RNA–Protein interactions for RNA: ENST00000524089.1

CDH15-203, Transcript of cadherin 15, humanhuman

TSL 2

Gene CDH15, Length 1,587 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15-203ENST00000524089 DEPDC5O75140 1603 aa24.19■■□□□ 1.46
CDH15-203ENST00000524089 DHX29Q7Z478 1369 aaKnown RBP24.19■■□□□ 1.46
CDH15-203ENST00000524089 CENPBP07199 599 aaPredicted RBP24.16■■□□□ 1.46
CDH15-203ENST00000524089 ACIN1Q9UKV3 1341 aaKnown RBP24.16■■□□□ 1.46
CDH15-203ENST00000524089 ATP10AO60312 1499 aa24.16■■□□□ 1.46
CDH15-203ENST00000524089 RNF17Q9BXT8 1623 aaKnown RBP24.14■■□□□ 1.46
CDH15-203ENST00000524089 SIGLEC1Q9BZZ2 1709 aa24.13■■□□□ 1.45
CDH15-203ENST00000524089 KDM5DQ9BY66 1539 aa24.13■■□□□ 1.45
CDH15-203ENST00000524089 SCAF1Q9H7N4 1312 aaKnown RBP24.11■■□□□ 1.45
CDH15-203ENST00000524089 IQGAP3Q86VI3 1631 aa24.1■■□□□ 1.45
CDH15-203ENST00000524089 MROH1Q8NDA8 1641 aa24.1■■□□□ 1.45
CDH15-203ENST00000524089 TRIM52Q96A61 297 aa24.1■■□□□ 1.45
CDH15-203ENST00000524089 PRDM15P57071 1507 aaPredicted RBP24.09■■□□□ 1.45
CDH15-203ENST00000524089 AGLP35573 1532 aa24.07■■□□□ 1.44
CDH15-203ENST00000524089 KIF3BO15066 747 aa24.06■■□□□ 1.44
CDH15-203ENST00000524089 PZPP20742 1482 aa24.06■■□□□ 1.44
CDH15-203ENST00000524089 NUP155O75694 1391 aa24.04■■□□□ 1.44
CDH15-203ENST00000524089 CEP152O94986 1710 aa24.04■■□□□ 1.44
CDH15-203ENST00000524089 FAM135AQ9P2D6 1515 aa24.04■■□□□ 1.44
CDH15-203ENST00000524089 VWDEQ8N2E2 1590 aa24.03■■□□□ 1.44
CDH15-203ENST00000524089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24■■□□□ 1.43
CDH15-203ENST00000524089 TET3O43151 1660 aa24■■□□□ 1.43
CDH15-203ENST00000524089 ZC3H13Q5T200 1668 aaKnown RBP24■■□□□ 1.43
CDH15-203ENST00000524089 MPHOSPH9Q99550 1183 aa23.98■■□□□ 1.43
CDH15-203ENST00000524089 KANK1Q14678 1352 aa23.98■■□□□ 1.43
CDH15-203ENST00000524089 PELP1Q8IZL8 1130 aaKnown RBP23.97■■□□□ 1.43
CDH15-203ENST00000524089 SLC4A1APQ9BWU0 796 aaKnown RBP23.97■■□□□ 1.43
CDH15-203ENST00000524089 E9PCH4 1651 aa23.95■■□□□ 1.42
CDH15-203ENST00000524089 NEUROD1Q13562 356 aa23.94■■□□□ 1.42
CDH15-203ENST00000524089 GGT6Q6P531 493 aa23.94■■□□□ 1.42
CDH15-203ENST00000524089 CAMSAP1Q5T5Y3 1602 aa23.93■■□□□ 1.42
CDH15-203ENST00000524089 LMTK2Q8IWU2 1503 aa23.93■■□□□ 1.42
CDH15-203ENST00000524089 ABCC3O15438 1527 aa23.93■■□□□ 1.42
CDH15-203ENST00000524089 EFCAB6Q5THR3 1501 aa23.91■■□□□ 1.42
CDH15-203ENST00000524089 CFAP65Q6ZU64 1925 aaKnown RBP23.9■■□□□ 1.42
CDH15-203ENST00000524089 CLTCQ00610 1675 aaKnown RBP23.9■■□□□ 1.42
CDH15-203ENST00000524089 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
CDH15-203ENST00000524089 SPHKAPQ2M3C7 1700 aa23.87■■□□□ 1.41
CDH15-203ENST00000524089 PKD2Q13563 968 aa23.87■■□□□ 1.41
CDH15-203ENST00000524089 FER1L4A9Z1Z3 1794 aa23.86■■□□□ 1.41
CDH15-203ENST00000524089 FOXD1Q16676 465 aa23.85■■□□□ 1.41
CDH15-203ENST00000524089 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
CDH15-203ENST00000524089 MLECQ14165 292 aa23.83■■□□□ 1.41
CDH15-203ENST00000524089 PPP6R1Q9UPN7 881 aa23.82■■□□□ 1.4
CDH15-203ENST00000524089 MROH2AA6NES4 1674 aa23.81■■□□□ 1.4
CDH15-203ENST00000524089 TIMELESSQ9UNS1 1208 aa23.81■■□□□ 1.4
CDH15-203ENST00000524089 RPRD2Q5VT52 1461 aaKnown RBP23.8■■□□□ 1.4
CDH15-203ENST00000524089 ANKRD30BQ9BXX2 1392 aa23.8■■□□□ 1.4
CDH15-203ENST00000524089 MIER1Q8N108 512 aa23.78■■□□□ 1.4
CDH15-203ENST00000524089 PREX1Q8TCU6 1659 aa23.77■■□□□ 1.4
CDH15-203ENST00000524089 NPATQ14207 1427 aa23.77■■□□□ 1.4
CDH15-203ENST00000524089 ARHGAP31Q2M1Z3 1444 aa23.76■■□□□ 1.39
CDH15-203ENST00000524089 TRPM2O94759 1503 aa23.75■■□□□ 1.39
CDH15-203ENST00000524089 ADAMTSL3P82987 1691 aa23.74■■□□□ 1.39
CDH15-203ENST00000524089 MADDQ8WXG6 1647 aa23.74■■□□□ 1.39
CDH15-203ENST00000524089 CNTLNQ9NXG0 1405 aa23.74■■□□□ 1.39
CDH15-203ENST00000524089 PLA2R1Q13018 1463 aa23.73■■□□□ 1.39
CDH15-203ENST00000524089 ESF1Q9H501 851 aaKnown RBP23.73■■□□□ 1.39
CDH15-203ENST00000524089 PTPRTO14522 1441 aa23.72■■□□□ 1.39
CDH15-203ENST00000524089 SIN3AQ96ST3 1273 aa23.72■■□□□ 1.39
CDH15-203ENST00000524089 C3P01024 1663 aa23.71■■□□□ 1.39
CDH15-203ENST00000524089 RIMS1Q86UR5 1692 aaKnown RBP23.71■■□□□ 1.39
CDH15-203ENST00000524089 CLTCL1P53675 1640 aa23.7■■□□□ 1.38
CDH15-203ENST00000524089 KIF1BO60333 1816 aa23.7■■□□□ 1.38
CDH15-203ENST00000524089 GTF3C3Q9Y5Q9 886 aa23.68■■□□□ 1.38
CDH15-203ENST00000524089 CCDC144AA2RUR9 1427 aa23.68■■□□□ 1.38
CDH15-203ENST00000524089 SYNMO15061 1565 aa23.68■■□□□ 1.38
CDH15-203ENST00000524089 NOS1P29475 1434 aa23.66■■□□□ 1.38
CDH15-203ENST00000524089 PIK3C2BO00750 1634 aa23.65■■□□□ 1.38
CDH15-203ENST00000524089 ZMYM3Q14202 1370 aa23.65■■□□□ 1.38
CDH15-203ENST00000524089 ERVK-7P63135 1459 aa23.64■■□□□ 1.38
CDH15-203ENST00000524089 SPATA31D1Q6ZQQ2 1576 aa23.64■■□□□ 1.38
CDH15-203ENST00000524089 UGGT1Q9NYU2 1555 aa23.64■■□□□ 1.37
CDH15-203ENST00000524089 MYO5BQ9ULV0 1848 aa23.59■■□□□ 1.37
CDH15-203ENST00000524089 TONSLQ96HA7 1378 aa23.59■■□□□ 1.37
CDH15-203ENST00000524089 FBXO31Q5XUX0 539 aaPredicted RBP23.57■■□□□ 1.36
CDH15-203ENST00000524089 NEURL4Q96JN8 1562 aa23.56■■□□□ 1.36
CDH15-203ENST00000524089 ADGRB3O60242 1522 aa23.53■■□□□ 1.36
CDH15-203ENST00000524089 SPATA31E1Q6ZUB1 1445 aa23.52■■□□□ 1.36
CDH15-203ENST00000524089 IFT172Q9UG01 1749 aa23.51■■□□□ 1.35
CDH15-203ENST00000524089 TMEM131LA2VDJ0 1609 aa23.5■■□□□ 1.35
CDH15-203ENST00000524089 SETD1BQ9UPS6 1966 aaKnown RBP23.5■■□□□ 1.35
CDH15-203ENST00000524089 CEBPAP49715 358 aaPredicted RBP23.49■■□□□ 1.35
CDH15-203ENST00000524089 SLC52A1Q9NWF4 448 aa23.49■■□□□ 1.35
CDH15-203ENST00000524089 TNRQ92752 1358 aa23.49■■□□□ 1.35
CDH15-203ENST00000524089 KDM5AP29375 1690 aaKnown RBP23.48■■□□□ 1.35
CDH15-203ENST00000524089 MYO3AQ8NEV4 1616 aa23.48■■□□□ 1.35
CDH15-203ENST00000524089 PPLO60437 1756 aa23.47■■□□□ 1.35
CDH15-203ENST00000524089 L3MBTL2Q969R5 705 aa23.47■■□□□ 1.35
CDH15-203ENST00000524089 YTHDC1Q96MU7 727 aaKnown RBP23.47■■□□□ 1.35
CDH15-203ENST00000524089 PTPRMP28827 1452 aa23.46■■□□□ 1.35
CDH15-203ENST00000524089 IDI1Q13907 227 aa23.45■■□□□ 1.34
CDH15-203ENST00000524089 UBR1Q8IWV7 1749 aa23.45■■□□□ 1.34
CDH15-203ENST00000524089 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
CDH15-203ENST00000524089 NLRP1Q9C000 1473 aa23.43■■□□□ 1.34
CDH15-203ENST00000524089 RGL3Q3MIN7 710 aa23.43■■□□□ 1.34
CDH15-203ENST00000524089 CHGAP10645 457 aaKnown RBP23.41■■□□□ 1.34
CDH15-203ENST00000524089 ZNF142P52746 1687 aaPredicted RBP23.4■■□□□ 1.34
CDH15-203ENST00000524089 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
CDH15-203ENST00000524089 AEBP2Q6ZN18 517 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms