RNA–Protein interactions for RNA: ENST00000524500.5

CTSB-206, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-206ENST00000524500 SHANK2Q9UPX8 1470 aa29.24■■■□□ 2.27
CTSB-206ENST00000524500 DAPK1P53355 1430 aa29.21■■■□□ 2.27
CTSB-206ENST00000524500 DUOX2Q9NRD8 1548 aa29.2■■■□□ 2.27
CTSB-206ENST00000524500 KIF15Q9NS87 1388 aa29.19■■■□□ 2.26
CTSB-206ENST00000524500 EIF2AK4Q9P2K8 1649 aaKnown RBP29.19■■■□□ 2.26
CTSB-206ENST00000524500 RRP7BPQ9NSQ0 103 aa29.18■■■□□ 2.26
CTSB-206ENST00000524500 DNMT1P26358 1616 aaKnown RBP29.18■■■□□ 2.26
CTSB-206ENST00000524500 CROCC2H7BZ55 1655 aa29.18■■■□□ 2.26
CTSB-206ENST00000524500 STRCQ7RTU9 1775 aa29.17■■■□□ 2.26
CTSB-206ENST00000524500 RNF17Q9BXT8 1623 aaKnown RBP29.16■■■□□ 2.26
CTSB-206ENST00000524500 PZPP20742 1482 aa29.16■■■□□ 2.26
CTSB-206ENST00000524500 MYO3AQ8NEV4 1616 aa29.16■■■□□ 2.26
CTSB-206ENST00000524500 NCOA1Q15788 1441 aa29.15■■■□□ 2.26
CTSB-206ENST00000524500 FAM50AQ14320 339 aaKnown RBP29.15■■■□□ 2.26
CTSB-206ENST00000524500 ANKRD30AQ9BXX3 1397 aa29.13■■■□□ 2.25
CTSB-206ENST00000524500 FBXO31Q5XUX0 539 aaPredicted RBP29.13■■■□□ 2.25
CTSB-206ENST00000524500 FBXO41Q8TF61 875 aa29.13■■■□□ 2.25
CTSB-206ENST00000524500 TNRQ92752 1358 aa29.13■■■□□ 2.25
CTSB-206ENST00000524500 CAMSAP1Q5T5Y3 1602 aa29.12■■■□□ 2.25
CTSB-206ENST00000524500 PTPRTO14522 1441 aa29.12■■■□□ 2.25
CTSB-206ENST00000524500 CHIC2Q9UKJ5 165 aa29.12■■■□□ 2.25
CTSB-206ENST00000524500 CEP170BQ9Y4F5 1589 aaPredicted RBP29.12■■■□□ 2.25
CTSB-206ENST00000524500 ERBINQ96RT1 1412 aa29.11■■■□□ 2.25
CTSB-206ENST00000524500 ZNF142P52746 1687 aaPredicted RBP29.11■■■□□ 2.25
CTSB-206ENST00000524500 ABCC3O15438 1527 aa29.09■■■□□ 2.25
CTSB-206ENST00000524500 A2ML1A8K2U0 1454 aa29.08■■■□□ 2.25
CTSB-206ENST00000524500 ZC3H13Q5T200 1668 aaKnown RBP29.08■■■□□ 2.25
CTSB-206ENST00000524500 PKD2Q13563 968 aa29.06■■■□□ 2.24
CTSB-206ENST00000524500 CERKQ8TCT0 537 aa29.06■■■□□ 2.24
CTSB-206ENST00000524500 PLA2R1Q13018 1463 aa29.05■■■□□ 2.24
CTSB-206ENST00000524500 MROH1Q8NDA8 1641 aa29.04■■■□□ 2.24
CTSB-206ENST00000524500 NCKAP5LQ9HCH0 1330 aa29.03■■■□□ 2.24
CTSB-206ENST00000524500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.01■■■□□ 2.23
CTSB-206ENST00000524500 KANK1Q14678 1352 aa29.01■■■□□ 2.23
CTSB-206ENST00000524500 NLRP1Q9C000 1473 aa29■■■□□ 2.23
CTSB-206ENST00000524500 PRDM15P57071 1507 aaPredicted RBP28.99■■■□□ 2.23
CTSB-206ENST00000524500 ADGRL2O95490 1459 aa28.99■■■□□ 2.23
CTSB-206ENST00000524500 PPARGC1BQ86YN6 1023 aaKnown RBP28.96■■■□□ 2.23
CTSB-206ENST00000524500 THEMISQ8N1K5 641 aaPredicted RBP28.96■■■□□ 2.23
CTSB-206ENST00000524500 CEP152O94986 1710 aa28.95■■■□□ 2.23
CTSB-206ENST00000524500 SPATA31D1Q6ZQQ2 1576 aa28.95■■■□□ 2.22
CTSB-206ENST00000524500 ERVK-7P63135 1459 aa28.94■■■□□ 2.22
CTSB-206ENST00000524500 DEPDC5O75140 1603 aa28.93■■■□□ 2.22
CTSB-206ENST00000524500 ARHGAP31Q2M1Z3 1444 aa28.92■■■□□ 2.22
CTSB-206ENST00000524500 UGGT1Q9NYU2 1555 aa28.92■■■□□ 2.22
CTSB-206ENST00000524500 ANKRD50Q9ULJ7 1429 aa28.89■■■□□ 2.22
CTSB-206ENST00000524500 ANKLE2Q86XL3 938 aa28.89■■■□□ 2.22
CTSB-206ENST00000524500 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.88■■■□□ 2.212e-6■■□□□ 11.9
CTSB-206ENST00000524500 LMTK2Q8IWU2 1503 aa28.84■■■□□ 2.21
CTSB-206ENST00000524500 ROCK1Q13464 1354 aa28.83■■■□□ 2.21
CTSB-206ENST00000524500 LTBP4Q8N2S1 1624 aa28.83■■■□□ 2.21
CTSB-206ENST00000524500 ITGAEP38570 1179 aa28.82■■■□□ 2.2
CTSB-206ENST00000524500 VWDEQ8N2E2 1590 aa28.82■■■□□ 2.2
CTSB-206ENST00000524500 ZNF335Q9H4Z2 1342 aaPredicted RBP28.81■■■□□ 2.2
CTSB-206ENST00000524500 CFAP65Q6ZU64 1925 aaKnown RBP28.81■■■□□ 2.2
CTSB-206ENST00000524500 POLR1AO95602 1720 aaPredicted RBP28.8■■■□□ 2.2
CTSB-206ENST00000524500 NEURL4Q96JN8 1562 aa28.76■■■□□ 2.19
CTSB-206ENST00000524500 IQSEC2Q5JU85 1478 aa28.75■■■□□ 2.19
CTSB-206ENST00000524500 STAG3Q9UJ98 1225 aa28.74■■■□□ 2.19
CTSB-206ENST00000524500 EFCAB6Q5THR3 1501 aa28.74■■■□□ 2.19
CTSB-206ENST00000524500 NPHP4O75161 1426 aaPredicted RBP28.73■■■□□ 2.19
CTSB-206ENST00000524500 MED14O60244 1454 aa28.72■■■□□ 2.19
CTSB-206ENST00000524500 UBR1Q8IWV7 1749 aa28.71■■■□□ 2.19
CTSB-206ENST00000524500 RPRD2Q5VT52 1461 aaKnown RBP28.69■■■□□ 2.18
CTSB-206ENST00000524500 RRBP1Q9P2E9 1410 aaKnown RBP28.69■■■□□ 2.18
CTSB-206ENST00000524500 IDI1Q13907 227 aa28.68■■■□□ 2.18
CTSB-206ENST00000524500 NOS1P29475 1434 aa28.68■■■□□ 2.18
CTSB-206ENST00000524500 EID1Q9Y6B2 187 aa28.67■■■□□ 2.18
CTSB-206ENST00000524500 UNC13BO14795 1591 aa28.67■■■□□ 2.18
CTSB-206ENST00000524500 TXNDC2Q86VQ3 553 aa28.66■■■□□ 2.18
CTSB-206ENST00000524500 SLC52A1Q9NWF4 448 aa28.66■■■□□ 2.18
CTSB-206ENST00000524500 SCAF11Q99590 1463 aaKnown RBP28.65■■■□□ 2.18
CTSB-206ENST00000524500 PIK3C2BO00750 1634 aa28.65■■■□□ 2.18
CTSB-206ENST00000524500 SLIT1O75093 1534 aa28.64■■■□□ 2.18
CTSB-206ENST00000524500 TET3O43151 1660 aa28.64■■■□□ 2.17
CTSB-206ENST00000524500 IQGAP1P46940 1657 aa28.64■■■□□ 2.17
CTSB-206ENST00000524500 ARHGAP23Q9P227 1491 aa28.63■■■□□ 2.17
CTSB-206ENST00000524500 SYNMO15061 1565 aa28.62■■■□□ 2.17
CTSB-206ENST00000524500 TMEM2Q9UHN6 1383 aa28.62■■■□□ 2.17
CTSB-206ENST00000524500 CPS1P31327 1500 aa28.61■■■□□ 2.17
CTSB-206ENST00000524500 LTKP29376 864 aa28.61■■■□□ 2.17
CTSB-206ENST00000524500 NUP155O75694 1391 aa28.61■■■□□ 2.17
CTSB-206ENST00000524500 KDM5AP29375 1690 aaKnown RBP28.6■■■□□ 2.17
CTSB-206ENST00000524500 GCC2Q8IWJ2 1684 aa28.58■■■□□ 2.16
CTSB-206ENST00000524500 UBAP1LF5GYI3 381 aa28.56■■■□□ 2.16
CTSB-206ENST00000524500 IQGAP3Q86VI3 1631 aa28.56■■■□□ 2.16
CTSB-206ENST00000524500 ADGRB3O60242 1522 aa28.54■■■□□ 2.16
CTSB-206ENST00000524500 E9PCH4 1651 aa28.49■■■□□ 2.15
CTSB-206ENST00000524500 HDGFP51858 240 aaKnown RBP28.48■■■□□ 2.15
CTSB-206ENST00000524500 NAIPQ13075 1403 aa28.46■■■□□ 2.15
CTSB-206ENST00000524500 CHGAP10645 457 aaKnown RBP28.46■■■□□ 2.15
CTSB-206ENST00000524500 TOM1O60784 492 aa28.45■■■□□ 2.14
CTSB-206ENST00000524500 BCANQ96GW7 911 aa28.43■■■□□ 2.14
CTSB-206ENST00000524500 PPP1R15AO75807 674 aaPredicted RBP28.41■■■□□ 2.14
CTSB-206ENST00000524500 HFM1A2PYH4 1435 aa28.41■■■□□ 2.14
CTSB-206ENST00000524500 TMEM131LA2VDJ0 1609 aa28.4■■■□□ 2.14
CTSB-206ENST00000524500 RIMS2Q9UQ26 1411 aa28.39■■■□□ 2.14
CTSB-206ENST00000524500 LRRC7Q96NW7 1537 aa28.38■■■□□ 2.13
CTSB-206ENST00000524500 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.38■■■□□ 2.13
CTSB-206ENST00000524500 SLC26A8Q96RN1 970 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms