RNA–Protein interactions for RNA: ENST00000524112.1

CSGALNACT1-215, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-215ENST00000524112 INO80Q9ULG1 1556 aaPredicted RBP14.24□□□□□ -0.13
CSGALNACT1-215ENST00000524112 CDC42BPAQ5VT25 1732 aa14.23□□□□□ -0.13
CSGALNACT1-215ENST00000524112 VWDEQ8N2E2 1590 aa14.22□□□□□ -0.13
CSGALNACT1-215ENST00000524112 RTEL1-TNFRSF6BF6WH68 1400 aa14.22□□□□□ -0.13
CSGALNACT1-215ENST00000524112 PZPP20742 1482 aa14.21□□□□□ -0.13
CSGALNACT1-215ENST00000524112 TNRQ92752 1358 aa14.2□□□□□ -0.14
CSGALNACT1-215ENST00000524112 NPHP4O75161 1426 aaPredicted RBP14.18□□□□□ -0.14
CSGALNACT1-215ENST00000524112 CASKIN1Q8WXD9 1431 aa14.18□□□□□ -0.14
CSGALNACT1-215ENST00000524112 ALKQ9UM73 1620 aa14.18□□□□□ -0.14
CSGALNACT1-215ENST00000524112 ARHGAP35Q9NRY4 1499 aa14.18□□□□□ -0.14
CSGALNACT1-215ENST00000524112 IQGAP1P46940 1657 aa14.17□□□□□ -0.14
CSGALNACT1-215ENST00000524112 SYCP2Q9BX26 1530 aa14.17□□□□□ -0.14
CSGALNACT1-215ENST00000524112 KDM5DQ9BY66 1539 aa14.17□□□□□ -0.14
CSGALNACT1-215ENST00000524112 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
CSGALNACT1-215ENST00000524112 UGGT1Q9NYU2 1555 aa14.16□□□□□ -0.14
CSGALNACT1-215ENST00000524112 FAM135BQ49AJ0 1406 aa14.15□□□□□ -0.14
CSGALNACT1-215ENST00000524112 RANGAP1P46060 587 aaPredicted RBP14.15□□□□□ -0.14
CSGALNACT1-215ENST00000524112 RSPH4AQ5TD94 716 aa14.15□□□□□ -0.14
CSGALNACT1-215ENST00000524112 LRRC7Q96NW7 1537 aa14.15□□□□□ -0.14
CSGALNACT1-215ENST00000524112 GGT6Q6P531 493 aa14.14□□□□□ -0.15
CSGALNACT1-215ENST00000524112 MIA2Q96PC5 1412 aa14.14□□□□□ -0.15
CSGALNACT1-215ENST00000524112 FYCO1Q9BQS8 1478 aa14.13□□□□□ -0.15
CSGALNACT1-215ENST00000524112 DHX29Q7Z478 1369 aaKnown RBP14.13□□□□□ -0.15
CSGALNACT1-215ENST00000524112 GPATCH8Q9UKJ3 1502 aaKnown RBP14.13□□□□□ -0.15
CSGALNACT1-215ENST00000524112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.12□□□□□ -0.15
CSGALNACT1-215ENST00000524112 LRRIQ1Q96JM4 1722 aa14.12□□□□□ -0.15
CSGALNACT1-215ENST00000524112 LRRC9Q6ZRR7 1453 aa14.12□□□□□ -0.15
CSGALNACT1-215ENST00000524112 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
CSGALNACT1-215ENST00000524112 CFDP1Q9UEE9 299 aaPredicted RBP14.1□□□□□ -0.15
CSGALNACT1-215ENST00000524112 RGS17Q9UGC6 210 aaPredicted RBP14.1□□□□□ -0.15
CSGALNACT1-215ENST00000524112 ZC3H13Q5T200 1668 aaKnown RBP14.09□□□□□ -0.15
CSGALNACT1-215ENST00000524112 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
CSGALNACT1-215ENST00000524112 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
CSGALNACT1-215ENST00000524112 WASHC2CQ9Y4E1 1318 aa14.06□□□□□ -0.16
CSGALNACT1-215ENST00000524112 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
CSGALNACT1-215ENST00000524112 HNRNPMP52272 730 aaKnown RBP eCLIP14.05□□□□□ -0.16
CSGALNACT1-215ENST00000524112 ZNF777Q9ULD5 760 aaPredicted RBP14.04□□□□□ -0.16
CSGALNACT1-215ENST00000524112 SCAF11Q99590 1463 aaKnown RBP14.03□□□□□ -0.16
CSGALNACT1-215ENST00000524112 STRCP1A6NGW2 1772 aa14.02□□□□□ -0.16
CSGALNACT1-215ENST00000524112 SLIT1O75093 1534 aa14.02□□□□□ -0.16
CSGALNACT1-215ENST00000524112 MBD5Q9P267 1494 aa14.02□□□□□ -0.16
CSGALNACT1-215ENST00000524112 KDM5AP29375 1690 aaKnown RBP14.01□□□□□ -0.17
CSGALNACT1-215ENST00000524112 ABCC3O15438 1527 aa14.01□□□□□ -0.17
CSGALNACT1-215ENST00000524112 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
CSGALNACT1-215ENST00000524112 KIF3BO15066 747 aa14□□□□□ -0.17
CSGALNACT1-215ENST00000524112 ZNF772Q68DY9 489 aaPredicted RBP14□□□□□ -0.17
CSGALNACT1-215ENST00000524112 CAMSAP2Q08AD1 1489 aa13.99□□□□□ -0.17
CSGALNACT1-215ENST00000524112 CCDC141Q6ZP82 1450 aa13.99□□□□□ -0.17
CSGALNACT1-215ENST00000524112 ARHGAP23Q9P227 1491 aa13.99□□□□□ -0.17
CSGALNACT1-215ENST00000524112 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
CSGALNACT1-215ENST00000524112 JCADQ9P266 1359 aa13.99□□□□□ -0.17
CSGALNACT1-215ENST00000524112 POTEAQ6S8J7 498 aa13.99□□□□□ -0.17
CSGALNACT1-215ENST00000524112 EIF2AK4Q9P2K8 1649 aaKnown RBP13.98□□□□□ -0.17
CSGALNACT1-215ENST00000524112 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
CSGALNACT1-215ENST00000524112 EID1Q9Y6B2 187 aa13.98□□□□□ -0.17
CSGALNACT1-215ENST00000524112 SPATA31A6Q5VVP1 1343 aa13.97□□□□□ -0.17
CSGALNACT1-215ENST00000524112 FBXO31Q5XUX0 539 aaPredicted RBP13.97□□□□□ -0.17
CSGALNACT1-215ENST00000524112 NKTRP30414 1462 aaKnown RBP13.97□□□□□ -0.17
CSGALNACT1-215ENST00000524112 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.17
CSGALNACT1-215ENST00000524112 UBR1Q8IWV7 1749 aa13.96□□□□□ -0.17
CSGALNACT1-215ENST00000524112 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
CSGALNACT1-215ENST00000524112 XIRP1Q702N8 1843 aaKnown RBP13.96□□□□□ -0.17
CSGALNACT1-215ENST00000524112 NCOA3Q9Y6Q9 1424 aa13.96□□□□□ -0.18
CSGALNACT1-215ENST00000524112 ERVK-7P63135 1459 aa13.95□□□□□ -0.18
CSGALNACT1-215ENST00000524112 ARHGEF5Q12774 1597 aa13.94□□□□□ -0.18
CSGALNACT1-215ENST00000524112 ARHGAP31Q2M1Z3 1444 aa13.94□□□□□ -0.18
CSGALNACT1-215ENST00000524112 CEP162Q5TB80 1403 aa13.94□□□□□ -0.18
CSGALNACT1-215ENST00000524112 ROBO1Q9Y6N7 1651 aa13.94□□□□□ -0.18
CSGALNACT1-215ENST00000524112 EHBP1L1Q8N3D4 1523 aa13.94□□□□□ -0.18
CSGALNACT1-215ENST00000524112 UPF1Q92900 1129 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSGALNACT1-215ENST00000524112 TSPY4P0CV99 314 aa13.92□□□□□ -0.18
CSGALNACT1-215ENST00000524112 TSPY10P0CW01 314 aa13.92□□□□□ -0.18
CSGALNACT1-215ENST00000524112 KCNA6P17658 529 aa13.92□□□□□ -0.18
CSGALNACT1-215ENST00000524112 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
CSGALNACT1-215ENST00000524112 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
CSGALNACT1-215ENST00000524112 MSH6P52701 1360 aa13.91□□□□□ -0.18
CSGALNACT1-215ENST00000524112 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.18
CSGALNACT1-215ENST00000524112 NCOA2Q15596 1464 aa13.89□□□□□ -0.19
CSGALNACT1-215ENST00000524112 TMEM94Q12767 1356 aa13.89□□□□□ -0.19
CSGALNACT1-215ENST00000524112 TXNDC2Q86VQ3 553 aa13.89□□□□□ -0.19
CSGALNACT1-215ENST00000524112 NWD1Q149M9 1564 aa13.88□□□□□ -0.19
CSGALNACT1-215ENST00000524112 MAST1Q9Y2H9 1570 aa13.88□□□□□ -0.19
CSGALNACT1-215ENST00000524112 PHLPP1O60346 1717 aa13.88□□□□□ -0.19
CSGALNACT1-215ENST00000524112 TMEM2Q9UHN6 1383 aa13.87□□□□□ -0.19
CSGALNACT1-215ENST00000524112 MAP3K1Q13233 1512 aa13.86□□□□□ -0.19
CSGALNACT1-215ENST00000524112 SETD1AO15047 1707 aaKnown RBP13.86□□□□□ -0.19
CSGALNACT1-215ENST00000524112 SHPRHQ149N8 1683 aa13.85□□□□□ -0.19
CSGALNACT1-215ENST00000524112 RXRBP28702 533 aa13.85□□□□□ -0.19
CSGALNACT1-215ENST00000524112 SLAIN2Q9P270 581 aa13.85□□□□□ -0.19
CSGALNACT1-215ENST00000524112 SRCAPQ6ZRS2 3230 aa13.84□□□□□ -0.19
CSGALNACT1-215ENST00000524112 HDGFP51858 240 aaKnown RBP13.83□□□□□ -0.2
CSGALNACT1-215ENST00000524112 COL16A1Q07092 1604 aaPredicted RBP13.82□□□□□ -0.2
CSGALNACT1-215ENST00000524112 AHDC1Q5TGY3 1603 aaPredicted RBP13.82□□□□□ -0.2
CSGALNACT1-215ENST00000524112 EFCAB6Q5THR3 1501 aa13.82□□□□□ -0.2
CSGALNACT1-215ENST00000524112 LTKP29376 864 aa13.82□□□□□ -0.2
CSGALNACT1-215ENST00000524112 PROSER2Q86WR7 435 aaPredicted RBP13.82□□□□□ -0.2
CSGALNACT1-215ENST00000524112 TET3O43151 1660 aa13.82□□□□□ -0.2
CSGALNACT1-215ENST00000524112 DUOX2Q9NRD8 1548 aa13.81□□□□□ -0.2
CSGALNACT1-215ENST00000524112 MEX3CQ5U5Q3 659 aaKnown RBP13.8□□□□□ -0.2
CSGALNACT1-215ENST00000524112 CADPS2Q86UW7 1296 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms