RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 MYO3AQ8NEV4 1616 aa28.79■■■□□ 2.2
CAPN1-203ENST00000525013 FAM135AQ9P2D6 1515 aa28.79■■■□□ 2.2
CAPN1-203ENST00000525013 TCOF1Q13428 1488 aaKnown RBP28.78■■■□□ 2.2
CAPN1-203ENST00000525013 SHANK2Q9UPX8 1470 aa28.78■■■□□ 2.2
CAPN1-203ENST00000525013 DAPK1P53355 1430 aa28.77■■■□□ 2.2
CAPN1-203ENST00000525013 DNMT1P26358 1616 aaKnown RBP28.77■■■□□ 2.2
CAPN1-203ENST00000525013 EIF2AK4Q9P2K8 1649 aaKnown RBP28.76■■■□□ 2.2
CAPN1-203ENST00000525013 DUOX2Q9NRD8 1548 aa28.76■■■□□ 2.19
CAPN1-203ENST00000525013 RRP7BPQ9NSQ0 103 aa28.76■■■□□ 2.19
CAPN1-203ENST00000525013 RNF17Q9BXT8 1623 aaKnown RBP28.76■■■□□ 2.19
CAPN1-203ENST00000525013 KIF15Q9NS87 1388 aa28.75■■■□□ 2.19
CAPN1-203ENST00000525013 FBXO31Q5XUX0 539 aaPredicted RBP28.75■■■□□ 2.19
CAPN1-203ENST00000525013 CAMSAP1Q5T5Y3 1602 aa28.74■■■□□ 2.19
CAPN1-203ENST00000525013 FAM50AQ14320 339 aaKnown RBP28.73■■■□□ 2.19
CAPN1-203ENST00000525013 CHIC2Q9UKJ5 165 aa28.73■■■□□ 2.19
CAPN1-203ENST00000525013 CEP170BQ9Y4F5 1589 aaPredicted RBP28.73■■■□□ 2.19
CAPN1-203ENST00000525013 ZNF142P52746 1687 aaPredicted RBP28.73■■■□□ 2.19
CAPN1-203ENST00000525013 PZPP20742 1482 aa28.72■■■□□ 2.19
CAPN1-203ENST00000525013 NCOA1Q15788 1441 aa28.72■■■□□ 2.19
CAPN1-203ENST00000525013 FBXO41Q8TF61 875 aa28.72■■■□□ 2.19
CAPN1-203ENST00000525013 TNRQ92752 1358 aa28.7■■■□□ 2.18
CAPN1-203ENST00000525013 ABCC3O15438 1527 aa28.68■■■□□ 2.18
CAPN1-203ENST00000525013 PTPRTO14522 1441 aa28.68■■■□□ 2.18
CAPN1-203ENST00000525013 ZC3H13Q5T200 1668 aaKnown RBP28.67■■■□□ 2.18
CAPN1-203ENST00000525013 ANKRD30AQ9BXX3 1397 aa28.66■■■□□ 2.18
CAPN1-203ENST00000525013 CERKQ8TCT0 537 aa28.66■■■□□ 2.18
CAPN1-203ENST00000525013 NCKAP5LQ9HCH0 1330 aa28.66■■■□□ 2.18
CAPN1-203ENST00000525013 A2ML1A8K2U0 1454 aa28.66■■■□□ 2.18
CAPN1-203ENST00000525013 MROH1Q8NDA8 1641 aa28.65■■■□□ 2.18
CAPN1-203ENST00000525013 CFAP65Q6ZU64 1925 aaKnown RBP28.65■■■□□ 2.18
CAPN1-203ENST00000525013 ERBINQ96RT1 1412 aa28.65■■■□□ 2.18
CAPN1-203ENST00000525013 CEP152O94986 1710 aa28.64■■■□□ 2.18
CAPN1-203ENST00000525013 PPARGC1BQ86YN6 1023 aaKnown RBP28.62■■■□□ 2.17
CAPN1-203ENST00000525013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.62■■■□□ 2.179e-6■□□□□ 10.7
CAPN1-203ENST00000525013 PLA2R1Q13018 1463 aa28.6■■■□□ 2.17
CAPN1-203ENST00000525013 PKD2Q13563 968 aa28.6■■■□□ 2.17
CAPN1-203ENST00000525013 PRDM15P57071 1507 aaPredicted RBP28.56■■■□□ 2.16
CAPN1-203ENST00000525013 NLRP1Q9C000 1473 aa28.54■■■□□ 2.16
CAPN1-203ENST00000525013 KANK1Q14678 1352 aa28.54■■■□□ 2.16
CAPN1-203ENST00000525013 ADGRL2O95490 1459 aa28.53■■■□□ 2.16
CAPN1-203ENST00000525013 DEPDC5O75140 1603 aa28.53■■■□□ 2.16
CAPN1-203ENST00000525013 ERVK-7P63135 1459 aa28.53■■■□□ 2.16
CAPN1-203ENST00000525013 SPATA31D1Q6ZQQ2 1576 aa28.52■■■□□ 2.16
CAPN1-203ENST00000525013 THEMISQ8N1K5 641 aaPredicted RBP28.51■■■□□ 2.15
CAPN1-203ENST00000525013 UGGT1Q9NYU2 1555 aa28.5■■■□□ 2.15
CAPN1-203ENST00000525013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.48■■■□□ 2.15
CAPN1-203ENST00000525013 POLR1AO95602 1720 aaPredicted RBP28.47■■■□□ 2.15
CAPN1-203ENST00000525013 ARHGAP31Q2M1Z3 1444 aa28.45■■■□□ 2.15
CAPN1-203ENST00000525013 LTBP4Q8N2S1 1624 aa28.45■■■□□ 2.14
CAPN1-203ENST00000525013 ANKLE2Q86XL3 938 aa28.45■■■□□ 2.14
CAPN1-203ENST00000525013 ANKRD50Q9ULJ7 1429 aa28.44■■■□□ 2.14
CAPN1-203ENST00000525013 ITGAEP38570 1179 aa28.44■■■□□ 2.14
CAPN1-203ENST00000525013 ZNF335Q9H4Z2 1342 aaPredicted RBP28.43■■■□□ 2.14
CAPN1-203ENST00000525013 VWDEQ8N2E2 1590 aa28.4■■■□□ 2.14
CAPN1-203ENST00000525013 NEURL4Q96JN8 1562 aa28.39■■■□□ 2.14
CAPN1-203ENST00000525013 LMTK2Q8IWU2 1503 aa28.38■■■□□ 2.13
CAPN1-203ENST00000525013 UBR1Q8IWV7 1749 aa28.36■■■□□ 2.13
CAPN1-203ENST00000525013 ROCK1Q13464 1354 aa28.35■■■□□ 2.13
CAPN1-203ENST00000525013 EFCAB6Q5THR3 1501 aa28.33■■■□□ 2.13
CAPN1-203ENST00000525013 NPHP4O75161 1426 aaPredicted RBP28.32■■■□□ 2.12
CAPN1-203ENST00000525013 STAG3Q9UJ98 1225 aa28.31■■■□□ 2.12
CAPN1-203ENST00000525013 PIK3C2BO00750 1634 aa28.29■■■□□ 2.12
CAPN1-203ENST00000525013 MED14O60244 1454 aa28.29■■■□□ 2.12
CAPN1-203ENST00000525013 IQSEC2Q5JU85 1478 aa28.29■■■□□ 2.12
CAPN1-203ENST00000525013 IQGAP1P46940 1657 aa28.28■■■□□ 2.12
CAPN1-203ENST00000525013 UNC13BO14795 1591 aa28.26■■■□□ 2.11
CAPN1-203ENST00000525013 IDI1Q13907 227 aa28.26■■■□□ 2.11
CAPN1-203ENST00000525013 TET3O43151 1660 aa28.26■■■□□ 2.11
CAPN1-203ENST00000525013 SYNMO15061 1565 aa28.25■■■□□ 2.11
CAPN1-203ENST00000525013 TXNDC2Q86VQ3 553 aa28.24■■■□□ 2.11
CAPN1-203ENST00000525013 NOS1P29475 1434 aa28.24■■■□□ 2.11
CAPN1-203ENST00000525013 EID1Q9Y6B2 187 aa28.23■■■□□ 2.11
CAPN1-203ENST00000525013 SCAF11Q99590 1463 aaKnown RBP28.22■■■□□ 2.11
CAPN1-203ENST00000525013 RRBP1Q9P2E9 1410 aaKnown RBP28.22■■■□□ 2.11
CAPN1-203ENST00000525013 GCC2Q8IWJ2 1684 aa28.22■■■□□ 2.11
CAPN1-203ENST00000525013 RPRD2Q5VT52 1461 aaKnown RBP28.21■■■□□ 2.11
CAPN1-203ENST00000525013 LTKP29376 864 aa28.21■■■□□ 2.11
CAPN1-203ENST00000525013 SLIT1O75093 1534 aa28.21■■■□□ 2.11
CAPN1-203ENST00000525013 ARHGAP23Q9P227 1491 aa28.21■■■□□ 2.11
CAPN1-203ENST00000525013 SLC52A1Q9NWF4 448 aa28.2■■■□□ 2.1
CAPN1-203ENST00000525013 CPS1P31327 1500 aa28.18■■■□□ 2.1
CAPN1-203ENST00000525013 UBAP1LF5GYI3 381 aa28.18■■■□□ 2.1
CAPN1-203ENST00000525013 NUP155O75694 1391 aa28.18■■■□□ 2.1
CAPN1-203ENST00000525013 TMEM2Q9UHN6 1383 aa28.18■■■□□ 2.1
CAPN1-203ENST00000525013 KDM5AP29375 1690 aaKnown RBP28.18■■■□□ 2.1
CAPN1-203ENST00000525013 IQGAP3Q86VI3 1631 aa28.16■■■□□ 2.1
CAPN1-203ENST00000525013 E9PCH4 1651 aa28.14■■■□□ 2.1
CAPN1-203ENST00000525013 ADGRB3O60242 1522 aa28.13■■■□□ 2.09
CAPN1-203ENST00000525013 MYO5BQ9ULV0 1848 aa28.1■■■□□ 2.09
CAPN1-203ENST00000525013 STRCP1A6NGW2 1772 aa28.09■■■□□ 2.09
CAPN1-203ENST00000525013 CHGAP10645 457 aaKnown RBP28.06■■■□□ 2.08
CAPN1-203ENST00000525013 BCANQ96GW7 911 aa28.04■■■□□ 2.08
CAPN1-203ENST00000525013 NAIPQ13075 1403 aa28.03■■■□□ 2.08
CAPN1-203ENST00000525013 SCAF1Q9H7N4 1312 aaKnown RBP28.03■■■□□ 2.08
CAPN1-203ENST00000525013 TOM1O60784 492 aa28.02■■■□□ 2.08
CAPN1-203ENST00000525013 TMEM131LA2VDJ0 1609 aa28.02■■■□□ 2.08
CAPN1-203ENST00000525013 SENP3Q9H4L4 574 aaPredicted RBP28.01■■■□□ 2.07
CAPN1-203ENST00000525013 PIP4K2BP78356 416 aa28■■■□□ 2.07
CAPN1-203ENST00000525013 SLC26A8Q96RN1 970 aa28■■■□□ 2.07
CAPN1-203ENST00000525013 LRRC7Q96NW7 1537 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms