RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 NUP155O75694 1391 aa17.51■□□□□ 0.39
CAPN1-202ENST00000524773 KIAA1107Q9UPP5 1409 aa17.5■□□□□ 0.39
CAPN1-202ENST00000524773 KIF15Q9NS87 1388 aa17.5■□□□□ 0.39
CAPN1-202ENST00000524773 NBPF1Q3BBV0 1214 aa17.49■□□□□ 0.39
CAPN1-202ENST00000524773 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
CAPN1-202ENST00000524773 MBD5Q9P267 1494 aa17.49■□□□□ 0.39
CAPN1-202ENST00000524773 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
CAPN1-202ENST00000524773 PTPRGP23470 1445 aa17.48■□□□□ 0.39
CAPN1-202ENST00000524773 LRPPRCP42704 1394 aaKnown RBP17.47■□□□□ 0.39
CAPN1-202ENST00000524773 KDM5CP41229 1560 aa17.47■□□□□ 0.39
CAPN1-202ENST00000524773 BRPF3Q9ULD4 1205 aa17.46■□□□□ 0.39
CAPN1-202ENST00000524773 POLR1AO95602 1720 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-202ENST00000524773 CAMSAP2Q08AD1 1489 aa17.46■□□□□ 0.38
CAPN1-202ENST00000524773 ABCA8O94911 1581 aa17.45■□□□□ 0.38
CAPN1-202ENST00000524773 TROQ12816 1431 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-202ENST00000524773 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
CAPN1-202ENST00000524773 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-202ENST00000524773 HNRNPMP52272 730 aaKnown RBP eCLIP17.43■□□□□ 0.38
CAPN1-202ENST00000524773 RALBP1Q15311 655 aa17.43■□□□□ 0.38
CAPN1-202ENST00000524773 PLEKHD1A6NEE1 506 aa17.43■□□□□ 0.38
CAPN1-202ENST00000524773 ANKRD50Q9ULJ7 1429 aa17.42■□□□□ 0.38
CAPN1-202ENST00000524773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.384e-6■■□□□ 13.3
CAPN1-202ENST00000524773 SHROOM2Q13796 1616 aa17.42■□□□□ 0.38
CAPN1-202ENST00000524773 NLRP13Q86W25 1043 aa17.42■□□□□ 0.38
CAPN1-202ENST00000524773 ATP10BO94823 1461 aa17.4■□□□□ 0.38
CAPN1-202ENST00000524773 PANK3Q9H999 370 aa17.39■□□□□ 0.37
CAPN1-202ENST00000524773 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.37
CAPN1-202ENST00000524773 KIF14Q15058 1648 aa17.38■□□□□ 0.37
CAPN1-202ENST00000524773 ANKRD30AQ9BXX3 1397 aa17.38■□□□□ 0.37
CAPN1-202ENST00000524773 GPATCH8Q9UKJ3 1502 aaKnown RBP17.38■□□□□ 0.37
CAPN1-202ENST00000524773 RGS3P49796 1198 aa17.38■□□□□ 0.37
CAPN1-202ENST00000524773 ARID4BQ4LE39 1312 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-202ENST00000524773 PER1O15534 1290 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-202ENST00000524773 RALGAPBQ86X10 1494 aa17.36■□□□□ 0.37
CAPN1-202ENST00000524773 ERCC6L2Q5T890 1561 aa17.35■□□□□ 0.37
CAPN1-202ENST00000524773 NFKBIBQ15653 356 aa17.35■□□□□ 0.37
CAPN1-202ENST00000524773 ADAMTS8Q9UP79 889 aa17.35■□□□□ 0.37
CAPN1-202ENST00000524773 CLASP1Q7Z460 1538 aa17.34■□□□□ 0.37
CAPN1-202ENST00000524773 DISP3Q9P2K9 1392 aa17.34■□□□□ 0.37
CAPN1-202ENST00000524773 TSPY4P0CV99 314 aa17.33■□□□□ 0.37
CAPN1-202ENST00000524773 TSPY10P0CW01 314 aa17.33■□□□□ 0.37
CAPN1-202ENST00000524773 ADCY10Q96PN6 1610 aa17.33■□□□□ 0.36
CAPN1-202ENST00000524773 MS4A1P11836 297 aa17.33■□□□□ 0.36
CAPN1-202ENST00000524773 FRAT1Q92837 279 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-202ENST00000524773 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.36
CAPN1-202ENST00000524773 ADGRL2O95490 1459 aa17.32■□□□□ 0.36
CAPN1-202ENST00000524773 PARD3Q8TEW0 1356 aa17.32■□□□□ 0.36
CAPN1-202ENST00000524773 ADGBQ8N7X0 1667 aa17.31■□□□□ 0.36
CAPN1-202ENST00000524773 PPM1GO15355 546 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-202ENST00000524773 UHRF1BP1Q6BDS2 1440 aa17.31■□□□□ 0.36
CAPN1-202ENST00000524773 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
CAPN1-202ENST00000524773 DAXXQ9UER7 740 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-202ENST00000524773 PDE3BQ13370 1112 aa17.29■□□□□ 0.36
CAPN1-202ENST00000524773 C9orf84Q5VXU9 1444 aa17.29■□□□□ 0.36
CAPN1-202ENST00000524773 FRAT2O75474 233 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-202ENST00000524773 GSE1Q14687 1217 aa17.28■□□□□ 0.36
CAPN1-202ENST00000524773 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
CAPN1-202ENST00000524773 WASHC2CQ9Y4E1 1318 aa17.26■□□□□ 0.35
CAPN1-202ENST00000524773 TESK2Q96S53 571 aa17.26■□□□□ 0.35
CAPN1-202ENST00000524773 ABCC2Q92887 1545 aa17.26■□□□□ 0.35
CAPN1-202ENST00000524773 ABCC10Q5T3U5 1492 aa17.25■□□□□ 0.35
CAPN1-202ENST00000524773 PLEKHH1Q9ULM0 1364 aa17.25■□□□□ 0.35
CAPN1-202ENST00000524773 C8orf34Q49A92 452 aa17.24■□□□□ 0.35
CAPN1-202ENST00000524773 CROCC2H7BZ55 1655 aa17.24■□□□□ 0.35
CAPN1-202ENST00000524773 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
CAPN1-202ENST00000524773 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-202ENST00000524773 DDRGK1Q96HY6 314 aa17.23■□□□□ 0.35
CAPN1-202ENST00000524773 CDC42BPAQ5VT25 1732 aa17.23■□□□□ 0.35
CAPN1-202ENST00000524773 KDM2BQ8NHM5 1336 aa17.23■□□□□ 0.35
CAPN1-202ENST00000524773 ARXQ96QS3 562 aa17.22■□□□□ 0.35
CAPN1-202ENST00000524773 BCAR3O75815 825 aa17.22■□□□□ 0.35
CAPN1-202ENST00000524773 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
CAPN1-202ENST00000524773 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.35
CAPN1-202ENST00000524773 PRAG1Q86YV5 1406 aa17.21■□□□□ 0.34
CAPN1-202ENST00000524773 CCDC144AA2RUR9 1427 aa17.2■□□□□ 0.34
CAPN1-202ENST00000524773 SHANK2Q9UPX8 1470 aa17.2■□□□□ 0.34
CAPN1-202ENST00000524773 ARHGEF12Q9NZN5 1544 aa17.2■□□□□ 0.34
CAPN1-202ENST00000524773 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
CAPN1-202ENST00000524773 FAM161AQ3B820 660 aa17.19■□□□□ 0.34
CAPN1-202ENST00000524773 E9PCH4 1651 aa17.18■□□□□ 0.34
CAPN1-202ENST00000524773 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
CAPN1-202ENST00000524773 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
CAPN1-202ENST00000524773 SEC24BO95487 1268 aa17.17■□□□□ 0.34
CAPN1-202ENST00000524773 TMF1P82094 1093 aa17.17■□□□□ 0.34
CAPN1-202ENST00000524773 CENPQQ7L2Z9 268 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-202ENST00000524773 UHRF1BP1LA0JNW5 1464 aa17.17■□□□□ 0.34
CAPN1-202ENST00000524773 BLMP54132 1417 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-202ENST00000524773 KDM5DQ9BY66 1539 aa17.16■□□□□ 0.34
CAPN1-202ENST00000524773 ERBINQ96RT1 1412 aa17.16■□□□□ 0.34
CAPN1-202ENST00000524773 IGHDP01880 384 aa17.16■□□□□ 0.34
CAPN1-202ENST00000524773 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
CAPN1-202ENST00000524773 APAF1O14727 1248 aa17.15■□□□□ 0.34
CAPN1-202ENST00000524773 GOLGA2Q08379 1002 aa17.15■□□□□ 0.34
CAPN1-202ENST00000524773 SLKQ9H2G2 1235 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-202ENST00000524773 A2MP01023 1474 aa17.14■□□□□ 0.33
CAPN1-202ENST00000524773 PLA2R1Q13018 1463 aa17.13■□□□□ 0.33
CAPN1-202ENST00000524773 ZCCHC11Q5TAX3 1644 aaKnown RBP17.13■□□□□ 0.33
CAPN1-202ENST00000524773 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
CAPN1-202ENST00000524773 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
CAPN1-202ENST00000524773 COL17A1Q9UMD9 1497 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms