RNA–Protein interactions for RNA: ENST00000523530.1

DENND3-222, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 1,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-222ENST00000523530 DIP2CQ9Y2E4 1556 aa23.44■■□□□ 1.34
DENND3-222ENST00000523530 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
DENND3-222ENST00000523530 MAGI2Q86UL8 1455 aa23.43■■□□□ 1.34
DENND3-222ENST00000523530 FAM135AQ9P2D6 1515 aa23.43■■□□□ 1.34
DENND3-222ENST00000523530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.42■■□□□ 1.34
DENND3-222ENST00000523530 SIN3AQ96ST3 1273 aa23.4■■□□□ 1.34
DENND3-222ENST00000523530 NEUROD1Q13562 356 aa23.4■■□□□ 1.34
DENND3-222ENST00000523530 FOXD1Q16676 465 aa23.38■■□□□ 1.33
DENND3-222ENST00000523530 BCORL1Q5H9F3 1711 aa23.37■■□□□ 1.33
DENND3-222ENST00000523530 KIF3BO15066 747 aa23.37■■□□□ 1.33
DENND3-222ENST00000523530 PKD2Q13563 968 aa23.37■■□□□ 1.33
DENND3-222ENST00000523530 YEATS2Q9ULM3 1422 aa23.37■■□□□ 1.33
DENND3-222ENST00000523530 RNF17Q9BXT8 1623 aaKnown RBP23.36■■□□□ 1.33
DENND3-222ENST00000523530 KANK1Q14678 1352 aa23.35■■□□□ 1.33
DENND3-222ENST00000523530 COL17A1Q9UMD9 1497 aaPredicted RBP23.34■■□□□ 1.33
DENND3-222ENST00000523530 PRDM15P57071 1507 aaPredicted RBP23.34■■□□□ 1.33
DENND3-222ENST00000523530 ANKRD30BQ9BXX2 1392 aa23.33■■□□□ 1.33
DENND3-222ENST00000523530 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
DENND3-222ENST00000523530 VWDEQ8N2E2 1590 aa23.3■■□□□ 1.32
DENND3-222ENST00000523530 ATP10AO60312 1499 aa23.29■■□□□ 1.32
DENND3-222ENST00000523530 TET3O43151 1660 aa23.29■■□□□ 1.32
DENND3-222ENST00000523530 TIMELESSQ9UNS1 1208 aa23.29■■□□□ 1.32
DENND3-222ENST00000523530 ARHGEF40Q8TER5 1519 aa23.29■■□□□ 1.32
DENND3-222ENST00000523530 TONSLQ96HA7 1378 aa23.29■■□□□ 1.32
DENND3-222ENST00000523530 REREQ9P2R6 1566 aa23.28■■□□□ 1.32
DENND3-222ENST00000523530 CEP152O94986 1710 aa23.27■■□□□ 1.32
DENND3-222ENST00000523530 E9PCH4 1651 aa23.26■■□□□ 1.31
DENND3-222ENST00000523530 RPRD2Q5VT52 1461 aaKnown RBP23.25■■□□□ 1.31
DENND3-222ENST00000523530 GGT6Q6P531 493 aa23.23■■□□□ 1.31
DENND3-222ENST00000523530 LMTK2Q8IWU2 1503 aa23.2■■□□□ 1.3
DENND3-222ENST00000523530 AGLP35573 1532 aa23.19■■□□□ 1.3
DENND3-222ENST00000523530 ZC3H13Q5T200 1668 aaKnown RBP23.19■■□□□ 1.3
DENND3-222ENST00000523530 EFCAB6Q5THR3 1501 aa23.19■■□□□ 1.3
DENND3-222ENST00000523530 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
DENND3-222ENST00000523530 SIGLEC1Q9BZZ2 1709 aa23.16■■□□□ 1.3
DENND3-222ENST00000523530 ABCC3O15438 1527 aa23.15■■□□□ 1.3
DENND3-222ENST00000523530 CAMSAP1Q5T5Y3 1602 aa23.15■■□□□ 1.3
DENND3-222ENST00000523530 CCDC144AA2RUR9 1427 aa23.15■■□□□ 1.3
DENND3-222ENST00000523530 WASHC2CQ9Y4E1 1318 aa23.14■■□□□ 1.3
DENND3-222ENST00000523530 PLA2R1Q13018 1463 aa23.13■■□□□ 1.29
DENND3-222ENST00000523530 TRPM2O94759 1503 aa23.12■■□□□ 1.29
DENND3-222ENST00000523530 PPP1R15AO75807 674 aaPredicted RBP23.11■■□□□ 1.29
DENND3-222ENST00000523530 L3MBTL2Q969R5 705 aa23.08■■□□□ 1.29
DENND3-222ENST00000523530 PTPRTO14522 1441 aa23.08■■□□□ 1.28
DENND3-222ENST00000523530 CLTCQ00610 1675 aaKnown RBP23.05■■□□□ 1.28
DENND3-222ENST00000523530 CFAP65Q6ZU64 1925 aaKnown RBP23.05■■□□□ 1.28
DENND3-222ENST00000523530 CLTCL1P53675 1640 aa23.05■■□□□ 1.28
DENND3-222ENST00000523530 NPATQ14207 1427 aa23.04■■□□□ 1.28
DENND3-222ENST00000523530 PPP6R1Q9UPN7 881 aa23.04■■□□□ 1.28
DENND3-222ENST00000523530 ARID4BQ4LE39 1312 aaPredicted RBP23.03■■□□□ 1.28
DENND3-222ENST00000523530 MLECQ14165 292 aa23.02■■□□□ 1.28
DENND3-222ENST00000523530 ARHGAP31Q2M1Z3 1444 aa23.01■■□□□ 1.27
DENND3-222ENST00000523530 KIF1BO60333 1816 aa23■■□□□ 1.27
DENND3-222ENST00000523530 CNTLNQ9NXG0 1405 aa22.98■■□□□ 1.27
DENND3-222ENST00000523530 PREX1Q8TCU6 1659 aa22.98■■□□□ 1.27
DENND3-222ENST00000523530 ESF1Q9H501 851 aaKnown RBP22.97■■□□□ 1.27
DENND3-222ENST00000523530 UGGT1Q9NYU2 1555 aa22.96■■□□□ 1.27
DENND3-222ENST00000523530 ZNF316A6NFI3 1004 aaPredicted RBP22.94■■□□□ 1.26
DENND3-222ENST00000523530 RGL3Q3MIN7 710 aa22.94■■□□□ 1.26
DENND3-222ENST00000523530 NOS1P29475 1434 aa22.93■■□□□ 1.26
DENND3-222ENST00000523530 DCAF11Q8TEB1 546 aa22.93■■□□□ 1.26
DENND3-222ENST00000523530 SPATA31E1Q6ZUB1 1445 aa22.92■■□□□ 1.26
DENND3-222ENST00000523530 SYNMO15061 1565 aa22.92■■□□□ 1.26
DENND3-222ENST00000523530 NEURL4Q96JN8 1562 aa22.92■■□□□ 1.26
DENND3-222ENST00000523530 MROH2AA6NES4 1674 aa22.9■■□□□ 1.26
DENND3-222ENST00000523530 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
DENND3-222ENST00000523530 KDM2AQ9Y2K7 1162 aa22.9■■□□□ 1.26
DENND3-222ENST00000523530 NBPF8Q3BBV2 869 aa22.89■■□□□ 1.25
DENND3-222ENST00000523530 ZNF326Q5BKZ1 582 aaKnown RBP22.89■■□□□ 1.25
DENND3-222ENST00000523530 UHRF1BP1Q6BDS2 1440 aa22.88■■□□□ 1.25
DENND3-222ENST00000523530 FER1L4A9Z1Z3 1794 aa22.88■■□□□ 1.25
DENND3-222ENST00000523530 ERVK-7P63135 1459 aa22.88■■□□□ 1.25
DENND3-222ENST00000523530 ADGRB3O60242 1522 aa22.86■■□□□ 1.25
DENND3-222ENST00000523530 SPATA31D1Q6ZQQ2 1576 aa22.84■■□□□ 1.25
DENND3-222ENST00000523530 CHGAP10645 457 aaKnown RBP22.84■■□□□ 1.25
DENND3-222ENST00000523530 IFT172Q9UG01 1749 aa22.83■■□□□ 1.25
DENND3-222ENST00000523530 ZMYM3Q14202 1370 aa22.83■■□□□ 1.24
DENND3-222ENST00000523530 FBXO31Q5XUX0 539 aaPredicted RBP22.82■■□□□ 1.24
DENND3-222ENST00000523530 SLC52A1Q9NWF4 448 aa22.81■■□□□ 1.24
DENND3-222ENST00000523530 TRPM1Q7Z4N2 1603 aa22.81■■□□□ 1.24
DENND3-222ENST00000523530 PRAG1Q86YV5 1406 aa22.81■■□□□ 1.24
DENND3-222ENST00000523530 RALGAPBQ86X10 1494 aa22.81■■□□□ 1.24
DENND3-222ENST00000523530 MADDQ8WXG6 1647 aa22.78■■□□□ 1.24
DENND3-222ENST00000523530 MYO5BQ9ULV0 1848 aa22.78■■□□□ 1.24
DENND3-222ENST00000523530 STAC3Q96MF2 364 aa22.78■■□□□ 1.24
DENND3-222ENST00000523530 PPLO60437 1756 aa22.78■■□□□ 1.24
DENND3-222ENST00000523530 IDI1Q13907 227 aa22.77■■□□□ 1.24
DENND3-222ENST00000523530 C3P01024 1663 aa22.77■■□□□ 1.24
DENND3-222ENST00000523530 TMEM131LA2VDJ0 1609 aa22.76■■□□□ 1.23
DENND3-222ENST00000523530 MYOM2P54296 1465 aa22.75■■□□□ 1.23
DENND3-222ENST00000523530 EIF4G2P78344 907 aaKnown RBP eCLIP22.73■■□□□ 1.23
DENND3-222ENST00000523530 RIMS1Q86UR5 1692 aaKnown RBP22.72■■□□□ 1.23
DENND3-222ENST00000523530 RPGRIP1LQ68CZ1 1315 aa22.71■■□□□ 1.23
DENND3-222ENST00000523530 ROCK2O75116 1388 aaKnown RBP22.71■■□□□ 1.23
DENND3-222ENST00000523530 HIRIP3Q9BW71 556 aaPredicted RBP22.71■■□□□ 1.23
DENND3-222ENST00000523530 TNRQ92752 1358 aa22.7■■□□□ 1.22
DENND3-222ENST00000523530 KIAA1210Q9ULL0 1709 aa22.7■■□□□ 1.22
DENND3-222ENST00000523530 ADAMTSL3P82987 1691 aa22.69■■□□□ 1.22
DENND3-222ENST00000523530 LAMC1P11047 1609 aa22.69■■□□□ 1.22
DENND3-222ENST00000523530 NEXMIFQ5QGS0 1516 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms