RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 TROQ12816 1431 aaPredicted RBP13.83□□□□□ -0.2
DEPDC1-205ENST00000525124 SCAPERQ9BY12 1400 aa13.83□□□□□ -0.2
DEPDC1-205ENST00000525124 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
DEPDC1-205ENST00000525124 UBTFP17480 764 aaKnown RBP13.83□□□□□ -0.2
DEPDC1-205ENST00000525124 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
DEPDC1-205ENST00000525124 ARHGEF12Q9NZN5 1544 aa13.82□□□□□ -0.2
DEPDC1-205ENST00000525124 SLC39A7Q92504 469 aa13.82□□□□□ -0.2
DEPDC1-205ENST00000525124 REREQ9P2R6 1566 aa13.82□□□□□ -0.2
DEPDC1-205ENST00000525124 ATP10AO60312 1499 aa13.81□□□□□ -0.2
DEPDC1-205ENST00000525124 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
DEPDC1-205ENST00000525124 C7P10643 843 aa13.81□□□□□ -0.2
DEPDC1-205ENST00000525124 PREX1Q8TCU6 1659 aa13.81□□□□□ -0.2
DEPDC1-205ENST00000525124 CLIP1P30622 1438 aa13.81□□□□□ -0.2
DEPDC1-205ENST00000525124 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
DEPDC1-205ENST00000525124 SETD1BQ9UPS6 1966 aaKnown RBP13.8□□□□□ -0.2
DEPDC1-205ENST00000525124 ATN1P54259 1190 aaPredicted RBP13.8□□□□□ -0.2
DEPDC1-205ENST00000525124 EFCAB2Q5VUJ9 269 aa13.8□□□□□ -0.2
DEPDC1-205ENST00000525124 CDC42BPAQ5VT25 1732 aa13.8□□□□□ -0.2
DEPDC1-205ENST00000525124 C9orf84Q5VXU9 1444 aa13.8□□□□□ -0.2
DEPDC1-205ENST00000525124 ITSN2Q9NZM3 1697 aa13.79□□□□□ -0.2
DEPDC1-205ENST00000525124 MAP3K13O43283 966 aa13.79□□□□□ -0.2
DEPDC1-205ENST00000525124 POTEJP0CG39 1038 aa13.79□□□□□ -0.2
DEPDC1-205ENST00000525124 TRPC6Q9Y210 931 aa13.79□□□□□ -0.2
DEPDC1-205ENST00000525124 ARHGAP5Q13017 1502 aa13.78□□□□□ -0.2
DEPDC1-205ENST00000525124 CASKIN1Q8WXD9 1431 aa13.77□□□□□ -0.21
DEPDC1-205ENST00000525124 DIP2CQ9Y2E4 1556 aa13.77□□□□□ -0.21
DEPDC1-205ENST00000525124 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
DEPDC1-205ENST00000525124 ABCA6Q8N139 1617 aa13.75□□□□□ -0.21
DEPDC1-205ENST00000525124 ABCC1P33527 1531 aa13.75□□□□□ -0.21
DEPDC1-205ENST00000525124 MLH3Q9UHC1 1453 aa13.75□□□□□ -0.21
DEPDC1-205ENST00000525124 FBXO41Q8TF61 875 aa13.75□□□□□ -0.21
DEPDC1-205ENST00000525124 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
DEPDC1-205ENST00000525124 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
DEPDC1-205ENST00000525124 KIDINS220Q9ULH0 1771 aa13.73□□□□□ -0.21
DEPDC1-205ENST00000525124 ATP1B4Q9UN42 357 aaPredicted RBP13.73□□□□□ -0.21
DEPDC1-205ENST00000525124 AGLP35573 1532 aa13.73□□□□□ -0.21
DEPDC1-205ENST00000525124 C3P01024 1663 aa13.72□□□□□ -0.21
DEPDC1-205ENST00000525124 FKBP8Q14318 412 aa13.7□□□□□ -0.22
DEPDC1-205ENST00000525124 STRCQ7RTU9 1775 aa13.7□□□□□ -0.22
DEPDC1-205ENST00000525124 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
DEPDC1-205ENST00000525124 POTEFA5A3E0 1075 aa13.69□□□□□ -0.22
DEPDC1-205ENST00000525124 NUBP1P53384 320 aa13.69□□□□□ -0.22
DEPDC1-205ENST00000525124 TIE1P35590 1138 aa13.68□□□□□ -0.22
DEPDC1-205ENST00000525124 SAMD9LQ8IVG5 1584 aa13.67□□□□□ -0.22
DEPDC1-205ENST00000525124 MLECQ14165 292 aa13.67□□□□□ -0.22
DEPDC1-205ENST00000525124 AFAP1Q8N556 730 aa13.67□□□□□ -0.22
DEPDC1-205ENST00000525124 TRAPPC8Q9Y2L5 1435 aa13.66□□□□□ -0.22
DEPDC1-205ENST00000525124 HSPA2P54652 639 aa13.64□□□□□ -0.23
DEPDC1-205ENST00000525124 ZBTB47Q9UFB7 747 aaPredicted RBP13.64□□□□□ -0.23
DEPDC1-205ENST00000525124 GPATCH8Q9UKJ3 1502 aaKnown RBP13.63□□□□□ -0.23
DEPDC1-205ENST00000525124 UHRF1BP1Q6BDS2 1440 aa13.63□□□□□ -0.23
DEPDC1-205ENST00000525124 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
DEPDC1-205ENST00000525124 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
DEPDC1-205ENST00000525124 MAMSTRQ6ZN01 415 aa13.62□□□□□ -0.23
DEPDC1-205ENST00000525124 SYCP2Q9BX26 1530 aa13.62□□□□□ -0.23
DEPDC1-205ENST00000525124 CNTLNQ9NXG0 1405 aa13.62□□□□□ -0.23
DEPDC1-205ENST00000525124 ADGBQ8N7X0 1667 aa13.62□□□□□ -0.23
DEPDC1-205ENST00000525124 SUPT6HQ7KZ85 1726 aaKnown RBP13.61□□□□□ -0.23
DEPDC1-205ENST00000525124 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
DEPDC1-205ENST00000525124 SGIP1Q9BQI5 828 aa13.61□□□□□ -0.23
DEPDC1-205ENST00000525124 KIAA1107Q9UPP5 1409 aa13.61□□□□□ -0.23
DEPDC1-205ENST00000525124 PLXNC1O60486 1568 aa13.61□□□□□ -0.23
DEPDC1-205ENST00000525124 POTEMA6NI47 508 aa13.6□□□□□ -0.23
DEPDC1-205ENST00000525124 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
DEPDC1-205ENST00000525124 PLSCR2Q9NRY7 297 aa13.59□□□□□ -0.23
DEPDC1-205ENST00000525124 PCDHB13Q9Y5F0 798 aa13.59□□□□□ -0.23
DEPDC1-205ENST00000525124 CEBPAP49715 358 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1-205ENST00000525124 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
DEPDC1-205ENST00000525124 ZNF142P52746 1687 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1-205ENST00000525124 CLTCQ00610 1675 aaKnown RBP13.57□□□□□ -0.24
DEPDC1-205ENST00000525124 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
DEPDC1-205ENST00000525124 COLQQ9Y215 455 aaPredicted RBP13.57□□□□□ -0.24
DEPDC1-205ENST00000525124 EHBP1L1Q8N3D4 1523 aa13.57□□□□□ -0.24
DEPDC1-205ENST00000525124 TIAM1Q13009 1591 aa13.57□□□□□ -0.24
DEPDC1-205ENST00000525124 PTPRTO14522 1441 aa13.56□□□□□ -0.24
DEPDC1-205ENST00000525124 NPATQ14207 1427 aa13.56□□□□□ -0.24
DEPDC1-205ENST00000525124 POTEGQ6S5H5 508 aa13.56□□□□□ -0.24
DEPDC1-205ENST00000525124 SCUBE2Q9NQ36 999 aa13.55□□□□□ -0.24
DEPDC1-205ENST00000525124 IFNL1Q8IU54 200 aa13.54□□□□□ -0.24
DEPDC1-205ENST00000525124 ESF1Q9H501 851 aaKnown RBP13.54□□□□□ -0.24
DEPDC1-205ENST00000525124 CCNB3Q8WWL7 1395 aa13.54□□□□□ -0.24
DEPDC1-205ENST00000525124 FAM212AQ96EL1 285 aa13.53□□□□□ -0.24
DEPDC1-205ENST00000525124 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
DEPDC1-205ENST00000525124 SPAG9O60271 1321 aaKnown RBP13.53□□□□□ -0.24
DEPDC1-205ENST00000525124 MTUS2Q5JR59 1369 aa13.53□□□□□ -0.24
DEPDC1-205ENST00000525124 A2MP01023 1474 aa13.53□□□□□ -0.24
DEPDC1-205ENST00000525124 CEP162Q5TB80 1403 aa13.52□□□□□ -0.25
DEPDC1-205ENST00000525124 MYO3AQ8NEV4 1616 aa13.52□□□□□ -0.25
DEPDC1-205ENST00000525124 IQSEC2Q5JU85 1478 aa13.51□□□□□ -0.25
DEPDC1-205ENST00000525124 RTEL1-TNFRSF6BF6WH68 1400 aa13.51□□□□□ -0.25
DEPDC1-205ENST00000525124 NCOA1Q15788 1441 aa13.51□□□□□ -0.25
DEPDC1-205ENST00000525124 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.25
DEPDC1-205ENST00000525124 LCE2DQ5TA82 110 aaPredicted RBP13.51□□□□□ -0.25
DEPDC1-205ENST00000525124 CFDP1Q9UEE9 299 aaPredicted RBP13.51□□□□□ -0.25
DEPDC1-205ENST00000525124 FAM135AQ9P2D6 1515 aa13.5□□□□□ -0.25
DEPDC1-205ENST00000525124 MBD5Q9P267 1494 aa13.5□□□□□ -0.25
DEPDC1-205ENST00000525124 ZNF777Q9ULD5 760 aaPredicted RBP13.5□□□□□ -0.25
DEPDC1-205ENST00000525124 CAMSAP1Q5T5Y3 1602 aa13.5□□□□□ -0.25
DEPDC1-205ENST00000525124 LTBP4Q8N2S1 1624 aa13.5□□□□□ -0.25
DEPDC1-205ENST00000525124 ZMYM3Q14202 1370 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms