RNA–Protein interactions for RNA: ENST00000525208.1

GSDMD-203, Transcript of gasdermin D, humanhuman

TSL 3

Gene GSDMD, Length 691 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-203ENST00000525208 SHANK2Q9UPX8 1470 aa32.65■■■□□ 2.82
GSDMD-203ENST00000525208 KDM5DQ9BY66 1539 aa32.65■■■□□ 2.82
GSDMD-203ENST00000525208 DNMT1P26358 1616 aaKnown RBP32.65■■■□□ 2.82
GSDMD-203ENST00000525208 FAM135AQ9P2D6 1515 aa32.64■■■□□ 2.82
GSDMD-203ENST00000525208 RNF17Q9BXT8 1623 aaKnown RBP32.62■■■□□ 2.81
GSDMD-203ENST00000525208 EIF2AK4Q9P2K8 1649 aaKnown RBP32.62■■■□□ 2.81
GSDMD-203ENST00000525208 DUOX2Q9NRD8 1548 aa32.61■■■□□ 2.81
GSDMD-203ENST00000525208 FBXO31Q5XUX0 539 aaPredicted RBP32.61■■■□□ 2.81
GSDMD-203ENST00000525208 RRP7BPQ9NSQ0 103 aa32.61■■■□□ 2.81
GSDMD-203ENST00000525208 DMRT2Q9Y5R5 561 aa32.61■■■□□ 2.81
GSDMD-203ENST00000525208 MYO3AQ8NEV4 1616 aa32.61■■■□□ 2.81
GSDMD-203ENST00000525208 KIF15Q9NS87 1388 aa32.59■■■□□ 2.81
GSDMD-203ENST00000525208 PZPP20742 1482 aa32.57■■■□□ 2.8
GSDMD-203ENST00000525208 ZNF142P52746 1687 aaPredicted RBP32.56■■■□□ 2.8
GSDMD-203ENST00000525208 CAMSAP1Q5T5Y3 1602 aa32.56■■■□□ 2.8
GSDMD-203ENST00000525208 CHIC2Q9UKJ5 165 aa32.56■■■□□ 2.8
GSDMD-203ENST00000525208 NCOA1Q15788 1441 aa32.56■■■□□ 2.8
GSDMD-203ENST00000525208 MROH1Q8NDA8 1641 aa32.55■■■□□ 2.8
GSDMD-203ENST00000525208 CEP170BQ9Y4F5 1589 aaPredicted RBP32.54■■■□□ 2.8
GSDMD-203ENST00000525208 FAM50AQ14320 339 aaKnown RBP32.53■■■□□ 2.8
GSDMD-203ENST00000525208 ABCC3O15438 1527 aa32.52■■■□□ 2.8
GSDMD-203ENST00000525208 PTPRTO14522 1441 aa32.51■■■□□ 2.8
GSDMD-203ENST00000525208 TNRQ92752 1358 aa32.51■■■□□ 2.79
GSDMD-203ENST00000525208 FBXO41Q8TF61 875 aa32.5■■■□□ 2.79
GSDMD-203ENST00000525208 ERBINQ96RT1 1412 aa32.5■■■□□ 2.79
GSDMD-203ENST00000525208 ANKRD30AQ9BXX3 1397 aa32.49■■■□□ 2.79
GSDMD-203ENST00000525208 ZC3H13Q5T200 1668 aaKnown RBP32.49■■■□□ 2.79
GSDMD-203ENST00000525208 A2ML1A8K2U0 1454 aa32.48■■■□□ 2.79
GSDMD-203ENST00000525208 CFAP65Q6ZU64 1925 aaKnown RBP32.48■■■□□ 2.79
GSDMD-203ENST00000525208 CEP152O94986 1710 aa32.47■■■□□ 2.79
GSDMD-203ENST00000525208 NCKAP5LQ9HCH0 1330 aa32.47■■■□□ 2.79
GSDMD-203ENST00000525208 PPARGC1BQ86YN6 1023 aaKnown RBP32.46■■■□□ 2.79
GSDMD-203ENST00000525208 CERKQ8TCT0 537 aa32.45■■■□□ 2.79
GSDMD-203ENST00000525208 PLA2R1Q13018 1463 aa32.43■■■□□ 2.78
GSDMD-203ENST00000525208 ADGRL2O95490 1459 aa32.42■■■□□ 2.78
GSDMD-203ENST00000525208 PRDM15P57071 1507 aaPredicted RBP32.41■■■□□ 2.78
GSDMD-203ENST00000525208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.4■■■□□ 2.786e-6■■■□□ 19.2
GSDMD-203ENST00000525208 PKD2Q13563 968 aa32.39■■■□□ 2.78
GSDMD-203ENST00000525208 DEPDC5O75140 1603 aa32.39■■■□□ 2.78
GSDMD-203ENST00000525208 SPATA31D1Q6ZQQ2 1576 aa32.36■■■□□ 2.77
GSDMD-203ENST00000525208 NLRP1Q9C000 1473 aa32.35■■■□□ 2.77
GSDMD-203ENST00000525208 ERVK-7P63135 1459 aa32.35■■■□□ 2.77
GSDMD-203ENST00000525208 ARHGAP31Q2M1Z3 1444 aa32.31■■■□□ 2.76
GSDMD-203ENST00000525208 KANK1Q14678 1352 aa32.3■■■□□ 2.76
GSDMD-203ENST00000525208 THEMISQ8N1K5 641 aaPredicted RBP32.29■■■□□ 2.76
GSDMD-203ENST00000525208 UGGT1Q9NYU2 1555 aa32.28■■■□□ 2.76
GSDMD-203ENST00000525208 LTBP4Q8N2S1 1624 aa32.28■■■□□ 2.76
GSDMD-203ENST00000525208 VWDEQ8N2E2 1590 aa32.28■■■□□ 2.76
GSDMD-203ENST00000525208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.27■■■□□ 2.76
GSDMD-203ENST00000525208 ANKRD50Q9ULJ7 1429 aa32.26■■■□□ 2.76
GSDMD-203ENST00000525208 POLR1AO95602 1720 aaPredicted RBP32.25■■■□□ 2.75
GSDMD-203ENST00000525208 LMTK2Q8IWU2 1503 aa32.23■■■□□ 2.75
GSDMD-203ENST00000525208 ANKLE2Q86XL3 938 aa32.22■■■□□ 2.75
GSDMD-203ENST00000525208 NEURL4Q96JN8 1562 aa32.21■■■□□ 2.75
GSDMD-203ENST00000525208 ZNF335Q9H4Z2 1342 aaPredicted RBP32.21■■■□□ 2.75
GSDMD-203ENST00000525208 ROCK1Q13464 1354 aa32.19■■■□□ 2.74
GSDMD-203ENST00000525208 ITGAEP38570 1179 aa32.19■■■□□ 2.74
GSDMD-203ENST00000525208 UBR1Q8IWV7 1749 aa32.16■■■□□ 2.74
GSDMD-203ENST00000525208 EFCAB6Q5THR3 1501 aa32.12■■■□□ 2.73
GSDMD-203ENST00000525208 MED14O60244 1454 aa32.1■■■□□ 2.73
GSDMD-203ENST00000525208 NPHP4O75161 1426 aaPredicted RBP32.09■■■□□ 2.73
GSDMD-203ENST00000525208 RRBP1Q9P2E9 1410 aaKnown RBP32.09■■■□□ 2.73
GSDMD-203ENST00000525208 IDI1Q13907 227 aa32.08■■■□□ 2.73
GSDMD-203ENST00000525208 NOS1P29475 1434 aa32.08■■■□□ 2.73
GSDMD-203ENST00000525208 PIK3C2BO00750 1634 aa32.08■■■□□ 2.73
GSDMD-203ENST00000525208 UNC13BO14795 1591 aa32.07■■■□□ 2.72
GSDMD-203ENST00000525208 IQSEC2Q5JU85 1478 aa32.06■■■□□ 2.72
GSDMD-203ENST00000525208 SYNMO15061 1565 aa32.06■■■□□ 2.72
GSDMD-203ENST00000525208 TET3O43151 1660 aa32.04■■■□□ 2.72
GSDMD-203ENST00000525208 IQGAP1P46940 1657 aa32.03■■■□□ 2.72
GSDMD-203ENST00000525208 LTKP29376 864 aa32.03■■■□□ 2.72
GSDMD-203ENST00000525208 ARHGAP23Q9P227 1491 aa32.03■■■□□ 2.72
GSDMD-203ENST00000525208 SLIT1O75093 1534 aa32.01■■■□□ 2.72
GSDMD-203ENST00000525208 RPRD2Q5VT52 1461 aaKnown RBP32.01■■■□□ 2.71
GSDMD-203ENST00000525208 TXNDC2Q86VQ3 553 aa32■■■□□ 2.71
GSDMD-203ENST00000525208 GCC2Q8IWJ2 1684 aa31.99■■■□□ 2.71
GSDMD-203ENST00000525208 STAG3Q9UJ98 1225 aa31.99■■■□□ 2.71
GSDMD-203ENST00000525208 SCAF11Q99590 1463 aaKnown RBP31.98■■■□□ 2.71
GSDMD-203ENST00000525208 KDM5AP29375 1690 aaKnown RBP31.98■■■□□ 2.71
GSDMD-203ENST00000525208 SLC52A1Q9NWF4 448 aa31.97■■■□□ 2.71
GSDMD-203ENST00000525208 IQGAP3Q86VI3 1631 aa31.96■■■□□ 2.71
GSDMD-203ENST00000525208 TMEM2Q9UHN6 1383 aa31.95■■■□□ 2.71
GSDMD-203ENST00000525208 NUP155O75694 1391 aa31.94■■■□□ 2.7
GSDMD-203ENST00000525208 E9PCH4 1651 aa31.94■■■□□ 2.7
GSDMD-203ENST00000525208 EID1Q9Y6B2 187 aa31.93■■■□□ 2.7
GSDMD-203ENST00000525208 CPS1P31327 1500 aa31.91■■■□□ 2.7
GSDMD-203ENST00000525208 STRCP1A6NGW2 1772 aa31.89■■■□□ 2.69
GSDMD-203ENST00000525208 ADGRB3O60242 1522 aa31.88■■■□□ 2.69
GSDMD-203ENST00000525208 MYO5BQ9ULV0 1848 aa31.87■■■□□ 2.69
GSDMD-203ENST00000525208 UBAP1LF5GYI3 381 aa31.86■■■□□ 2.69
GSDMD-203ENST00000525208 NAIPQ13075 1403 aa31.85■■■□□ 2.69
GSDMD-203ENST00000525208 TMEM131LA2VDJ0 1609 aa31.8■■■□□ 2.68
GSDMD-203ENST00000525208 LRRC7Q96NW7 1537 aa31.75■■■□□ 2.67
GSDMD-203ENST00000525208 ZFYVE9O95405 1425 aa31.75■■■□□ 2.67
GSDMD-203ENST00000525208 CHGAP10645 457 aaKnown RBP31.74■■■□□ 2.67
GSDMD-203ENST00000525208 HFM1A2PYH4 1435 aa31.74■■■□□ 2.67
GSDMD-203ENST00000525208 SLC26A8Q96RN1 970 aa31.73■■■□□ 2.67
GSDMD-203ENST00000525208 RIMS2Q9UQ26 1411 aa31.71■■■□□ 2.67
GSDMD-203ENST00000525208 TOM1O60784 492 aa31.7■■■□□ 2.67
GSDMD-203ENST00000525208 SPHKAPQ2M3C7 1700 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms