RNA–Protein interactions for RNA: ENST00000525933.1

RPS3-205, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-205ENST00000525933 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
RPS3-205ENST00000525933 CCDC18Q5T9S5 1454 aa17.2■□□□□ 0.34
RPS3-205ENST00000525933 GPATCH8Q9UKJ3 1502 aaKnown RBP17.18■□□□□ 0.34
RPS3-205ENST00000525933 CASKIN1Q8WXD9 1431 aa17.17■□□□□ 0.34
RPS3-205ENST00000525933 FBXO31Q5XUX0 539 aaPredicted RBP17.17■□□□□ 0.34
RPS3-205ENST00000525933 RGS17Q9UGC6 210 aaPredicted RBP17.16■□□□□ 0.34
RPS3-205ENST00000525933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.33
RPS3-205ENST00000525933 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
RPS3-205ENST00000525933 TNRQ92752 1358 aa17.13■□□□□ 0.33
RPS3-205ENST00000525933 IQGAP1P46940 1657 aa17.11■□□□□ 0.33
RPS3-205ENST00000525933 ANKLE2Q86XL3 938 aa17.11■□□□□ 0.33
RPS3-205ENST00000525933 DEPDC5O75140 1603 aa17.11■□□□□ 0.33
RPS3-205ENST00000525933 NPHP4O75161 1426 aaPredicted RBP17.11■□□□□ 0.33
RPS3-205ENST00000525933 PLEKHH2Q8IVE3 1493 aa17.1■□□□□ 0.33
RPS3-205ENST00000525933 LRRC7Q96NW7 1537 aa17.1■□□□□ 0.33
RPS3-205ENST00000525933 RNF17Q9BXT8 1623 aaKnown RBP17.09■□□□□ 0.33
RPS3-205ENST00000525933 MED14O60244 1454 aa17.09■□□□□ 0.33
RPS3-205ENST00000525933 CFDP1Q9UEE9 299 aaPredicted RBP17.09■□□□□ 0.33
RPS3-205ENST00000525933 PZPP20742 1482 aa17.08■□□□□ 0.32
RPS3-205ENST00000525933 XIRP1Q702N8 1843 aaKnown RBP17.08■□□□□ 0.32
RPS3-205ENST00000525933 UGGT1Q9NYU2 1555 aa17.08■□□□□ 0.32
RPS3-205ENST00000525933 ZNF644Q9H582 1327 aaPredicted RBP17.07■□□□□ 0.32
RPS3-205ENST00000525933 THEMISQ8N1K5 641 aaPredicted RBP17.06■□□□□ 0.32
RPS3-205ENST00000525933 FYCO1Q9BQS8 1478 aa17.06■□□□□ 0.32
RPS3-205ENST00000525933 SYNMO15061 1565 aa17.05■□□□□ 0.32
RPS3-205ENST00000525933 KDM5DQ9BY66 1539 aa17.05■□□□□ 0.32
RPS3-205ENST00000525933 DHX29Q7Z478 1369 aaKnown RBP17.04■□□□□ 0.32
RPS3-205ENST00000525933 CCNB3Q8WWL7 1395 aa17.04■□□□□ 0.32
RPS3-205ENST00000525933 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
RPS3-205ENST00000525933 ZC3H13Q5T200 1668 aaKnown RBP17.04■□□□□ 0.32
RPS3-205ENST00000525933 KIF3BO15066 747 aa17.03■□□□□ 0.32
RPS3-205ENST00000525933 CFAP65Q6ZU64 1925 aaKnown RBP17.03■□□□□ 0.32
RPS3-205ENST00000525933 SETD1AO15047 1707 aaKnown RBP17.03■□□□□ 0.32
RPS3-205ENST00000525933 MBD5Q9P267 1494 aa17.03■□□□□ 0.32
RPS3-205ENST00000525933 FAM135AQ9P2D6 1515 aa17.02■□□□□ 0.32
RPS3-205ENST00000525933 POTEAQ6S8J7 498 aa17.02■□□□□ 0.32
RPS3-205ENST00000525933 NLRP1Q9C000 1473 aa17.02■□□□□ 0.31
RPS3-205ENST00000525933 TIAM1Q13009 1591 aa17.01■□□□□ 0.31
RPS3-205ENST00000525933 RTEL1-TNFRSF6BF6WH68 1400 aa17■□□□□ 0.31
RPS3-205ENST00000525933 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
RPS3-205ENST00000525933 UBR1Q8IWV7 1749 aa16.96■□□□□ 0.3
RPS3-205ENST00000525933 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
RPS3-205ENST00000525933 CEP152O94986 1710 aa16.91■□□□□ 0.3
RPS3-205ENST00000525933 CCDC141Q6ZP82 1450 aa16.9■□□□□ 0.3
RPS3-205ENST00000525933 ROBO1Q9Y6N7 1651 aa16.9■□□□□ 0.3
RPS3-205ENST00000525933 ERVK-7P63135 1459 aa16.89■□□□□ 0.29
RPS3-205ENST00000525933 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
RPS3-205ENST00000525933 ABCC3O15438 1527 aa16.88■□□□□ 0.29
RPS3-205ENST00000525933 LTKP29376 864 aa16.88■□□□□ 0.29
RPS3-205ENST00000525933 NCOA2Q15596 1464 aa16.88■□□□□ 0.29
RPS3-205ENST00000525933 SCAF11Q99590 1463 aaKnown RBP16.88■□□□□ 0.29
RPS3-205ENST00000525933 EHBP1L1Q8N3D4 1523 aa16.86■□□□□ 0.29
RPS3-205ENST00000525933 CAMSAP2Q08AD1 1489 aa16.86■□□□□ 0.29
RPS3-205ENST00000525933 ARHGAP23Q9P227 1491 aa16.84■□□□□ 0.29
RPS3-205ENST00000525933 TXNDC2Q86VQ3 553 aa16.84■□□□□ 0.29
RPS3-205ENST00000525933 MROH1Q8NDA8 1641 aa16.84■□□□□ 0.29
RPS3-205ENST00000525933 SLIT1O75093 1534 aa16.83■□□□□ 0.28
RPS3-205ENST00000525933 PHLPP1O60346 1717 aa16.83■□□□□ 0.28
RPS3-205ENST00000525933 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
RPS3-205ENST00000525933 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
RPS3-205ENST00000525933 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
RPS3-205ENST00000525933 TMEM94Q12767 1356 aa16.8■□□□□ 0.28
RPS3-205ENST00000525933 MAP3K1Q13233 1512 aa16.8■□□□□ 0.28
RPS3-205ENST00000525933 RSPH4AQ5TD94 716 aa16.79■□□□□ 0.28
RPS3-205ENST00000525933 UPF1Q92900 1129 aaKnown RBP eCLIP16.79■□□□□ 0.28
RPS3-205ENST00000525933 PIK3C2BO00750 1634 aa16.79■□□□□ 0.28
RPS3-205ENST00000525933 EIF2AK4Q9P2K8 1649 aaKnown RBP16.79■□□□□ 0.28
RPS3-205ENST00000525933 TSPY4P0CV99 314 aa16.76■□□□□ 0.27
RPS3-205ENST00000525933 TSPY10P0CW01 314 aa16.76■□□□□ 0.27
RPS3-205ENST00000525933 MAST1Q9Y2H9 1570 aa16.76■□□□□ 0.27
RPS3-205ENST00000525933 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
RPS3-205ENST00000525933 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
RPS3-205ENST00000525933 TET3O43151 1660 aa16.73■□□□□ 0.27
RPS3-205ENST00000525933 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
RPS3-205ENST00000525933 KCNA6P17658 529 aa16.72■□□□□ 0.27
RPS3-205ENST00000525933 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
RPS3-205ENST00000525933 LRP6O75581 1613 aa16.72■□□□□ 0.27
RPS3-205ENST00000525933 COL16A1Q07092 1604 aaPredicted RBP16.72■□□□□ 0.27
RPS3-205ENST00000525933 JCADQ9P266 1359 aa16.72■□□□□ 0.27
RPS3-205ENST00000525933 TMEM2Q9UHN6 1383 aa16.72■□□□□ 0.27
RPS3-205ENST00000525933 SLC26A8Q96RN1 970 aa16.71■□□□□ 0.27
RPS3-205ENST00000525933 PRDM15P57071 1507 aaPredicted RBP16.71■□□□□ 0.27
RPS3-205ENST00000525933 NWD1Q149M9 1564 aa16.69■□□□□ 0.26
RPS3-205ENST00000525933 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
RPS3-205ENST00000525933 ARHGAP31Q2M1Z3 1444 aa16.68■□□□□ 0.26
RPS3-205ENST00000525933 SLAIN2Q9P270 581 aa16.68■□□□□ 0.26
RPS3-205ENST00000525933 CHD2O14647 1828 aaKnown RBP16.67■□□□□ 0.26
RPS3-205ENST00000525933 EFCAB6Q5THR3 1501 aa16.67■□□□□ 0.26
RPS3-205ENST00000525933 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
RPS3-205ENST00000525933 MSH6P52701 1360 aa16.66■□□□□ 0.26
RPS3-205ENST00000525933 MAPK8IP2Q13387 824 aaPredicted RBP16.66■□□□□ 0.26
RPS3-205ENST00000525933 DUOX2Q9NRD8 1548 aa16.65■□□□□ 0.26
RPS3-205ENST00000525933 NKTRP30414 1462 aaKnown RBP16.65■□□□□ 0.26
RPS3-205ENST00000525933 POTEDQ86YR6 584 aa16.65■□□□□ 0.26
RPS3-205ENST00000525933 SHPRHQ149N8 1683 aa16.64■□□□□ 0.25
RPS3-205ENST00000525933 SRCAPQ6ZRS2 3230 aa16.64■□□□□ 0.25
RPS3-205ENST00000525933 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
RPS3-205ENST00000525933 MEX3CQ5U5Q3 659 aaKnown RBP16.64■□□□□ 0.25
RPS3-205ENST00000525933 ZNF772Q68DY9 489 aaPredicted RBP16.64■□□□□ 0.25
RPS3-205ENST00000525933 IDI1Q13907 227 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms