RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, humanhuman

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-215ENST00000523799 TOM1O60784 492 aa14.1□□□□□ -0.15
CCNC-215ENST00000523799 SPDYE6P0CI01 402 aa14.1□□□□□ -0.15
CCNC-215ENST00000523799 SPDYE2Q495Y8 402 aa14.1□□□□□ -0.15
CCNC-215ENST00000523799 TCOF1Q13428 1488 aaKnown RBP14.09□□□□□ -0.15
CCNC-215ENST00000523799 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
CCNC-215ENST00000523799 MYO3AQ8NEV4 1616 aa14.08□□□□□ -0.16
CCNC-215ENST00000523799 PIP4K2BP78356 416 aa14.07□□□□□ -0.16
CCNC-215ENST00000523799 ZMYM3Q14202 1370 aa14.07□□□□□ -0.16
CCNC-215ENST00000523799 CDC42BPBQ9Y5S2 1711 aa14.06□□□□□ -0.16
CCNC-215ENST00000523799 KIDINS220Q9ULH0 1771 aa14.06□□□□□ -0.16
CCNC-215ENST00000523799 CPS1P31327 1500 aa14.05□□□□□ -0.16
CCNC-215ENST00000523799 CEP170BQ9Y4F5 1589 aaPredicted RBP14.05□□□□□ -0.16
CCNC-215ENST00000523799 CLIP1P30622 1438 aa14.04□□□□□ -0.16
CCNC-215ENST00000523799 TROQ12816 1431 aaPredicted RBP14.04□□□□□ -0.16
CCNC-215ENST00000523799 ITSN2Q9NZM3 1697 aa14.04□□□□□ -0.16
CCNC-215ENST00000523799 ABCC1P33527 1531 aa14.03□□□□□ -0.16
CCNC-215ENST00000523799 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.17
CCNC-215ENST00000523799 CLTCQ00610 1675 aaKnown RBP14.01□□□□□ -0.17
CCNC-215ENST00000523799 PTPRKQ15262 1439 aa14.01□□□□□ -0.17
CCNC-215ENST00000523799 FMN1Q68DA7 1419 aa14.01□□□□□ -0.17
CCNC-215ENST00000523799 ATP1B4Q9UN42 357 aaPredicted RBP14.01□□□□□ -0.17
CCNC-215ENST00000523799 PREX2Q70Z35 1606 aa14.01□□□□□ -0.17
CCNC-215ENST00000523799 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
CCNC-215ENST00000523799 POLR1AO95602 1720 aaPredicted RBP14□□□□□ -0.17
CCNC-215ENST00000523799 EEA1Q15075 1411 aa13.99□□□□□ -0.17
CCNC-215ENST00000523799 HAX1O00165 279 aa13.99□□□□□ -0.17
CCNC-215ENST00000523799 SHANK2Q9UPX8 1470 aa13.99□□□□□ -0.17
CCNC-215ENST00000523799 DNMT1P26358 1616 aaKnown RBP13.97□□□□□ -0.17
CCNC-215ENST00000523799 A2ML1A8K2U0 1454 aa13.96□□□□□ -0.17
CCNC-215ENST00000523799 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
CCNC-215ENST00000523799 SAMD9LQ8IVG5 1584 aa13.95□□□□□ -0.18
CCNC-215ENST00000523799 PLXNC1O60486 1568 aa13.93□□□□□ -0.18
CCNC-215ENST00000523799 NEURL4Q96JN8 1562 aa13.93□□□□□ -0.18
CCNC-215ENST00000523799 ALKQ9UM73 1620 aa13.93□□□□□ -0.18
CCNC-215ENST00000523799 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
CCNC-215ENST00000523799 LRRIQ1Q96JM4 1722 aa13.93□□□□□ -0.18
CCNC-215ENST00000523799 SPAG9O60271 1321 aaKnown RBP13.91□□□□□ -0.18
CCNC-215ENST00000523799 VWDEQ8N2E2 1590 aa13.91□□□□□ -0.18
CCNC-215ENST00000523799 A2MP01023 1474 aa13.9□□□□□ -0.18
CCNC-215ENST00000523799 ATP7AQ04656 1500 aa13.9□□□□□ -0.19
CCNC-215ENST00000523799 GGT6Q6P531 493 aa13.89□□□□□ -0.19
CCNC-215ENST00000523799 SPDYE1Q8NFV5 336 aaPredicted RBP13.89□□□□□ -0.19
CCNC-215ENST00000523799 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
CCNC-215ENST00000523799 ANKLE2Q86XL3 938 aa13.88□□□□□ -0.19
CCNC-215ENST00000523799 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
CCNC-215ENST00000523799 RNF17Q9BXT8 1623 aaKnown RBP13.87□□□□□ -0.19
CCNC-215ENST00000523799 SYCP2Q9BX26 1530 aa13.87□□□□□ -0.19
CCNC-215ENST00000523799 ADGBQ8N7X0 1667 aa13.87□□□□□ -0.19
CCNC-215ENST00000523799 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
CCNC-215ENST00000523799 DEPDC5O75140 1603 aa13.86□□□□□ -0.19
CCNC-215ENST00000523799 MED14O60244 1454 aa13.86□□□□□ -0.19
CCNC-215ENST00000523799 CCDC18Q5T9S5 1454 aa13.86□□□□□ -0.19
CCNC-215ENST00000523799 SYNMO15061 1565 aa13.85□□□□□ -0.19
CCNC-215ENST00000523799 TNRQ92752 1358 aa13.84□□□□□ -0.19
CCNC-215ENST00000523799 FKBP8Q14318 412 aa13.84□□□□□ -0.19
CCNC-215ENST00000523799 THEMISQ8N1K5 641 aaPredicted RBP13.84□□□□□ -0.19
CCNC-215ENST00000523799 ZNF777Q9ULD5 760 aaPredicted RBP13.84□□□□□ -0.19
CCNC-215ENST00000523799 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
CCNC-215ENST00000523799 NPHP4O75161 1426 aaPredicted RBP13.83□□□□□ -0.2
CCNC-215ENST00000523799 KIAA1107Q9UPP5 1409 aa13.83□□□□□ -0.2
CCNC-215ENST00000523799 IQGAP1P46940 1657 aa13.83□□□□□ -0.2
CCNC-215ENST00000523799 PLEKHH2Q8IVE3 1493 aa13.83□□□□□ -0.2
CCNC-215ENST00000523799 HNRNPMP52272 730 aaKnown RBP eCLIP13.83□□□□□ -0.28e-10■■■■□ 20.8
CCNC-215ENST00000523799 STRCP1A6NGW2 1772 aa13.82□□□□□ -0.2
CCNC-215ENST00000523799 LRRC7Q96NW7 1537 aa13.82□□□□□ -0.2
CCNC-215ENST00000523799 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCNC-215ENST00000523799 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
CCNC-215ENST00000523799 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
CCNC-215ENST00000523799 UBTFP17480 764 aaKnown RBP13.8□□□□□ -0.2
CCNC-215ENST00000523799 PZPP20742 1482 aa13.8□□□□□ -0.2
CCNC-215ENST00000523799 UGGT1Q9NYU2 1555 aa13.79□□□□□ -0.2
CCNC-215ENST00000523799 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
CCNC-215ENST00000523799 GPATCH8Q9UKJ3 1502 aaKnown RBP13.79□□□□□ -0.2
CCNC-215ENST00000523799 POTEAQ6S8J7 498 aa13.78□□□□□ -0.2
CCNC-215ENST00000523799 PROM2Q8N271 834 aa13.78□□□□□ -0.2
CCNC-215ENST00000523799 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
CCNC-215ENST00000523799 FBXO31Q5XUX0 539 aaPredicted RBP13.77□□□□□ -0.21
CCNC-215ENST00000523799 KDM5DQ9BY66 1539 aa13.76□□□□□ -0.21
CCNC-215ENST00000523799 MIA2Q96PC5 1412 aa13.76□□□□□ -0.21
CCNC-215ENST00000523799 CFDP1Q9UEE9 299 aaPredicted RBP13.75□□□□□ -0.21
CCNC-215ENST00000523799 DHX29Q7Z478 1369 aaKnown RBP13.74□□□□□ -0.21
CCNC-215ENST00000523799 RTEL1-TNFRSF6BF6WH68 1400 aa13.73□□□□□ -0.21
CCNC-215ENST00000523799 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
CCNC-215ENST00000523799 EVX2Q03828 476 aa13.73□□□□□ -0.21
CCNC-215ENST00000523799 SRCAPQ6ZRS2 3230 aa13.73□□□□□ -0.21
CCNC-215ENST00000523799 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
CCNC-215ENST00000523799 ZC3H13Q5T200 1668 aaKnown RBP13.72□□□□□ -0.21
CCNC-215ENST00000523799 WASHC2CQ9Y4E1 1318 aa13.72□□□□□ -0.21
CCNC-215ENST00000523799 XIRP1Q702N8 1843 aaKnown RBP13.72□□□□□ -0.21
CCNC-215ENST00000523799 CCNB3Q8WWL7 1395 aa13.71□□□□□ -0.22
CCNC-215ENST00000523799 FYCO1Q9BQS8 1478 aa13.7□□□□□ -0.22
CCNC-215ENST00000523799 KIF3BO15066 747 aa13.7□□□□□ -0.22
CCNC-215ENST00000523799 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
CCNC-215ENST00000523799 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
CCNC-215ENST00000523799 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCNC-215ENST00000523799 SCAF11Q99590 1463 aaKnown RBP13.65□□□□□ -0.22
CCNC-215ENST00000523799 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
CCNC-215ENST00000523799 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
CCNC-215ENST00000523799 LRRC9Q6ZRR7 1453 aa13.62□□□□□ -0.23
CCNC-215ENST00000523799 ZNF644Q9H582 1327 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms