RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 NCOA1Q15788 1441 aa34.44■■■■□ 3.1
CKLF-206ENST00000526149 ANKRD30AQ9BXX3 1397 aa34.43■■■■□ 3.1
CKLF-206ENST00000526149 ADGRL2O95490 1459 aa34.42■■■■□ 3.1
CKLF-206ENST00000526149 EIF2AK4Q9P2K8 1649 aaKnown RBP34.41■■■■□ 3.1
CKLF-206ENST00000526149 RNF17Q9BXT8 1623 aaKnown RBP34.39■■■■□ 3.1
CKLF-206ENST00000526149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.38■■■■□ 3.09
CKLF-206ENST00000526149 ERBINQ96RT1 1412 aa34.38■■■■□ 3.09
CKLF-206ENST00000526149 MROH1Q8NDA8 1641 aa34.35■■■■□ 3.09
CKLF-206ENST00000526149 KDM5DQ9BY66 1539 aa34.35■■■■□ 3.09
CKLF-206ENST00000526149 WASHC2CQ9Y4E1 1318 aa34.34■■■■□ 3.09
CKLF-206ENST00000526149 FAM135AQ9P2D6 1515 aa34.34■■■■□ 3.09
CKLF-206ENST00000526149 RRBP1Q9P2E9 1410 aaKnown RBP34.33■■■■□ 3.09
CKLF-206ENST00000526149 HSPA2P54652 639 aa34.33■■■■□ 3.09
CKLF-206ENST00000526149 NPATQ14207 1427 aa34.32■■■■□ 3.08
CKLF-206ENST00000526149 PREX1Q8TCU6 1659 aa34.31■■■■□ 3.08
CKLF-206ENST00000526149 SETD1BQ9UPS6 1966 aaKnown RBP34.31■■■■□ 3.08
CKLF-206ENST00000526149 ITGAEP38570 1179 aa34.27■■■■□ 3.08
CKLF-206ENST00000526149 UHRF1BP1Q6BDS2 1440 aa34.27■■■■□ 3.08
CKLF-206ENST00000526149 ABCC3O15438 1527 aa34.26■■■■□ 3.08
CKLF-206ENST00000526149 FBXO31Q5XUX0 539 aaPredicted RBP34.24■■■■□ 3.07
CKLF-206ENST00000526149 ROCK1Q13464 1354 aa34.23■■■■□ 3.07
CKLF-206ENST00000526149 PZPP20742 1482 aa34.22■■■■□ 3.07
CKLF-206ENST00000526149 PRDM15P57071 1507 aaPredicted RBP34.22■■■■□ 3.07
CKLF-206ENST00000526149 DEPDC5O75140 1603 aa34.21■■■■□ 3.07
CKLF-206ENST00000526149 ANKRD50Q9ULJ7 1429 aa34.21■■■■□ 3.07
CKLF-206ENST00000526149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.19■■■■□ 3.06
CKLF-206ENST00000526149 ZC3H13Q5T200 1668 aaKnown RBP34.19■■■■□ 3.06
CKLF-206ENST00000526149 CEP152O94986 1710 aa34.15■■■■□ 3.06
CKLF-206ENST00000526149 VWDEQ8N2E2 1590 aa34.12■■■■□ 3.05
CKLF-206ENST00000526149 MYO3AQ8NEV4 1616 aa34.11■■■■□ 3.05
CKLF-206ENST00000526149 TNRQ92752 1358 aa34.11■■■■□ 3.05
CKLF-206ENST00000526149 CAMSAP1Q5T5Y3 1602 aa34.1■■■■□ 3.05
CKLF-206ENST00000526149 KANK1Q14678 1352 aa34.09■■■■□ 3.05
CKLF-206ENST00000526149 LMTK2Q8IWU2 1503 aa34.07■■■■□ 3.04
CKLF-206ENST00000526149 ARHGAP31Q2M1Z3 1444 aa34.06■■■■□ 3.04
CKLF-206ENST00000526149 ZNF142P52746 1687 aaPredicted RBP34.03■■■■□ 3.04
CKLF-206ENST00000526149 SPATA31D1Q6ZQQ2 1576 aa34.03■■■■□ 3.04
CKLF-206ENST00000526149 CEP170BQ9Y4F5 1589 aaPredicted RBP34.03■■■■□ 3.04
CKLF-206ENST00000526149 ERVK-7P63135 1459 aa34.03■■■■□ 3.04
CKLF-206ENST00000526149 A2ML1A8K2U0 1454 aa34.01■■■■□ 3.04
CKLF-206ENST00000526149 STRCQ7RTU9 1775 aa34■■■■□ 3.03
CKLF-206ENST00000526149 UNC13BO14795 1591 aa33.98■■■■□ 3.03
CKLF-206ENST00000526149 NAIPQ13075 1403 aa33.95■■■■□ 3.02
CKLF-206ENST00000526149 NLRP1Q9C000 1473 aa33.95■■■■□ 3.02
CKLF-206ENST00000526149 EFCAB6Q5THR3 1501 aa33.93■■■■□ 3.02
CKLF-206ENST00000526149 CFAP65Q6ZU64 1925 aaKnown RBP33.92■■■■□ 3.02
CKLF-206ENST00000526149 PLA2R1Q13018 1463 aa33.88■■■■□ 3.01
CKLF-206ENST00000526149 NCKAP5LQ9HCH0 1330 aa33.87■■■■□ 3.01
CKLF-206ENST00000526149 HFM1A2PYH4 1435 aa33.87■■■■□ 3.01
CKLF-206ENST00000526149 NUP155O75694 1391 aa33.86■■■■□ 3.01
CKLF-206ENST00000526149 TET3O43151 1660 aa33.85■■■■□ 3.01
CKLF-206ENST00000526149 DMRT2Q9Y5R5 561 aa33.85■■■■□ 3.01
CKLF-206ENST00000526149 NOS1P29475 1434 aa33.85■■■■□ 3.01
CKLF-206ENST00000526149 GCC2Q8IWJ2 1684 aa33.84■■■■□ 3.01
CKLF-206ENST00000526149 IQGAP3Q86VI3 1631 aa33.84■■■■□ 3.01
CKLF-206ENST00000526149 UGGT1Q9NYU2 1555 aa33.84■■■■□ 3.01
CKLF-206ENST00000526149 PTPRTO14522 1441 aa33.83■■■■□ 3.01
CKLF-206ENST00000526149 THEMISQ8N1K5 641 aaPredicted RBP33.81■■■■□ 3
CKLF-206ENST00000526149 RPRD2Q5VT52 1461 aaKnown RBP33.81■■■■□ 3
CKLF-206ENST00000526149 PKD2Q13563 968 aa33.8■■■■□ 3
CKLF-206ENST00000526149 SYNMO15061 1565 aa33.8■■■■□ 3
CKLF-206ENST00000526149 IDI1Q13907 227 aa33.77■■■■□ 3
CKLF-206ENST00000526149 E9PCH4 1651 aa33.74■■■□□ 2.99
CKLF-206ENST00000526149 UBR1Q8IWV7 1749 aa33.73■■■□□ 2.99
CKLF-206ENST00000526149 PIK3C2BO00750 1634 aa33.71■■■□□ 2.99
CKLF-206ENST00000526149 ANKLE2Q86XL3 938 aa33.69■■■□□ 2.98
CKLF-206ENST00000526149 NEURL4Q96JN8 1562 aa33.68■■■□□ 2.98
CKLF-206ENST00000526149 SLC52A1Q9NWF4 448 aa33.68■■■□□ 2.98
CKLF-206ENST00000526149 POLR1AO95602 1720 aaPredicted RBP33.64■■■□□ 2.98
CKLF-206ENST00000526149 ARHGAP23Q9P227 1491 aa33.63■■■□□ 2.97
CKLF-206ENST00000526149 TRIM52Q96A61 297 aa33.63■■■□□ 2.97
CKLF-206ENST00000526149 SLIT1O75093 1534 aa33.61■■■□□ 2.97
CKLF-206ENST00000526149 MED14O60244 1454 aa33.61■■■□□ 2.97
CKLF-206ENST00000526149 LTKP29376 864 aa33.6■■■□□ 2.97
CKLF-206ENST00000526149 STAG3Q9UJ98 1225 aa33.6■■■□□ 2.97
CKLF-206ENST00000526149 KDM5AP29375 1690 aaKnown RBP33.59■■■□□ 2.97
CKLF-206ENST00000526149 TMEM2Q9UHN6 1383 aa33.58■■■□□ 2.97
CKLF-206ENST00000526149 ADGRB3O60242 1522 aa33.58■■■□□ 2.97
CKLF-206ENST00000526149 NPHP4O75161 1426 aaPredicted RBP33.57■■■□□ 2.96
CKLF-206ENST00000526149 SETD5Q9C0A6 1442 aa33.54■■■□□ 2.96
CKLF-206ENST00000526149 LTBP4Q8N2S1 1624 aa33.54■■■□□ 2.96
CKLF-206ENST00000526149 TXNDC2Q86VQ3 553 aa33.54■■■□□ 2.96
CKLF-206ENST00000526149 CERKQ8TCT0 537 aa33.54■■■□□ 2.96
CKLF-206ENST00000526149 ZNF335Q9H4Z2 1342 aaPredicted RBP33.53■■■□□ 2.96
CKLF-206ENST00000526149 SCAF11Q99590 1463 aaKnown RBP33.53■■■□□ 2.96
CKLF-206ENST00000526149 SLC4A1APQ9BWU0 796 aaKnown RBP33.51■■■□□ 2.95
CKLF-206ENST00000526149 TMEM131LA2VDJ0 1609 aa33.5■■■□□ 2.95
CKLF-206ENST00000526149 EID1Q9Y6B2 187 aa33.48■■■□□ 2.95
CKLF-206ENST00000526149 SPHKAPQ2M3C7 1700 aa33.48■■■□□ 2.95
CKLF-206ENST00000526149 IQGAP1P46940 1657 aa33.47■■■□□ 2.95
CKLF-206ENST00000526149 CHGAP10645 457 aaKnown RBP33.45■■■□□ 2.95
CKLF-206ENST00000526149 MYO5BQ9ULV0 1848 aa33.44■■■□□ 2.94
CKLF-206ENST00000526149 ILDR1Q86SU0 546 aaPredicted RBP33.44■■■□□ 2.94
CKLF-206ENST00000526149 RAB3GAP2Q9H2M9 1393 aa33.44■■■□□ 2.94
CKLF-206ENST00000526149 ZFYVE9O95405 1425 aa33.43■■■□□ 2.94
CKLF-206ENST00000526149 MPHOSPH9Q99550 1183 aa33.42■■■□□ 2.94
CKLF-206ENST00000526149 TRPM2O94759 1503 aa33.41■■■□□ 2.94
CKLF-206ENST00000526149 FOXD1Q16676 465 aa33.4■■■□□ 2.94
CKLF-206ENST00000526149 RIMS2Q9UQ26 1411 aa33.39■■■□□ 2.94
CKLF-206ENST00000526149 CLTCL1P53675 1640 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms