RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 ZNF142P52746 1687 aaPredicted RBP18.66■□□□□ 0.58
SPARC-206ENST00000524277 CEP170BQ9Y4F5 1589 aaPredicted RBP18.66■□□□□ 0.58
SPARC-206ENST00000524277 NCKAP5LQ9HCH0 1330 aa18.66■□□□□ 0.58
SPARC-206ENST00000524277 MYO3AQ8NEV4 1616 aa18.65■□□□□ 0.58
SPARC-206ENST00000524277 A2ML1A8K2U0 1454 aa18.65■□□□□ 0.58
SPARC-206ENST00000524277 KDM5DQ9BY66 1539 aa18.64■□□□□ 0.58
SPARC-206ENST00000524277 APLP2Q06481 763 aa18.64■□□□□ 0.57
SPARC-206ENST00000524277 TCOF1Q13428 1488 aaKnown RBP18.64■□□□□ 0.57
SPARC-206ENST00000524277 LTBP4Q8N2S1 1624 aa18.63■□□□□ 0.57
SPARC-206ENST00000524277 KANK4Q5T7N3 995 aaPredicted RBP18.63■□□□□ 0.57
SPARC-206ENST00000524277 TNRQ92752 1358 aa18.63■□□□□ 0.57
SPARC-206ENST00000524277 PZPP20742 1482 aa18.63■□□□□ 0.57
SPARC-206ENST00000524277 MYOM3Q5VTT5 1437 aa18.62■□□□□ 0.57
SPARC-206ENST00000524277 MAST1Q9Y2H9 1570 aa18.61■□□□□ 0.57
SPARC-206ENST00000524277 FBXO31Q5XUX0 539 aaPredicted RBP18.6■□□□□ 0.57
SPARC-206ENST00000524277 THEMISQ8N1K5 641 aaPredicted RBP18.59■□□□□ 0.57
SPARC-206ENST00000524277 DNMT1P26358 1616 aaKnown RBP18.57■□□□□ 0.56
SPARC-206ENST00000524277 NLRP1Q9C000 1473 aa18.57■□□□□ 0.56
SPARC-206ENST00000524277 ZNF335Q9H4Z2 1342 aaPredicted RBP18.56■□□□□ 0.56
SPARC-206ENST00000524277 ANKLE2Q86XL3 938 aa18.56■□□□□ 0.56
SPARC-206ENST00000524277 EIF2AK4Q9P2K8 1649 aaKnown RBP18.54■□□□□ 0.56
SPARC-206ENST00000524277 RNF17Q9BXT8 1623 aaKnown RBP18.53■□□□□ 0.56
SPARC-206ENST00000524277 DUOX2Q9NRD8 1548 aa18.52■□□□□ 0.56
SPARC-206ENST00000524277 ZC3H13Q5T200 1668 aaKnown RBP18.51■□□□□ 0.55
SPARC-206ENST00000524277 SHANK2Q9UPX8 1470 aa18.51■□□□□ 0.55
SPARC-206ENST00000524277 ABCC3O15438 1527 aa18.5■□□□□ 0.55
SPARC-206ENST00000524277 UBAP1LF5GYI3 381 aa18.49■□□□□ 0.55
SPARC-206ENST00000524277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.49■□□□□ 0.55
SPARC-206ENST00000524277 UGGT1Q9NYU2 1555 aa18.49■□□□□ 0.55
SPARC-206ENST00000524277 KIF15Q9NS87 1388 aa18.48■□□□□ 0.55
SPARC-206ENST00000524277 ERBINQ96RT1 1412 aa18.48■□□□□ 0.55
SPARC-206ENST00000524277 SPATA31D1Q6ZQQ2 1576 aa18.47■□□□□ 0.55
SPARC-206ENST00000524277 ABCC5O15440 1437 aa18.47■□□□□ 0.55
SPARC-206ENST00000524277 MED14O60244 1454 aa18.46■□□□□ 0.55
SPARC-206ENST00000524277 CPS1P31327 1500 aa18.45■□□□□ 0.54
SPARC-206ENST00000524277 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
SPARC-206ENST00000524277 ARHGAP31Q2M1Z3 1444 aa18.45■□□□□ 0.54
SPARC-206ENST00000524277 POLR1AO95602 1720 aaPredicted RBP18.45■□□□□ 0.54
SPARC-206ENST00000524277 ERVK-7P63135 1459 aa18.45■□□□□ 0.54
SPARC-206ENST00000524277 PTPN23Q9H3S7 1636 aa18.45■□□□□ 0.54
SPARC-206ENST00000524277 FGD6Q6ZV73 1430 aa18.44■□□□□ 0.54
SPARC-206ENST00000524277 DEPDC5O75140 1603 aa18.44■□□□□ 0.54
SPARC-206ENST00000524277 KANK1Q14678 1352 aa18.43■□□□□ 0.54
SPARC-206ENST00000524277 DISP3Q9P2K9 1392 aa18.43■□□□□ 0.54
SPARC-206ENST00000524277 NEURL4Q96JN8 1562 aa18.43■□□□□ 0.54
SPARC-206ENST00000524277 NPHP4O75161 1426 aaPredicted RBP18.43■□□□□ 0.54
SPARC-206ENST00000524277 DAPK1P53355 1430 aa18.43■□□□□ 0.54
SPARC-206ENST00000524277 ANKRD30AQ9BXX3 1397 aa18.42■□□□□ 0.54
SPARC-206ENST00000524277 MROH1Q8NDA8 1641 aa18.42■□□□□ 0.54
SPARC-206ENST00000524277 TOM1O60784 492 aa18.42■□□□□ 0.54
SPARC-206ENST00000524277 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.54
SPARC-206ENST00000524277 CROCC2H7BZ55 1655 aa18.38■□□□□ 0.53
SPARC-206ENST00000524277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
SPARC-206ENST00000524277 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
SPARC-206ENST00000524277 CEP152O94986 1710 aa18.35■□□□□ 0.53
SPARC-206ENST00000524277 VWDEQ8N2E2 1590 aa18.35■□□□□ 0.53
SPARC-206ENST00000524277 EID1Q9Y6B2 187 aa18.35■□□□□ 0.53
SPARC-206ENST00000524277 IQGAP1P46940 1657 aa18.34■□□□□ 0.53
SPARC-206ENST00000524277 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.53
SPARC-206ENST00000524277 TXNDC2Q86VQ3 553 aa18.33■□□□□ 0.52
SPARC-206ENST00000524277 SCAF11Q99590 1463 aaKnown RBP18.33■□□□□ 0.52
SPARC-206ENST00000524277 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
SPARC-206ENST00000524277 SLIT1O75093 1534 aa18.32■□□□□ 0.52
SPARC-206ENST00000524277 ADGRL2O95490 1459 aa18.32■□□□□ 0.52
SPARC-206ENST00000524277 ARHGAP23Q9P227 1491 aa18.32■□□□□ 0.52
SPARC-206ENST00000524277 UBR1Q8IWV7 1749 aa18.32■□□□□ 0.52
SPARC-206ENST00000524277 CFAP65Q6ZU64 1925 aaKnown RBP18.31■□□□□ 0.52
SPARC-206ENST00000524277 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
SPARC-206ENST00000524277 FAM50AQ14320 339 aaKnown RBP18.3■□□□□ 0.52
SPARC-206ENST00000524277 LTKP29376 864 aa18.29■□□□□ 0.52
SPARC-206ENST00000524277 PIP4K2BP78356 416 aa18.29■□□□□ 0.52
SPARC-206ENST00000524277 SLC52A1Q9NWF4 448 aa18.29■□□□□ 0.52
SPARC-206ENST00000524277 ILDR2Q71H61 639 aa18.28■□□□□ 0.52
SPARC-206ENST00000524277 TMEM2Q9UHN6 1383 aa18.28■□□□□ 0.52
SPARC-206ENST00000524277 SOCS7O14512 581 aa18.27■□□□□ 0.52
SPARC-206ENST00000524277 IDI1Q13907 227 aa18.27■□□□□ 0.52
SPARC-206ENST00000524277 ANKRD50Q9ULJ7 1429 aa18.26■□□□□ 0.51
SPARC-206ENST00000524277 HSPA1LP34931 641 aa18.26■□□□□ 0.51
SPARC-206ENST00000524277 KDM5AP29375 1690 aaKnown RBP18.25■□□□□ 0.51
SPARC-206ENST00000524277 NOS1P29475 1434 aa18.25■□□□□ 0.51
SPARC-206ENST00000524277 LRRC7Q96NW7 1537 aa18.25■□□□□ 0.51
SPARC-206ENST00000524277 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
SPARC-206ENST00000524277 SYNMO15061 1565 aa18.24■□□□□ 0.51
SPARC-206ENST00000524277 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
SPARC-206ENST00000524277 HDGFP51858 240 aaKnown RBP18.22■□□□□ 0.51
SPARC-206ENST00000524277 PIK3C2BO00750 1634 aa18.22■□□□□ 0.51
SPARC-206ENST00000524277 ROCK1Q13464 1354 aa18.19■□□□□ 0.5
SPARC-206ENST00000524277 KCNA6P17658 529 aa18.19■□□□□ 0.5
SPARC-206ENST00000524277 STRCP1A6NGW2 1772 aa18.18■□□□□ 0.5
SPARC-206ENST00000524277 ALKQ9UM73 1620 aa18.16■□□□□ 0.5
SPARC-206ENST00000524277 ADGRB3O60242 1522 aa18.15■□□□□ 0.5
SPARC-206ENST00000524277 TET3O43151 1660 aa18.13■□□□□ 0.49
SPARC-206ENST00000524277 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.13■□□□□ 0.49
SPARC-206ENST00000524277 BCANQ96GW7 911 aa18.12■□□□□ 0.49
SPARC-206ENST00000524277 SLC26A8Q96RN1 970 aa18.12■□□□□ 0.49
SPARC-206ENST00000524277 PROSER2Q86WR7 435 aaPredicted RBP18.11■□□□□ 0.49
SPARC-206ENST00000524277 UNC13BO14795 1591 aa18.1■□□□□ 0.49
SPARC-206ENST00000524277 TMEM94Q12767 1356 aa18.1■□□□□ 0.49
SPARC-206ENST00000524277 PLEKHG1Q9ULL1 1385 aa18.1■□□□□ 0.49
SPARC-206ENST00000524277 MED1Q15648 1581 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms