RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 ILDR2Q71H61 639 aa13.93□□□□□ -0.18
CTNNA1-240ENST00000523912 ARHGEF5Q12774 1597 aa13.92□□□□□ -0.18
CTNNA1-240ENST00000523912 SPATA31D1Q6ZQQ2 1576 aa13.91□□□□□ -0.18
CTNNA1-240ENST00000523912 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.18
CTNNA1-240ENST00000523912 MYOM3Q5VTT5 1437 aa13.9□□□□□ -0.18
CTNNA1-240ENST00000523912 MIA2Q96PC5 1412 aa13.9□□□□□ -0.18
CTNNA1-240ENST00000523912 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.18
CTNNA1-240ENST00000523912 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
CTNNA1-240ENST00000523912 CEP170BQ9Y4F5 1589 aaPredicted RBP13.9□□□□□ -0.18
CTNNA1-240ENST00000523912 CLTCQ00610 1675 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-240ENST00000523912 KIF3BO15066 747 aa13.89□□□□□ -0.19
CTNNA1-240ENST00000523912 ZNF335Q9H4Z2 1342 aaPredicted RBP13.89□□□□□ -0.19
CTNNA1-240ENST00000523912 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
CTNNA1-240ENST00000523912 KANK4Q5T7N3 995 aaPredicted RBP13.88□□□□□ -0.19
CTNNA1-240ENST00000523912 KDM5DQ9BY66 1539 aa13.87□□□□□ -0.19
CTNNA1-240ENST00000523912 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
CTNNA1-240ENST00000523912 UBAP1LF5GYI3 381 aa13.85□□□□□ -0.19
CTNNA1-240ENST00000523912 MAST1Q9Y2H9 1570 aa13.84□□□□□ -0.19
CTNNA1-240ENST00000523912 DNMT1P26358 1616 aaKnown RBP13.83□□□□□ -0.2
CTNNA1-240ENST00000523912 PZPP20742 1482 aa13.83□□□□□ -0.2
CTNNA1-240ENST00000523912 TNRQ92752 1358 aa13.83□□□□□ -0.2
CTNNA1-240ENST00000523912 SHANK2Q9UPX8 1470 aa13.81□□□□□ -0.2
CTNNA1-240ENST00000523912 CPS1P31327 1500 aa13.81□□□□□ -0.2
CTNNA1-240ENST00000523912 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
CTNNA1-240ENST00000523912 TOM1O60784 492 aa13.79□□□□□ -0.2
CTNNA1-240ENST00000523912 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
CTNNA1-240ENST00000523912 THEMISQ8N1K5 641 aaPredicted RBP13.79□□□□□ -0.2
CTNNA1-240ENST00000523912 KIF15Q9NS87 1388 aa13.79□□□□□ -0.2
CTNNA1-240ENST00000523912 FGD6Q6ZV73 1430 aa13.79□□□□□ -0.2
CTNNA1-240ENST00000523912 DUOX2Q9NRD8 1548 aa13.79□□□□□ -0.2
CTNNA1-240ENST00000523912 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
CTNNA1-240ENST00000523912 RNF17Q9BXT8 1623 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-240ENST00000523912 MED14O60244 1454 aa13.77□□□□□ -0.21
CTNNA1-240ENST00000523912 FBXO31Q5XUX0 539 aaPredicted RBP13.77□□□□□ -0.21
CTNNA1-240ENST00000523912 NEURL4Q96JN8 1562 aa13.77□□□□□ -0.21
CTNNA1-240ENST00000523912 ERBINQ96RT1 1412 aa13.77□□□□□ -0.21
CTNNA1-240ENST00000523912 PTPN23Q9H3S7 1636 aa13.77□□□□□ -0.21
CTNNA1-240ENST00000523912 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
CTNNA1-240ENST00000523912 ABCC3O15438 1527 aa13.76□□□□□ -0.21
CTNNA1-240ENST00000523912 ABCC5O15440 1437 aa13.76□□□□□ -0.21
CTNNA1-240ENST00000523912 ZC3H13Q5T200 1668 aaKnown RBP13.75□□□□□ -0.21
CTNNA1-240ENST00000523912 DAPK1P53355 1430 aa13.75□□□□□ -0.21
CTNNA1-240ENST00000523912 DEPDC5O75140 1603 aa13.75□□□□□ -0.21
CTNNA1-240ENST00000523912 ANKRD30AQ9BXX3 1397 aa13.74□□□□□ -0.21
CTNNA1-240ENST00000523912 KANK1Q14678 1352 aa13.73□□□□□ -0.21
CTNNA1-240ENST00000523912 RRP7BPQ9NSQ0 103 aa13.73□□□□□ -0.21
CTNNA1-240ENST00000523912 UGGT1Q9NYU2 1555 aa13.73□□□□□ -0.21
CTNNA1-240ENST00000523912 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-240ENST00000523912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTNNA1-240ENST00000523912 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
CTNNA1-240ENST00000523912 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.21
CTNNA1-240ENST00000523912 HSPA1LP34931 641 aa13.71□□□□□ -0.21
CTNNA1-240ENST00000523912 ERVK-7P63135 1459 aa13.71□□□□□ -0.21
CTNNA1-240ENST00000523912 PRDM15P57071 1507 aaPredicted RBP13.7□□□□□ -0.22
CTNNA1-240ENST00000523912 FAM50AQ14320 339 aaKnown RBP13.7□□□□□ -0.22
CTNNA1-240ENST00000523912 MROH1Q8NDA8 1641 aa13.69□□□□□ -0.22
CTNNA1-240ENST00000523912 ARHGAP31Q2M1Z3 1444 aa13.68□□□□□ -0.22
CTNNA1-240ENST00000523912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.221e-7■□□□□ 8.2
CTNNA1-240ENST00000523912 CHIC2Q9UKJ5 165 aa13.68□□□□□ -0.22
CTNNA1-240ENST00000523912 MED1Q15648 1581 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-240ENST00000523912 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
CTNNA1-240ENST00000523912 SCAF1Q9H7N4 1312 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-240ENST00000523912 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
CTNNA1-240ENST00000523912 ADGRL2O95490 1459 aa13.65□□□□□ -0.22
CTNNA1-240ENST00000523912 ALKQ9UM73 1620 aa13.64□□□□□ -0.23
CTNNA1-240ENST00000523912 SYNMO15061 1565 aa13.64□□□□□ -0.23
CTNNA1-240ENST00000523912 CEP152O94986 1710 aa13.64□□□□□ -0.23
CTNNA1-240ENST00000523912 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
CTNNA1-240ENST00000523912 LMTK2Q8IWU2 1503 aa13.63□□□□□ -0.23
CTNNA1-240ENST00000523912 STAG3Q9UJ98 1225 aa13.62□□□□□ -0.23
CTNNA1-240ENST00000523912 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
CTNNA1-240ENST00000523912 ARHGAP23Q9P227 1491 aa13.61□□□□□ -0.23
CTNNA1-240ENST00000523912 SLIT1O75093 1534 aa13.61□□□□□ -0.23
CTNNA1-240ENST00000523912 EID1Q9Y6B2 187 aa13.61□□□□□ -0.23
CTNNA1-240ENST00000523912 SCAF11Q99590 1463 aaKnown RBP13.61□□□□□ -0.23
CTNNA1-240ENST00000523912 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
CTNNA1-240ENST00000523912 PHF23Q9BUL5 403 aaPredicted RBP13.58□□□□□ -0.24
CTNNA1-240ENST00000523912 EFCAB6Q5THR3 1501 aa13.58□□□□□ -0.24
CTNNA1-240ENST00000523912 STRCP1A6NGW2 1772 aa13.58□□□□□ -0.24
CTNNA1-240ENST00000523912 ROCK1Q13464 1354 aa13.58□□□□□ -0.24
CTNNA1-240ENST00000523912 TXNDC2Q86VQ3 553 aa13.57□□□□□ -0.24
CTNNA1-240ENST00000523912 RPRD2Q5VT52 1461 aaKnown RBP13.56□□□□□ -0.24
CTNNA1-240ENST00000523912 LTKP29376 864 aa13.56□□□□□ -0.24
CTNNA1-240ENST00000523912 TMEM2Q9UHN6 1383 aa13.56□□□□□ -0.24
CTNNA1-240ENST00000523912 SLC52A1Q9NWF4 448 aa13.55□□□□□ -0.24
CTNNA1-240ENST00000523912 KDM5AP29375 1690 aaKnown RBP13.55□□□□□ -0.24
CTNNA1-240ENST00000523912 NOS1P29475 1434 aa13.54□□□□□ -0.24
CTNNA1-240ENST00000523912 FAM135BQ49AJ0 1406 aa13.54□□□□□ -0.24
CTNNA1-240ENST00000523912 CFAP65Q6ZU64 1925 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-240ENST00000523912 IDI1Q13907 227 aa13.53□□□□□ -0.24
CTNNA1-240ENST00000523912 PIK3C2BO00750 1634 aa13.53□□□□□ -0.24
CTNNA1-240ENST00000523912 ADGRB3O60242 1522 aa13.52□□□□□ -0.25
CTNNA1-240ENST00000523912 KCNA6P17658 529 aa13.51□□□□□ -0.25
CTNNA1-240ENST00000523912 ITGAEP38570 1179 aa13.51□□□□□ -0.25
CTNNA1-240ENST00000523912 TET3O43151 1660 aa13.5□□□□□ -0.25
CTNNA1-240ENST00000523912 UNC13BO14795 1591 aa13.49□□□□□ -0.25
CTNNA1-240ENST00000523912 PPP1R15AO75807 674 aaPredicted RBP13.49□□□□□ -0.25
CTNNA1-240ENST00000523912 HDGFP51858 240 aaKnown RBP13.49□□□□□ -0.25
CTNNA1-240ENST00000523912 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
CTNNA1-240ENST00000523912 BCANQ96GW7 911 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms