RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 WASHC2CQ9Y4E1 1318 aa19.85■□□□□ 0.77
TRAPPC4-205ENST00000525079 SHANK2Q9UPX8 1470 aa19.85■□□□□ 0.77
TRAPPC4-205ENST00000525079 NPATQ14207 1427 aa19.84■□□□□ 0.77
TRAPPC4-205ENST00000525079 PTPRKQ15262 1439 aa19.84■□□□□ 0.77
TRAPPC4-205ENST00000525079 KIF15Q9NS87 1388 aa19.83■□□□□ 0.77
TRAPPC4-205ENST00000525079 DUOX2Q9NRD8 1548 aa19.83■□□□□ 0.77
TRAPPC4-205ENST00000525079 KDM5DQ9BY66 1539 aa19.81■□□□□ 0.76
TRAPPC4-205ENST00000525079 FBXO31Q5XUX0 539 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC4-205ENST00000525079 RNF17Q9BXT8 1623 aaKnown RBP19.8■□□□□ 0.76
TRAPPC4-205ENST00000525079 EIF2AK4Q9P2K8 1649 aaKnown RBP19.8■□□□□ 0.76
TRAPPC4-205ENST00000525079 ANKRD30AQ9BXX3 1397 aa19.79■□□□□ 0.76
TRAPPC4-205ENST00000525079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.77■□□□□ 0.76
TRAPPC4-205ENST00000525079 STRCQ7RTU9 1775 aa19.77■□□□□ 0.76
TRAPPC4-205ENST00000525079 MROH1Q8NDA8 1641 aa19.76■□□□□ 0.75
TRAPPC4-205ENST00000525079 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
TRAPPC4-205ENST00000525079 FAM135AQ9P2D6 1515 aa19.76■□□□□ 0.75
TRAPPC4-205ENST00000525079 NCOA1Q15788 1441 aa19.76■□□□□ 0.75
TRAPPC4-205ENST00000525079 ABCC3O15438 1527 aa19.75■□□□□ 0.75
TRAPPC4-205ENST00000525079 ERBINQ96RT1 1412 aa19.75■□□□□ 0.75
TRAPPC4-205ENST00000525079 PZPP20742 1482 aa19.74■□□□□ 0.75
TRAPPC4-205ENST00000525079 CEP152O94986 1710 aa19.73■□□□□ 0.75
TRAPPC4-205ENST00000525079 ITGAEP38570 1179 aa19.73■□□□□ 0.75
TRAPPC4-205ENST00000525079 TNRQ92752 1358 aa19.72■□□□□ 0.75
TRAPPC4-205ENST00000525079 CAMSAP1Q5T5Y3 1602 aa19.72■□□□□ 0.75
TRAPPC4-205ENST00000525079 ADGRL2O95490 1459 aa19.72■□□□□ 0.75
TRAPPC4-205ENST00000525079 ZC3H13Q5T200 1668 aaKnown RBP19.71■□□□□ 0.75
TRAPPC4-205ENST00000525079 CEP170BQ9Y4F5 1589 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC4-205ENST00000525079 ILDR1Q86SU0 546 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC4-205ENST00000525079 ZNF142P52746 1687 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC4-205ENST00000525079 DMRT2Q9Y5R5 561 aa19.69■□□□□ 0.74
TRAPPC4-205ENST00000525079 NCKAP5LQ9HCH0 1330 aa19.69■□□□□ 0.74
TRAPPC4-205ENST00000525079 PRDM15P57071 1507 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC4-205ENST00000525079 A2ML1A8K2U0 1454 aa19.67■□□□□ 0.74
TRAPPC4-205ENST00000525079 CFAP65Q6ZU64 1925 aaKnown RBP19.67■□□□□ 0.74
TRAPPC4-205ENST00000525079 DEPDC5O75140 1603 aa19.67■□□□□ 0.74
TRAPPC4-205ENST00000525079 KANK1Q14678 1352 aa19.66■□□□□ 0.74
TRAPPC4-205ENST00000525079 ANKRD50Q9ULJ7 1429 aa19.65■□□□□ 0.74
TRAPPC4-205ENST00000525079 ERVK-7P63135 1459 aa19.63■□□□□ 0.73
TRAPPC4-205ENST00000525079 PTPRTO14522 1441 aa19.63■□□□□ 0.73
TRAPPC4-205ENST00000525079 SPATA31D1Q6ZQQ2 1576 aa19.62■□□□□ 0.73
TRAPPC4-205ENST00000525079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.61■□□□□ 0.733e-6■■■■□ 26.4
TRAPPC4-205ENST00000525079 PLA2R1Q13018 1463 aa19.6■□□□□ 0.73
TRAPPC4-205ENST00000525079 NLRP1Q9C000 1473 aa19.6■□□□□ 0.73
TRAPPC4-205ENST00000525079 ROCK1Q13464 1354 aa19.59■□□□□ 0.73
TRAPPC4-205ENST00000525079 VWDEQ8N2E2 1590 aa19.59■□□□□ 0.73
TRAPPC4-205ENST00000525079 PKD2Q13563 968 aa19.59■□□□□ 0.73
TRAPPC4-205ENST00000525079 ARHGAP31Q2M1Z3 1444 aa19.59■□□□□ 0.73
TRAPPC4-205ENST00000525079 UGGT1Q9NYU2 1555 aa19.58■□□□□ 0.73
TRAPPC4-205ENST00000525079 CERKQ8TCT0 537 aa19.58■□□□□ 0.72
TRAPPC4-205ENST00000525079 RRBP1Q9P2E9 1410 aaKnown RBP19.58■□□□□ 0.72
TRAPPC4-205ENST00000525079 THEMISQ8N1K5 641 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC4-205ENST00000525079 LMTK2Q8IWU2 1503 aa19.56■□□□□ 0.72
TRAPPC4-205ENST00000525079 FBXO41Q8TF61 875 aa19.55■□□□□ 0.72
TRAPPC4-205ENST00000525079 ANKLE2Q86XL3 938 aa19.53■□□□□ 0.72
TRAPPC4-205ENST00000525079 EFCAB6Q5THR3 1501 aa19.52■□□□□ 0.72
TRAPPC4-205ENST00000525079 UNC13BO14795 1591 aa19.52■□□□□ 0.71
TRAPPC4-205ENST00000525079 POLR1AO95602 1720 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC4-205ENST00000525079 ZNF335Q9H4Z2 1342 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC4-205ENST00000525079 UBR1Q8IWV7 1749 aa19.5■□□□□ 0.71
TRAPPC4-205ENST00000525079 NEURL4Q96JN8 1562 aa19.49■□□□□ 0.71
TRAPPC4-205ENST00000525079 PIK3C2BO00750 1634 aa19.48■□□□□ 0.71
TRAPPC4-205ENST00000525079 LTBP4Q8N2S1 1624 aa19.48■□□□□ 0.71
TRAPPC4-205ENST00000525079 IDI1Q13907 227 aa19.48■□□□□ 0.71
TRAPPC4-205ENST00000525079 STAG3Q9UJ98 1225 aa19.48■□□□□ 0.71
TRAPPC4-205ENST00000525079 TET3O43151 1660 aa19.48■□□□□ 0.71
TRAPPC4-205ENST00000525079 SYNMO15061 1565 aa19.48■□□□□ 0.71
TRAPPC4-205ENST00000525079 NUP155O75694 1391 aa19.47■□□□□ 0.71
TRAPPC4-205ENST00000525079 NOS1P29475 1434 aa19.46■□□□□ 0.71
TRAPPC4-205ENST00000525079 GCC2Q8IWJ2 1684 aa19.45■□□□□ 0.7
TRAPPC4-205ENST00000525079 IQGAP3Q86VI3 1631 aa19.44■□□□□ 0.7
TRAPPC4-205ENST00000525079 NPHP4O75161 1426 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC4-205ENST00000525079 RPRD2Q5VT52 1461 aaKnown RBP19.43■□□□□ 0.7
TRAPPC4-205ENST00000525079 TXNDC2Q86VQ3 553 aa19.43■□□□□ 0.7
TRAPPC4-205ENST00000525079 E9PCH4 1651 aa19.43■□□□□ 0.7
TRAPPC4-205ENST00000525079 NAIPQ13075 1403 aa19.42■□□□□ 0.7
TRAPPC4-205ENST00000525079 LTKP29376 864 aa19.42■□□□□ 0.7
TRAPPC4-205ENST00000525079 MED14O60244 1454 aa19.41■□□□□ 0.7
TRAPPC4-205ENST00000525079 IQGAP1P46940 1657 aa19.4■□□□□ 0.7
TRAPPC4-205ENST00000525079 SLC52A1Q9NWF4 448 aa19.4■□□□□ 0.7
TRAPPC4-205ENST00000525079 ARHGAP23Q9P227 1491 aa19.4■□□□□ 0.7
TRAPPC4-205ENST00000525079 EID1Q9Y6B2 187 aa19.39■□□□□ 0.69
TRAPPC4-205ENST00000525079 SCAF11Q99590 1463 aaKnown RBP19.39■□□□□ 0.69
TRAPPC4-205ENST00000525079 SLIT1O75093 1534 aa19.39■□□□□ 0.69
TRAPPC4-205ENST00000525079 TMEM2Q9UHN6 1383 aa19.38■□□□□ 0.69
TRAPPC4-205ENST00000525079 CHGAP10645 457 aaKnown RBP19.37■□□□□ 0.69
TRAPPC4-205ENST00000525079 ADGRB3O60242 1522 aa19.36■□□□□ 0.69
TRAPPC4-205ENST00000525079 KDM5AP29375 1690 aaKnown RBP19.36■□□□□ 0.69
TRAPPC4-205ENST00000525079 TRIM52Q96A61 297 aa19.35■□□□□ 0.69
TRAPPC4-205ENST00000525079 MYO5BQ9ULV0 1848 aa19.35■□□□□ 0.69
TRAPPC4-205ENST00000525079 HFM1A2PYH4 1435 aa19.34■□□□□ 0.69
TRAPPC4-205ENST00000525079 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC4-205ENST00000525079 IQSEC2Q5JU85 1478 aa19.31■□□□□ 0.68
TRAPPC4-205ENST00000525079 TMEM131LA2VDJ0 1609 aa19.31■□□□□ 0.68
TRAPPC4-205ENST00000525079 STRCP1A6NGW2 1772 aa19.29■□□□□ 0.68
TRAPPC4-205ENST00000525079 BCANQ96GW7 911 aa19.29■□□□□ 0.68
TRAPPC4-205ENST00000525079 CPS1P31327 1500 aa19.29■□□□□ 0.68
TRAPPC4-205ENST00000525079 UBAP1LF5GYI3 381 aa19.28■□□□□ 0.68
TRAPPC4-205ENST00000525079 NUTM2DQ5VT03 806 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC4-205ENST00000525079 SLC26A8Q96RN1 970 aa19.28■□□□□ 0.68
TRAPPC4-205ENST00000525079 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms