RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 ZNF326Q5BKZ1 582 aaKnown RBP19.17■□□□□ 0.66
LDLRAD3-202ENST00000524419 ZFYVE16Q7Z3T8 1539 aa19.15■□□□□ 0.66
LDLRAD3-202ENST00000524419 USP47Q96K76 1375 aa19.15■□□□□ 0.66
LDLRAD3-202ENST00000524419 CCDC144AA2RUR9 1427 aa19.15■□□□□ 0.66
LDLRAD3-202ENST00000524419 RTEL1-TNFRSF6BF6WH68 1400 aa19.14■□□□□ 0.65
LDLRAD3-202ENST00000524419 C11orf95C9JLR9 678 aaPredicted RBP19.13■□□□□ 0.65
LDLRAD3-202ENST00000524419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.65
LDLRAD3-202ENST00000524419 FANCAO15360 1455 aa19.12■□□□□ 0.65
LDLRAD3-202ENST00000524419 SPAG9O60271 1321 aaKnown RBP19.11■□□□□ 0.65
LDLRAD3-202ENST00000524419 KIF7Q2M1P5 1343 aa19.11■□□□□ 0.65
LDLRAD3-202ENST00000524419 BCORL1Q5H9F3 1711 aa19.11■□□□□ 0.65
LDLRAD3-202ENST00000524419 ASXL2Q76L83 1435 aa19.11■□□□□ 0.65
LDLRAD3-202ENST00000524419 INO80Q9ULG1 1556 aaPredicted RBP19.11■□□□□ 0.65
LDLRAD3-202ENST00000524419 PLA2R1Q13018 1463 aa19.09■□□□□ 0.65
LDLRAD3-202ENST00000524419 ATP7AQ04656 1500 aa19.08■□□□□ 0.64
LDLRAD3-202ENST00000524419 ATP10AO60312 1499 aa19.08■□□□□ 0.64
LDLRAD3-202ENST00000524419 DEPDC5O75140 1603 aa19.07■□□□□ 0.64
LDLRAD3-202ENST00000524419 TRPM1Q7Z4N2 1603 aa19.07■□□□□ 0.64
LDLRAD3-202ENST00000524419 DCAF11Q8TEB1 546 aa19.07■□□□□ 0.64
LDLRAD3-202ENST00000524419 KDM2AQ9Y2K7 1162 aa19.06■□□□□ 0.64
LDLRAD3-202ENST00000524419 ADGRL1O94910 1474 aa19.06■□□□□ 0.64
LDLRAD3-202ENST00000524419 CARD11Q9BXL7 1154 aa19.05■□□□□ 0.64
LDLRAD3-202ENST00000524419 ARID4BQ4LE39 1312 aaPredicted RBP19.05■□□□□ 0.64
LDLRAD3-202ENST00000524419 PRAG1Q86YV5 1406 aa19.04■□□□□ 0.64
LDLRAD3-202ENST00000524419 AFAP1Q8N556 730 aa19.04■□□□□ 0.64
LDLRAD3-202ENST00000524419 E9PCH4 1651 aa19.04■□□□□ 0.64
LDLRAD3-202ENST00000524419 EIF2AK4Q9P2K8 1649 aaKnown RBP19.03■□□□□ 0.64
LDLRAD3-202ENST00000524419 A2MP01023 1474 aa19.03■□□□□ 0.64
LDLRAD3-202ENST00000524419 CFAP74Q9C0B2 1584 aa19.02■□□□□ 0.64
LDLRAD3-202ENST00000524419 LAMC1P11047 1609 aa19.01■□□□□ 0.63
LDLRAD3-202ENST00000524419 ROCK2O75116 1388 aaKnown RBP19.01■□□□□ 0.63
LDLRAD3-202ENST00000524419 NPM1P06748 294 aaKnown RBP eCLIP19.01■□□□□ 0.63
LDLRAD3-202ENST00000524419 SCAPERQ9BY12 1400 aa19.01■□□□□ 0.63
LDLRAD3-202ENST00000524419 TET3O43151 1660 aa19.01■□□□□ 0.63
LDLRAD3-202ENST00000524419 SPHKAPQ2M3C7 1700 aa19.01■□□□□ 0.63
LDLRAD3-202ENST00000524419 PRKRIP1Q9H875 184 aaPredicted RBP19■□□□□ 0.63
LDLRAD3-202ENST00000524419 TRPM2O94759 1503 aa18.98■□□□□ 0.63
LDLRAD3-202ENST00000524419 CEP152O94986 1710 aa18.98■□□□□ 0.63
LDLRAD3-202ENST00000524419 RGL3Q3MIN7 710 aa18.97■□□□□ 0.63
LDLRAD3-202ENST00000524419 VWDEQ8N2E2 1590 aa18.97■□□□□ 0.63
LDLRAD3-202ENST00000524419 KANK1Q14678 1352 aa18.96■□□□□ 0.63
LDLRAD3-202ENST00000524419 KIDINS220Q9ULH0 1771 aa18.95■□□□□ 0.62
LDLRAD3-202ENST00000524419 PRDM15P57071 1507 aaPredicted RBP18.95■□□□□ 0.62
LDLRAD3-202ENST00000524419 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
LDLRAD3-202ENST00000524419 GPRASP1Q5JY77 1395 aa18.94■□□□□ 0.62
LDLRAD3-202ENST00000524419 DHX29Q7Z478 1369 aaKnown RBP18.94■□□□□ 0.62
LDLRAD3-202ENST00000524419 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
LDLRAD3-202ENST00000524419 MYT1LQ9UL68 1186 aa18.93■□□□□ 0.62
LDLRAD3-202ENST00000524419 RNF17Q9BXT8 1623 aaKnown RBP18.93■□□□□ 0.62
LDLRAD3-202ENST00000524419 ST20-MTHFSA0A0A6YYL1 179 aa18.93■□□□□ 0.62
LDLRAD3-202ENST00000524419 MROH1Q8NDA8 1641 aa18.92■□□□□ 0.62
LDLRAD3-202ENST00000524419 AEBP2Q6ZN18 517 aaPredicted RBP18.92■□□□□ 0.62
LDLRAD3-202ENST00000524419 CLTCL1P53675 1640 aa18.92■□□□□ 0.62
LDLRAD3-202ENST00000524419 PTPRTO14522 1441 aa18.92■□□□□ 0.62
LDLRAD3-202ENST00000524419 HNRNPUQ00839 825 aaKnown RBP eCLIP18.91■□□□□ 0.62
LDLRAD3-202ENST00000524419 CD109Q6YHK3 1445 aa18.91■□□□□ 0.62
LDLRAD3-202ENST00000524419 MRS2Q9HD23 443 aa18.9■□□□□ 0.62
LDLRAD3-202ENST00000524419 MADDQ8WXG6 1647 aa18.89■□□□□ 0.61
LDLRAD3-202ENST00000524419 KIF3BO15066 747 aa18.88■□□□□ 0.61
LDLRAD3-202ENST00000524419 CCDC184Q52MB2 194 aa18.88■□□□□ 0.61
LDLRAD3-202ENST00000524419 POGZQ7Z3K3 1410 aa18.88■□□□□ 0.61
LDLRAD3-202ENST00000524419 FKBP8Q14318 412 aa18.87■□□□□ 0.61
LDLRAD3-202ENST00000524419 NEFLP07196 543 aa18.86■□□□□ 0.61
LDLRAD3-202ENST00000524419 HECW2Q9P2P5 1572 aa18.86■□□□□ 0.61
LDLRAD3-202ENST00000524419 EFCAB6Q5THR3 1501 aa18.86■□□□□ 0.61
LDLRAD3-202ENST00000524419 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
LDLRAD3-202ENST00000524419 NEURL4Q96JN8 1562 aa18.85■□□□□ 0.61
LDLRAD3-202ENST00000524419 MYT1Q01538 1121 aa18.84■□□□□ 0.61
LDLRAD3-202ENST00000524419 COL17A1Q9UMD9 1497 aaPredicted RBP18.83■□□□□ 0.61
LDLRAD3-202ENST00000524419 LMTK2Q8IWU2 1503 aa18.83■□□□□ 0.6
LDLRAD3-202ENST00000524419 PPRC1Q5VV67 1664 aaKnown RBP18.83■□□□□ 0.6
LDLRAD3-202ENST00000524419 KIF1BO60333 1816 aa18.83■□□□□ 0.6
LDLRAD3-202ENST00000524419 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
LDLRAD3-202ENST00000524419 IQGAP1P46940 1657 aa18.82■□□□□ 0.6
LDLRAD3-202ENST00000524419 NEO1Q92859 1461 aa18.82■□□□□ 0.6
LDLRAD3-202ENST00000524419 FAM9BQ8IZU0 186 aa18.81■□□□□ 0.6
LDLRAD3-202ENST00000524419 STAC3Q96MF2 364 aa18.81■□□□□ 0.6
LDLRAD3-202ENST00000524419 TSHZ2Q9NRE2 1034 aa18.81■□□□□ 0.6
LDLRAD3-202ENST00000524419 FRMPD1Q5SYB0 1578 aa18.79■□□□□ 0.6
LDLRAD3-202ENST00000524419 ABCA6Q8N139 1617 aa18.79■□□□□ 0.6
LDLRAD3-202ENST00000524419 KTN1Q86UP2 1357 aaKnown RBP18.79■□□□□ 0.6
LDLRAD3-202ENST00000524419 KIAA1210Q9ULL0 1709 aa18.79■□□□□ 0.6
LDLRAD3-202ENST00000524419 KIF13AQ9H1H9 1805 aa18.77■□□□□ 0.59
LDLRAD3-202ENST00000524419 BCANQ96GW7 911 aa18.76■□□□□ 0.59
LDLRAD3-202ENST00000524419 IFT172Q9UG01 1749 aa18.76■□□□□ 0.59
LDLRAD3-202ENST00000524419 MAP3K4Q9Y6R4 1608 aa18.76■□□□□ 0.59
LDLRAD3-202ENST00000524419 CNGB1Q14028 1251 aaPredicted RBP18.75■□□□□ 0.59
LDLRAD3-202ENST00000524419 DISP3Q9P2K9 1392 aa18.75■□□□□ 0.59
LDLRAD3-202ENST00000524419 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
LDLRAD3-202ENST00000524419 TESK2Q96S53 571 aa18.75■□□□□ 0.59
LDLRAD3-202ENST00000524419 UGGT1Q9NYU2 1555 aa18.75■□□□□ 0.59
LDLRAD3-202ENST00000524419 MROH2AA6NES4 1674 aa18.74■□□□□ 0.59
LDLRAD3-202ENST00000524419 FAM69CQ0P6D2 419 aa18.74■□□□□ 0.59
LDLRAD3-202ENST00000524419 MYOM2P54296 1465 aa18.74■□□□□ 0.59
LDLRAD3-202ENST00000524419 TMF1P82094 1093 aa18.73■□□□□ 0.59
LDLRAD3-202ENST00000524419 RALBP1Q15311 655 aa18.73■□□□□ 0.59
LDLRAD3-202ENST00000524419 RICTORQ6R327 1708 aa18.72■□□□□ 0.59
LDLRAD3-202ENST00000524419 SCAF11Q99590 1463 aaKnown RBP18.72■□□□□ 0.59
LDLRAD3-202ENST00000524419 MYBBP1AQ9BQG0 1328 aaKnown RBP18.7■□□□□ 0.58
LDLRAD3-202ENST00000524419 GLI2P10070 1586 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms