
COLCA2-202ENST00000526216 CLTCL1P53675 1640 aa20.95■□□□□ 0.94
COLCA2-202ENST00000526216 ARID4BQ4LE39 1312 aaPredicted RBP20.95■□□□□ 0.94
COLCA2-202ENST00000526216 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
COLCA2-202ENST00000526216 UGGT1Q9NYU2 1555 aa20.93■□□□□ 0.94
COLCA2-202ENST00000526216 NOS1P29475 1434 aa20.92■□□□□ 0.94
COLCA2-202ENST00000526216 SYNMO15061 1565 aa20.92■□□□□ 0.94
COLCA2-202ENST00000526216 PREX1Q8TCU6 1659 aa20.91■□□□□ 0.94
COLCA2-202ENST00000526216 CCDC144AA2RUR9 1427 aa20.9■□□□□ 0.94
COLCA2-202ENST00000526216 TONSLQ96HA7 1378 aa20.89■□□□□ 0.93
COLCA2-202ENST00000526216 CNTLNQ9NXG0 1405 aa20.89■□□□□ 0.93
COLCA2-202ENST00000526216 MROH2AA6NES4 1674 aa20.88■□□□□ 0.93
COLCA2-202ENST00000526216 FER1L4A9Z1Z3 1794 aa20.87■□□□□ 0.93
COLCA2-202ENST00000526216 TIMELESSQ9UNS1 1208 aa20.87■□□□□ 0.93
COLCA2-202ENST00000526216 ERVK-7P63135 1459 aa20.87■□□□□ 0.93
COLCA2-202ENST00000526216 PIK3C2BO00750 1634 aa20.87■□□□□ 0.93
COLCA2-202ENST00000526216 CFAP65Q6ZU64 1925 aaKnown RBP20.87■□□□□ 0.93
COLCA2-202ENST00000526216 SPATA31D1Q6ZQQ2 1576 aa20.85■□□□□ 0.93
COLCA2-202ENST00000526216 ADAMTSL3P82987 1691 aa20.85■□□□□ 0.93
COLCA2-202ENST00000526216 MADDQ8WXG6 1647 aa20.85■□□□□ 0.93
COLCA2-202ENST00000526216 SPATA31E1Q6ZUB1 1445 aa20.84■□□□□ 0.93
COLCA2-202ENST00000526216 L3MBTL2Q969R5 705 aa20.84■□□□□ 0.93
COLCA2-202ENST00000526216 ZMYM3Q14202 1370 aa20.83■□□□□ 0.93
COLCA2-202ENST00000526216 FBXO31Q5XUX0 539 aaPredicted RBP20.83■□□□□ 0.93
COLCA2-202ENST00000526216 PPP1R15AO75807 674 aaPredicted RBP20.81■□□□□ 0.92
COLCA2-202ENST00000526216 C3P01024 1663 aa20.81■□□□□ 0.92
COLCA2-202ENST00000526216 NEURL4Q96JN8 1562 aa20.8■□□□□ 0.92
COLCA2-202ENST00000526216 ADGRB3O60242 1522 aa20.8■□□□□ 0.92
COLCA2-202ENST00000526216 RIMS1Q86UR5 1692 aaKnown RBP20.79■□□□□ 0.92
COLCA2-202ENST00000526216 KIF1BO60333 1816 aa20.78■□□□□ 0.92
COLCA2-202ENST00000526216 ESF1Q9H501 851 aaKnown RBP20.78■□□□□ 0.92
COLCA2-202ENST00000526216 IFT172Q9UG01 1749 aa20.73■□□□□ 0.91
COLCA2-202ENST00000526216 CEBPAP49715 358 aaPredicted RBP20.73■□□□□ 0.91
COLCA2-202ENST00000526216 IDI1Q13907 227 aa20.73■□□□□ 0.91
COLCA2-202ENST00000526216 RGL3Q3MIN7 710 aa20.73■□□□□ 0.91
COLCA2-202ENST00000526216 TMEM131LA2VDJ0 1609 aa20.72■□□□□ 0.91
COLCA2-202ENST00000526216 NBPF8Q3BBV2 869 aa20.72■□□□□ 0.91
COLCA2-202ENST00000526216 UHRF1BP1Q6BDS2 1440 aa20.71■□□□□ 0.91
COLCA2-202ENST00000526216 TNRQ92752 1358 aa20.7■□□□□ 0.9
COLCA2-202ENST00000526216 MYO5BQ9ULV0 1848 aa20.7■□□□□ 0.9
COLCA2-202ENST00000526216 SLC52A1Q9NWF4 448 aa20.7■□□□□ 0.9
COLCA2-202ENST00000526216 DCAF11Q8TEB1 546 aa20.68■□□□□ 0.9
COLCA2-202ENST00000526216 PPLO60437 1756 aa20.67■□□□□ 0.9
COLCA2-202ENST00000526216 PRAG1Q86YV5 1406 aa20.65■□□□□ 0.9
COLCA2-202ENST00000526216 NEXMIFQ5QGS0 1516 aa20.65■□□□□ 0.9
COLCA2-202ENST00000526216 CHGAP10645 457 aaKnown RBP20.65■□□□□ 0.9
COLCA2-202ENST00000526216 KDM2AQ9Y2K7 1162 aa20.65■□□□□ 0.9
COLCA2-202ENST00000526216 A2ML1A8K2U0 1454 aa20.64■□□□□ 0.89
COLCA2-202ENST00000526216 MYOM2P54296 1465 aa20.64■□□□□ 0.89
COLCA2-202ENST00000526216 MYO3AQ8NEV4 1616 aa20.63■□□□□ 0.89
COLCA2-202ENST00000526216 PLPPR3Q6T4P5 718 aa20.62■□□□□ 0.89
COLCA2-202ENST00000526216 PTPRMP28827 1452 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms