RNA–Protein interactions for RNA: ENST00000525801.1

ROM1-202, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 3

Gene ROM1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-202ENST00000525801 CEP170BQ9Y4F5 1589 aaPredicted RBP23.14■■□□□ 1.29
ROM1-202ENST00000525801 TNRQ92752 1358 aa23.12■■□□□ 1.29
ROM1-202ENST00000525801 KANK4Q5T7N3 995 aaPredicted RBP23.11■■□□□ 1.29
ROM1-202ENST00000525801 RSPH4AQ5TD94 716 aa23.1■■□□□ 1.29
ROM1-202ENST00000525801 PIP4K2BP78356 416 aa23.08■■□□□ 1.29
ROM1-202ENST00000525801 A2ML1A8K2U0 1454 aa23.07■■□□□ 1.28
ROM1-202ENST00000525801 PLA2R1Q13018 1463 aa23.06■■□□□ 1.28
ROM1-202ENST00000525801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.06■■□□□ 1.28
ROM1-202ENST00000525801 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
ROM1-202ENST00000525801 TCOF1Q13428 1488 aaKnown RBP23.05■■□□□ 1.28
ROM1-202ENST00000525801 VPS8Q8N3P4 1428 aa23.04■■□□□ 1.28
ROM1-202ENST00000525801 ANKLE2Q86XL3 938 aa23.03■■□□□ 1.28
ROM1-202ENST00000525801 LRRC9Q6ZRR7 1453 aa23.03■■□□□ 1.28
ROM1-202ENST00000525801 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
ROM1-202ENST00000525801 KDM5DQ9BY66 1539 aa23.02■■□□□ 1.28
ROM1-202ENST00000525801 DNMT1P26358 1616 aaKnown RBP23.01■■□□□ 1.27
ROM1-202ENST00000525801 THEMISQ8N1K5 641 aaPredicted RBP23.01■■□□□ 1.27
ROM1-202ENST00000525801 PZPP20742 1482 aa22.99■■□□□ 1.27
ROM1-202ENST00000525801 IQSEC2Q5JU85 1478 aa22.99■■□□□ 1.27
ROM1-202ENST00000525801 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
ROM1-202ENST00000525801 APLP2Q06481 763 aa22.98■■□□□ 1.27
ROM1-202ENST00000525801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.98■■□□□ 1.27
ROM1-202ENST00000525801 SPATA31D1Q6ZQQ2 1576 aa22.97■■□□□ 1.27
ROM1-202ENST00000525801 RRP7BPQ9NSQ0 103 aa22.96■■□□□ 1.27
ROM1-202ENST00000525801 SOCS7O14512 581 aa22.95■■□□□ 1.26
ROM1-202ENST00000525801 ARHGEF5Q12774 1597 aa22.94■■□□□ 1.26
ROM1-202ENST00000525801 TOM1O60784 492 aa22.92■■□□□ 1.26
ROM1-202ENST00000525801 HSPA1LP34931 641 aa22.92■■□□□ 1.26
ROM1-202ENST00000525801 FAM135AQ9P2D6 1515 aa22.92■■□□□ 1.26
ROM1-202ENST00000525801 CHIC2Q9UKJ5 165 aa22.91■■□□□ 1.26
ROM1-202ENST00000525801 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
ROM1-202ENST00000525801 SHANK2Q9UPX8 1470 aa22.91■■□□□ 1.26
ROM1-202ENST00000525801 MYOM3Q5VTT5 1437 aa22.91■■□□□ 1.26
ROM1-202ENST00000525801 NPHP4O75161 1426 aaPredicted RBP22.9■■□□□ 1.26
ROM1-202ENST00000525801 NLRP1Q9C000 1473 aa22.88■■□□□ 1.25
ROM1-202ENST00000525801 NEURL4Q96JN8 1562 aa22.88■■□□□ 1.25
ROM1-202ENST00000525801 ABCC3O15438 1527 aa22.87■■□□□ 1.25
ROM1-202ENST00000525801 POLR1AO95602 1720 aaPredicted RBP22.84■■□□□ 1.25
ROM1-202ENST00000525801 KIF15Q9NS87 1388 aa22.84■■□□□ 1.25
ROM1-202ENST00000525801 STAG3Q9UJ98 1225 aa22.83■■□□□ 1.25
ROM1-202ENST00000525801 ERVK-7P63135 1459 aa22.82■■□□□ 1.24
ROM1-202ENST00000525801 CPS1P31327 1500 aa22.82■■□□□ 1.24
ROM1-202ENST00000525801 MAST1Q9Y2H9 1570 aa22.81■■□□□ 1.24
ROM1-202ENST00000525801 TXNDC2Q86VQ3 553 aa22.81■■□□□ 1.24
ROM1-202ENST00000525801 ABCC5O15440 1437 aa22.8■■□□□ 1.24
ROM1-202ENST00000525801 CFAP65Q6ZU64 1925 aaKnown RBP22.79■■□□□ 1.24
ROM1-202ENST00000525801 RNF17Q9BXT8 1623 aaKnown RBP22.79■■□□□ 1.24
ROM1-202ENST00000525801 DUOX2Q9NRD8 1548 aa22.78■■□□□ 1.24
ROM1-202ENST00000525801 LTKP29376 864 aa22.78■■□□□ 1.24
ROM1-202ENST00000525801 VWDEQ8N2E2 1590 aa22.78■■□□□ 1.24
ROM1-202ENST00000525801 MAP3K1Q13233 1512 aa22.77■■□□□ 1.24
ROM1-202ENST00000525801 CEP152O94986 1710 aa22.77■■□□□ 1.24
ROM1-202ENST00000525801 FAM50AQ14320 339 aaKnown RBP22.76■■□□□ 1.23
ROM1-202ENST00000525801 EID1Q9Y6B2 187 aa22.75■■□□□ 1.23
ROM1-202ENST00000525801 MROH1Q8NDA8 1641 aa22.75■■□□□ 1.23
ROM1-202ENST00000525801 MED14O60244 1454 aa22.74■■□□□ 1.23
ROM1-202ENST00000525801 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
ROM1-202ENST00000525801 KANK1Q14678 1352 aa22.74■■□□□ 1.23
ROM1-202ENST00000525801 PTPN23Q9H3S7 1636 aa22.73■■□□□ 1.23
ROM1-202ENST00000525801 EIF2AK4Q9P2K8 1649 aaKnown RBP22.73■■□□□ 1.23
ROM1-202ENST00000525801 BCANQ96GW7 911 aa22.73■■□□□ 1.23
ROM1-202ENST00000525801 DAPK1P53355 1430 aa22.73■■□□□ 1.23
ROM1-202ENST00000525801 IQGAP1P46940 1657 aa22.72■■□□□ 1.23
ROM1-202ENST00000525801 ZC3H13Q5T200 1668 aaKnown RBP22.72■■□□□ 1.23
ROM1-202ENST00000525801 DEPDC5O75140 1603 aa22.71■■□□□ 1.23
ROM1-202ENST00000525801 RBM33Q96EV2 1170 aaKnown RBP22.7■■□□□ 1.22
ROM1-202ENST00000525801 LRRC7Q96NW7 1537 aa22.69■■□□□ 1.22
ROM1-202ENST00000525801 SCAF11Q99590 1463 aaKnown RBP22.69■■□□□ 1.22
ROM1-202ENST00000525801 FGD6Q6ZV73 1430 aa22.69■■□□□ 1.22
ROM1-202ENST00000525801 ERBINQ96RT1 1412 aa22.68■■□□□ 1.22
ROM1-202ENST00000525801 ANKRD30AQ9BXX3 1397 aa22.68■■□□□ 1.22
ROM1-202ENST00000525801 IDI1Q13907 227 aa22.68■■□□□ 1.22
ROM1-202ENST00000525801 SLC26A8Q96RN1 970 aa22.67■■□□□ 1.22
ROM1-202ENST00000525801 UBR1Q8IWV7 1749 aa22.65■■□□□ 1.22
ROM1-202ENST00000525801 MED1Q15648 1581 aaPredicted RBP22.64■■□□□ 1.22
ROM1-202ENST00000525801 STRCP1A6NGW2 1772 aa22.64■■□□□ 1.22
ROM1-202ENST00000525801 ARHGAP31Q2M1Z3 1444 aa22.63■■□□□ 1.21
ROM1-202ENST00000525801 PRDM15P57071 1507 aaPredicted RBP22.62■■□□□ 1.21
ROM1-202ENST00000525801 TMEM2Q9UHN6 1383 aa22.62■■□□□ 1.21
ROM1-202ENST00000525801 CROCC2H7BZ55 1655 aa22.62■■□□□ 1.21
ROM1-202ENST00000525801 ALKQ9UM73 1620 aa22.6■■□□□ 1.21
ROM1-202ENST00000525801 CHGAP10645 457 aaKnown RBP22.6■■□□□ 1.21
ROM1-202ENST00000525801 PPARGC1BQ86YN6 1023 aaKnown RBP22.6■■□□□ 1.21
ROM1-202ENST00000525801 PROSER2Q86WR7 435 aaPredicted RBP22.59■■□□□ 1.21
ROM1-202ENST00000525801 PIK3C2BO00750 1634 aa22.59■■□□□ 1.21
ROM1-202ENST00000525801 ITGAEP38570 1179 aa22.58■■□□□ 1.21
ROM1-202ENST00000525801 ARHGAP23Q9P227 1491 aa22.58■■□□□ 1.2
ROM1-202ENST00000525801 SLIT1O75093 1534 aa22.57■■□□□ 1.2
ROM1-202ENST00000525801 PPP1R15AO75807 674 aaPredicted RBP22.55■■□□□ 1.2
ROM1-202ENST00000525801 TMEM94Q12767 1356 aa22.54■■□□□ 1.2
ROM1-202ENST00000525801 EFCAB6Q5THR3 1501 aa22.54■■□□□ 1.2
ROM1-202ENST00000525801 NUTM2DQ5VT03 806 aaPredicted RBP22.54■■□□□ 1.2
ROM1-202ENST00000525801 KCNA6P17658 529 aa22.53■■□□□ 1.2
ROM1-202ENST00000525801 SYNMO15061 1565 aa22.52■■□□□ 1.2
ROM1-202ENST00000525801 ANKRD50Q9ULJ7 1429 aa22.5■■□□□ 1.19
ROM1-202ENST00000525801 SLC52A1Q9NWF4 448 aa22.5■■□□□ 1.19
ROM1-202ENST00000525801 LMTK2Q8IWU2 1503 aa22.47■■□□□ 1.19
ROM1-202ENST00000525801 NOS1P29475 1434 aa22.47■■□□□ 1.19
ROM1-202ENST00000525801 C14orf37Q86TY3 774 aa22.46■■□□□ 1.19
ROM1-202ENST00000525801 ADGRL2O95490 1459 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms