RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 EIF2AK4Q9P2K8 1649 aaKnown RBP18.97■□□□□ 0.63
SSBP3-210ENST00000525990 TSPY4P0CV99 314 aa18.97■□□□□ 0.63
SSBP3-210ENST00000525990 TSPY10P0CW01 314 aa18.97■□□□□ 0.63
SSBP3-210ENST00000525990 FBXO41Q8TF61 875 aa18.97■□□□□ 0.63
SSBP3-210ENST00000525990 DNMT1P26358 1616 aaKnown RBP18.96■□□□□ 0.63
SSBP3-210ENST00000525990 APLP2Q06481 763 aa18.95■□□□□ 0.62
SSBP3-210ENST00000525990 FGD6Q6ZV73 1430 aa18.94■□□□□ 0.62
SSBP3-210ENST00000525990 CFAP65Q6ZU64 1925 aaKnown RBP18.94■□□□□ 0.62
SSBP3-210ENST00000525990 ABCC5O15440 1437 aa18.93■□□□□ 0.62
SSBP3-210ENST00000525990 ZC3H13Q5T200 1668 aaKnown RBP18.93■□□□□ 0.62
SSBP3-210ENST00000525990 FBXO31Q5XUX0 539 aaPredicted RBP18.93■□□□□ 0.62
SSBP3-210ENST00000525990 FAM135AQ9P2D6 1515 aa18.93■□□□□ 0.62
SSBP3-210ENST00000525990 PZPP20742 1482 aa18.92■□□□□ 0.62
SSBP3-210ENST00000525990 TCOF1Q13428 1488 aaKnown RBP18.92■□□□□ 0.62
SSBP3-210ENST00000525990 ABCC3O15438 1527 aa18.92■□□□□ 0.62
SSBP3-210ENST00000525990 PPP6R1Q9UPN7 881 aa18.92■□□□□ 0.62
SSBP3-210ENST00000525990 PTPRTO14522 1441 aa18.91■□□□□ 0.62
SSBP3-210ENST00000525990 CERKQ8TCT0 537 aa18.91■□□□□ 0.62
SSBP3-210ENST00000525990 DAPK1P53355 1430 aa18.91■□□□□ 0.62
SSBP3-210ENST00000525990 SHANK2Q9UPX8 1470 aa18.9■□□□□ 0.62
SSBP3-210ENST00000525990 DUOX2Q9NRD8 1548 aa18.9■□□□□ 0.62
SSBP3-210ENST00000525990 POLR1AO95602 1720 aaPredicted RBP18.9■□□□□ 0.62
SSBP3-210ENST00000525990 WASHC2CQ9Y4E1 1318 aa18.9■□□□□ 0.62
SSBP3-210ENST00000525990 NCKAP5LQ9HCH0 1330 aa18.89■□□□□ 0.61
SSBP3-210ENST00000525990 A2ML1A8K2U0 1454 aa18.89■□□□□ 0.61
SSBP3-210ENST00000525990 LTBP4Q8N2S1 1624 aa18.89■□□□□ 0.61
SSBP3-210ENST00000525990 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
SSBP3-210ENST00000525990 TNRQ92752 1358 aa18.87■□□□□ 0.61
SSBP3-210ENST00000525990 PLA2R1Q13018 1463 aa18.86■□□□□ 0.61
SSBP3-210ENST00000525990 KIF15Q9NS87 1388 aa18.86■□□□□ 0.61
SSBP3-210ENST00000525990 DEPDC5O75140 1603 aa18.85■□□□□ 0.61
SSBP3-210ENST00000525990 PRDM15P57071 1507 aaPredicted RBP18.85■□□□□ 0.61
SSBP3-210ENST00000525990 NEURL4Q96JN8 1562 aa18.85■□□□□ 0.61
SSBP3-210ENST00000525990 RRP7BPQ9NSQ0 103 aa18.84■□□□□ 0.61
SSBP3-210ENST00000525990 SPATA31D1Q6ZQQ2 1576 aa18.84■□□□□ 0.61
SSBP3-210ENST00000525990 CHIC2Q9UKJ5 165 aa18.82■□□□□ 0.6
SSBP3-210ENST00000525990 ERVK-7P63135 1459 aa18.81■□□□□ 0.6
SSBP3-210ENST00000525990 ERBINQ96RT1 1412 aa18.81■□□□□ 0.6
SSBP3-210ENST00000525990 UGGT1Q9NYU2 1555 aa18.79■□□□□ 0.6
SSBP3-210ENST00000525990 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
SSBP3-210ENST00000525990 UBR1Q8IWV7 1749 aa18.78■□□□□ 0.6
SSBP3-210ENST00000525990 NLRP1Q9C000 1473 aa18.77■□□□□ 0.6
SSBP3-210ENST00000525990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.77■□□□□ 0.62e-6■■□□□ 13.6
SSBP3-210ENST00000525990 PKD2Q13563 968 aa18.76■□□□□ 0.59
SSBP3-210ENST00000525990 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
SSBP3-210ENST00000525990 ADGRL2O95490 1459 aa18.76■□□□□ 0.59
SSBP3-210ENST00000525990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.59
SSBP3-210ENST00000525990 ANKRD30AQ9BXX3 1397 aa18.75■□□□□ 0.59
SSBP3-210ENST00000525990 VWDEQ8N2E2 1590 aa18.75■□□□□ 0.59
SSBP3-210ENST00000525990 PPARGC1BQ86YN6 1023 aaKnown RBP18.74■□□□□ 0.59
SSBP3-210ENST00000525990 PIK3C2BO00750 1634 aa18.72■□□□□ 0.59
SSBP3-210ENST00000525990 IQGAP1P46940 1657 aa18.71■□□□□ 0.59
SSBP3-210ENST00000525990 STRCP1A6NGW2 1772 aa18.7■□□□□ 0.58
SSBP3-210ENST00000525990 SYNMO15061 1565 aa18.69■□□□□ 0.58
SSBP3-210ENST00000525990 ARHGAP31Q2M1Z3 1444 aa18.69■□□□□ 0.58
SSBP3-210ENST00000525990 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
SSBP3-210ENST00000525990 LMTK2Q8IWU2 1503 aa18.69■□□□□ 0.58
SSBP3-210ENST00000525990 IQSEC2Q5JU85 1478 aa18.68■□□□□ 0.58
SSBP3-210ENST00000525990 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
SSBP3-210ENST00000525990 MED14O60244 1454 aa18.66■□□□□ 0.58
SSBP3-210ENST00000525990 KANK1Q14678 1352 aa18.66■□□□□ 0.58
SSBP3-210ENST00000525990 NPHP4O75161 1426 aaPredicted RBP18.66■□□□□ 0.58
SSBP3-210ENST00000525990 UNC13BO14795 1591 aa18.65■□□□□ 0.58
SSBP3-210ENST00000525990 MYO5BQ9ULV0 1848 aa18.65■□□□□ 0.58
SSBP3-210ENST00000525990 ANKRD50Q9ULJ7 1429 aa18.65■□□□□ 0.58
SSBP3-210ENST00000525990 ANKLE2Q86XL3 938 aa18.64■□□□□ 0.57
SSBP3-210ENST00000525990 GCC2Q8IWJ2 1684 aa18.63■□□□□ 0.57
SSBP3-210ENST00000525990 TET3O43151 1660 aa18.63■□□□□ 0.57
SSBP3-210ENST00000525990 SLIT1O75093 1534 aa18.61■□□□□ 0.57
SSBP3-210ENST00000525990 ARHGAP23Q9P227 1491 aa18.61■□□□□ 0.57
SSBP3-210ENST00000525990 KDM5AP29375 1690 aaKnown RBP18.6■□□□□ 0.57
SSBP3-210ENST00000525990 E9PCH4 1651 aa18.6■□□□□ 0.57
SSBP3-210ENST00000525990 SCAF11Q99590 1463 aaKnown RBP18.59■□□□□ 0.57
SSBP3-210ENST00000525990 ITGAEP38570 1179 aa18.59■□□□□ 0.57
SSBP3-210ENST00000525990 CPS1P31327 1500 aa18.59■□□□□ 0.57
SSBP3-210ENST00000525990 NOS1P29475 1434 aa18.58■□□□□ 0.57
SSBP3-210ENST00000525990 LTKP29376 864 aa18.58■□□□□ 0.56
SSBP3-210ENST00000525990 IQGAP3Q86VI3 1631 aa18.57■□□□□ 0.56
SSBP3-210ENST00000525990 XIRP1Q702N8 1843 aaKnown RBP18.56■□□□□ 0.56
SSBP3-210ENST00000525990 ADGRB3O60242 1522 aa18.56■□□□□ 0.56
SSBP3-210ENST00000525990 UBAP1LF5GYI3 381 aa18.55■□□□□ 0.56
SSBP3-210ENST00000525990 IDI1Q13907 227 aa18.55■□□□□ 0.56
SSBP3-210ENST00000525990 ALKQ9UM73 1620 aa18.55■□□□□ 0.56
SSBP3-210ENST00000525990 ROCK1Q13464 1354 aa18.55■□□□□ 0.56
SSBP3-210ENST00000525990 TMEM2Q9UHN6 1383 aa18.53■□□□□ 0.56
SSBP3-210ENST00000525990 RPRD2Q5VT52 1461 aaKnown RBP18.52■□□□□ 0.56
SSBP3-210ENST00000525990 TXNDC2Q86VQ3 553 aa18.52■□□□□ 0.56
SSBP3-210ENST00000525990 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
SSBP3-210ENST00000525990 LRRC7Q96NW7 1537 aa18.5■□□□□ 0.55
SSBP3-210ENST00000525990 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
SSBP3-210ENST00000525990 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
SSBP3-210ENST00000525990 SENP3Q9H4L4 574 aaPredicted RBP18.47■□□□□ 0.55
SSBP3-210ENST00000525990 SPHKAPQ2M3C7 1700 aa18.46■□□□□ 0.55
SSBP3-210ENST00000525990 PIP4K2BP78356 416 aa18.45■□□□□ 0.54
SSBP3-210ENST00000525990 EID1Q9Y6B2 187 aa18.45■□□□□ 0.54
SSBP3-210ENST00000525990 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
SSBP3-210ENST00000525990 NUP155O75694 1391 aa18.44■□□□□ 0.54
SSBP3-210ENST00000525990 ZFYVE9O95405 1425 aa18.43■□□□□ 0.54
SSBP3-210ENST00000525990 SLC52A1Q9NWF4 448 aa18.42■□□□□ 0.54
SSBP3-210ENST00000525990 SLC26A8Q96RN1 970 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms