RNA–Protein interactions for RNA: ENST00000523720.1

R3HCC1-209, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-209ENST00000523720 ZMYM3Q14202 1370 aa18.5■□□□□ 0.55
R3HCC1-209ENST00000523720 GGT6Q6P531 493 aa18.49■□□□□ 0.55
R3HCC1-209ENST00000523720 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
R3HCC1-209ENST00000523720 FGD6Q6ZV73 1430 aa18.49■□□□□ 0.55
R3HCC1-209ENST00000523720 TCOF1Q13428 1488 aaKnown RBP18.48■□□□□ 0.55
R3HCC1-209ENST00000523720 CEP170BQ9Y4F5 1589 aaPredicted RBP18.47■□□□□ 0.55
R3HCC1-209ENST00000523720 DUOX2Q9NRD8 1548 aa18.47■□□□□ 0.55
R3HCC1-209ENST00000523720 PTPRKQ15262 1439 aa18.46■□□□□ 0.55
R3HCC1-209ENST00000523720 KIF3BO15066 747 aa18.44■□□□□ 0.54
R3HCC1-209ENST00000523720 CEP152O94986 1710 aa18.43■□□□□ 0.54
R3HCC1-209ENST00000523720 DAPK1P53355 1430 aa18.43■□□□□ 0.54
R3HCC1-209ENST00000523720 CAMSAP1Q5T5Y3 1602 aa18.43■□□□□ 0.54
R3HCC1-209ENST00000523720 MROH1Q8NDA8 1641 aa18.43■□□□□ 0.54
R3HCC1-209ENST00000523720 PZPP20742 1482 aa18.43■□□□□ 0.54
R3HCC1-209ENST00000523720 ABCC5O15440 1437 aa18.41■□□□□ 0.54
R3HCC1-209ENST00000523720 NCOA1Q15788 1441 aa18.41■□□□□ 0.54
R3HCC1-209ENST00000523720 PRDM15P57071 1507 aaPredicted RBP18.41■□□□□ 0.54
R3HCC1-209ENST00000523720 ERBINQ96RT1 1412 aa18.4■□□□□ 0.54
R3HCC1-209ENST00000523720 ABCC3O15438 1527 aa18.4■□□□□ 0.54
R3HCC1-209ENST00000523720 DEPDC5O75140 1603 aa18.39■□□□□ 0.53
R3HCC1-209ENST00000523720 ILDR1Q86SU0 546 aaPredicted RBP18.39■□□□□ 0.53
R3HCC1-209ENST00000523720 POLR1AO95602 1720 aaPredicted RBP18.39■□□□□ 0.53
R3HCC1-209ENST00000523720 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
R3HCC1-209ENST00000523720 PLA2R1Q13018 1463 aa18.38■□□□□ 0.53
R3HCC1-209ENST00000523720 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
R3HCC1-209ENST00000523720 PTPRTO14522 1441 aa18.37■□□□□ 0.53
R3HCC1-209ENST00000523720 A2ML1A8K2U0 1454 aa18.37■□□□□ 0.53
R3HCC1-209ENST00000523720 WASHC2CQ9Y4E1 1318 aa18.36■□□□□ 0.53
R3HCC1-209ENST00000523720 TNRQ92752 1358 aa18.34■□□□□ 0.53
R3HCC1-209ENST00000523720 SPATA31D1Q6ZQQ2 1576 aa18.34■□□□□ 0.53
R3HCC1-209ENST00000523720 ADGRL2O95490 1459 aa18.33■□□□□ 0.52
R3HCC1-209ENST00000523720 NLRP1Q9C000 1473 aa18.33■□□□□ 0.52
R3HCC1-209ENST00000523720 ANKRD30AQ9BXX3 1397 aa18.32■□□□□ 0.52
R3HCC1-209ENST00000523720 FBXO41Q8TF61 875 aa18.3■□□□□ 0.52
R3HCC1-209ENST00000523720 ERVK-7P63135 1459 aa18.29■□□□□ 0.52
R3HCC1-209ENST00000523720 CFAP65Q6ZU64 1925 aaKnown RBP18.28■□□□□ 0.52
R3HCC1-209ENST00000523720 UGGT1Q9NYU2 1555 aa18.27■□□□□ 0.52
R3HCC1-209ENST00000523720 RRP7BPQ9NSQ0 103 aa18.27■□□□□ 0.52
R3HCC1-209ENST00000523720 FAM50AQ14320 339 aaKnown RBP18.26■□□□□ 0.51
R3HCC1-209ENST00000523720 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
R3HCC1-209ENST00000523720 KANK1Q14678 1352 aa18.25■□□□□ 0.51
R3HCC1-209ENST00000523720 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
R3HCC1-209ENST00000523720 LMTK2Q8IWU2 1503 aa18.24■□□□□ 0.51
R3HCC1-209ENST00000523720 UBR1Q8IWV7 1749 aa18.24■□□□□ 0.51
R3HCC1-209ENST00000523720 PKD2Q13563 968 aa18.24■□□□□ 0.51
R3HCC1-209ENST00000523720 FBXO31Q5XUX0 539 aaPredicted RBP18.24■□□□□ 0.51
R3HCC1-209ENST00000523720 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
R3HCC1-209ENST00000523720 ARHGAP31Q2M1Z3 1444 aa18.23■□□□□ 0.51
R3HCC1-209ENST00000523720 LTBP4Q8N2S1 1624 aa18.23■□□□□ 0.51
R3HCC1-209ENST00000523720 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
R3HCC1-209ENST00000523720 CHIC2Q9UKJ5 165 aa18.22■□□□□ 0.51
R3HCC1-209ENST00000523720 UNC13BO14795 1591 aa18.21■□□□□ 0.51
R3HCC1-209ENST00000523720 IQSEC2Q5JU85 1478 aa18.21■□□□□ 0.51
R3HCC1-209ENST00000523720 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
R3HCC1-209ENST00000523720 IQGAP1P46940 1657 aa18.2■□□□□ 0.5
R3HCC1-209ENST00000523720 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
R3HCC1-209ENST00000523720 TET3O43151 1660 aa18.19■□□□□ 0.5
R3HCC1-209ENST00000523720 KDM5AP29375 1690 aaKnown RBP18.19■□□□□ 0.5
R3HCC1-209ENST00000523720 ANKRD50Q9ULJ7 1429 aa18.19■□□□□ 0.5
R3HCC1-209ENST00000523720 PIK3C2BO00750 1634 aa18.17■□□□□ 0.5
R3HCC1-209ENST00000523720 ROCK1Q13464 1354 aa18.17■□□□□ 0.5
R3HCC1-209ENST00000523720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.16■□□□□ 0.5
R3HCC1-209ENST00000523720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.16■□□□□ 0.5
R3HCC1-209ENST00000523720 THEMISQ8N1K5 641 aaPredicted RBP18.15■□□□□ 0.5
R3HCC1-209ENST00000523720 SYNMO15061 1565 aa18.14■□□□□ 0.49
R3HCC1-209ENST00000523720 MED14O60244 1454 aa18.14■□□□□ 0.49
R3HCC1-209ENST00000523720 RPRD2Q5VT52 1461 aaKnown RBP18.14■□□□□ 0.49
R3HCC1-209ENST00000523720 IQGAP3Q86VI3 1631 aa18.13■□□□□ 0.49
R3HCC1-209ENST00000523720 NPHP4O75161 1426 aaPredicted RBP18.12■□□□□ 0.49
R3HCC1-209ENST00000523720 ANKLE2Q86XL3 938 aa18.11■□□□□ 0.49
R3HCC1-209ENST00000523720 ZNF335Q9H4Z2 1342 aaPredicted RBP18.11■□□□□ 0.49
R3HCC1-209ENST00000523720 ADGRB3O60242 1522 aa18.11■□□□□ 0.49
R3HCC1-209ENST00000523720 SLIT1O75093 1534 aa18.11■□□□□ 0.49
R3HCC1-209ENST00000523720 CPS1P31327 1500 aa18.11■□□□□ 0.49
R3HCC1-209ENST00000523720 SCAF11Q99590 1463 aaKnown RBP18.09■□□□□ 0.49
R3HCC1-209ENST00000523720 E9PCH4 1651 aa18.09■□□□□ 0.49
R3HCC1-209ENST00000523720 ARHGAP23Q9P227 1491 aa18.08■□□□□ 0.49
R3HCC1-209ENST00000523720 RRBP1Q9P2E9 1410 aaKnown RBP18.08■□□□□ 0.49
R3HCC1-209ENST00000523720 NOS1P29475 1434 aa18.07■□□□□ 0.48
R3HCC1-209ENST00000523720 PPARGC1BQ86YN6 1023 aaKnown RBP18.07■□□□□ 0.48
R3HCC1-209ENST00000523720 MYO5BQ9ULV0 1848 aa18.05■□□□□ 0.48
R3HCC1-209ENST00000523720 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.48
R3HCC1-209ENST00000523720 ITGAEP38570 1179 aa18.02■□□□□ 0.48
R3HCC1-209ENST00000523720 STAG3Q9UJ98 1225 aa18.01■□□□□ 0.47
R3HCC1-209ENST00000523720 TMEM2Q9UHN6 1383 aa18.01■□□□□ 0.47
R3HCC1-209ENST00000523720 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
R3HCC1-209ENST00000523720 TMEM131LA2VDJ0 1609 aa17.99■□□□□ 0.47
R3HCC1-209ENST00000523720 EID1Q9Y6B2 187 aa17.98■□□□□ 0.47
R3HCC1-209ENST00000523720 SLC52A1Q9NWF4 448 aa17.97■□□□□ 0.47
R3HCC1-209ENST00000523720 NUP155O75694 1391 aa17.95■□□□□ 0.46
R3HCC1-209ENST00000523720 IDI1Q13907 227 aa17.95■□□□□ 0.46
R3HCC1-209ENST00000523720 TXNDC2Q86VQ3 553 aa17.95■□□□□ 0.46
R3HCC1-209ENST00000523720 NAIPQ13075 1403 aa17.92■□□□□ 0.46
R3HCC1-209ENST00000523720 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
R3HCC1-209ENST00000523720 LTKP29376 864 aa17.92■□□□□ 0.46
R3HCC1-209ENST00000523720 NWD1Q149M9 1564 aa17.91■□□□□ 0.46
R3HCC1-209ENST00000523720 XIRP1Q702N8 1843 aaKnown RBP17.91■□□□□ 0.46
R3HCC1-209ENST00000523720 LRRC7Q96NW7 1537 aa17.91■□□□□ 0.46
R3HCC1-209ENST00000523720 HFM1A2PYH4 1435 aa17.9■□□□□ 0.46
R3HCC1-209ENST00000523720 ZFYVE9O95405 1425 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms