RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 KHSRPQ92945 711 aaKnown RBP eCLIP6.85□□□□□ -1.318e-7■□□□□ 9
NPM1-210ENST00000523339 TOP2BQ02880 1626 aa6.84□□□□□ -1.31
NPM1-210ENST00000523339 VGFO15240 615 aaPredicted RBP6.84□□□□□ -1.31
NPM1-210ENST00000523339 ZNF710Q8N1W2 664 aa6.84□□□□□ -1.31
NPM1-210ENST00000523339 TEX14Q8IWB6 1497 aa6.84□□□□□ -1.31
NPM1-210ENST00000523339 PTPRGP23470 1445 aa6.84□□□□□ -1.32
NPM1-210ENST00000523339 ADCY10Q96PN6 1610 aa6.83□□□□□ -1.32
NPM1-210ENST00000523339 ERBB3P21860 1342 aa6.83□□□□□ -1.32
NPM1-210ENST00000523339 PLB1Q6P1J6 1458 aa6.83□□□□□ -1.32
NPM1-210ENST00000523339 ASXL2Q76L83 1435 aa6.83□□□□□ -1.32
NPM1-210ENST00000523339 ARID4BQ4LE39 1312 aaPredicted RBP6.82□□□□□ -1.32
NPM1-210ENST00000523339 DOK7Q18PE1 504 aa6.82□□□□□ -1.32
NPM1-210ENST00000523339 ARSIQ5FYB1 569 aa6.81□□□□□ -1.32
NPM1-210ENST00000523339 VARS2Q5ST30 1063 aaKnown RBP6.81□□□□□ -1.32
NPM1-210ENST00000523339 MFRPQ9BY79 579 aa6.81□□□□□ -1.32
NPM1-210ENST00000523339 BCL11BQ9C0K0 894 aaPredicted RBP6.81□□□□□ -1.32
NPM1-210ENST00000523339 CERKQ8TCT0 537 aa6.8□□□□□ -1.32
NPM1-210ENST00000523339 ERICH3Q5RHP9 1530 aa6.8□□□□□ -1.32
NPM1-210ENST00000523339 CARMIL2Q6F5E8 1435 aa6.79□□□□□ -1.32
NPM1-210ENST00000523339 PKD2Q13563 968 aa6.79□□□□□ -1.32
NPM1-210ENST00000523339 ABCC2Q92887 1545 aa6.78□□□□□ -1.32
NPM1-210ENST00000523339 STK24Q9Y6E0 443 aa6.78□□□□□ -1.32
NPM1-210ENST00000523339 COL17A1Q9UMD9 1497 aaPredicted RBP6.78□□□□□ -1.32
NPM1-210ENST00000523339 RUSC2Q8N2Y8 1516 aa6.77□□□□□ -1.33
NPM1-210ENST00000523339 KIF3CO14782 793 aa6.77□□□□□ -1.33
NPM1-210ENST00000523339 RGL2O15211 777 aa6.77□□□□□ -1.33
NPM1-210ENST00000523339 NLRP6P59044 892 aa6.77□□□□□ -1.33
NPM1-210ENST00000523339 ZNF687Q8N1G0 1237 aa6.77□□□□□ -1.33
NPM1-210ENST00000523339 KCNH8Q96L42 1107 aa6.77□□□□□ -1.33
NPM1-210ENST00000523339 TNIKQ9UKE5 1360 aa6.77□□□□□ -1.33
NPM1-210ENST00000523339 PPP1R37O75864 691 aa6.76□□□□□ -1.33
NPM1-210ENST00000523339 HSPA2P54652 639 aa6.76□□□□□ -1.33
NPM1-210ENST00000523339 GLI2P10070 1586 aa6.76□□□□□ -1.33
NPM1-210ENST00000523339 KIAA0586Q9BVV6 1533 aa6.76□□□□□ -1.33
NPM1-210ENST00000523339 C2orf72A6NCS6 295 aa6.75□□□□□ -1.33
NPM1-210ENST00000523339 EPRSP07814 1512 aaKnown RBP6.75□□□□□ -1.33
NPM1-210ENST00000523339 PTPRMP28827 1452 aa6.74□□□□□ -1.33
NPM1-210ENST00000523339 POTEEQ6S8J3 1075 aa6.74□□□□□ -1.33
NPM1-210ENST00000523339 ZSWIM6Q9HCJ5 1215 aa6.74□□□□□ -1.33
NPM1-210ENST00000523339 UACAQ9BZF9 1416 aa6.74□□□□□ -1.33
NPM1-210ENST00000523339 SPATA31D1Q6ZQQ2 1576 aa6.74□□□□□ -1.33
NPM1-210ENST00000523339 STK25O00506 426 aa6.73□□□□□ -1.33
NPM1-210ENST00000523339 RIMBP2O15034 1052 aa6.73□□□□□ -1.33
NPM1-210ENST00000523339 ECM2O94769 699 aaPredicted RBP6.73□□□□□ -1.33
NPM1-210ENST00000523339 FAM9AQ8IZU1 332 aaPredicted RBP6.73□□□□□ -1.33
NPM1-210ENST00000523339 CD109Q6YHK3 1445 aa6.73□□□□□ -1.33
NPM1-210ENST00000523339 PCF11O94913 1555 aaKnown RBP6.73□□□□□ -1.33
NPM1-210ENST00000523339 ZNF316A6NFI3 1004 aaPredicted RBP6.72□□□□□ -1.33
NPM1-210ENST00000523339 PPRC1Q5VV67 1664 aaKnown RBP6.71□□□□□ -1.33
NPM1-210ENST00000523339 KIF21BO75037 1637 aa6.7□□□□□ -1.34
NPM1-210ENST00000523339 NUDT7P0C024 238 aa6.7□□□□□ -1.34
NPM1-210ENST00000523339 CUL7Q14999 1698 aa6.7□□□□□ -1.34
NPM1-210ENST00000523339 MAP3K4Q9Y6R4 1608 aa6.69□□□□□ -1.34
NPM1-210ENST00000523339 UHRF1BP1LA0JNW5 1464 aa6.69□□□□□ -1.34
NPM1-210ENST00000523339 WDR7Q9Y4E6 1490 aa6.69□□□□□ -1.34
NPM1-210ENST00000523339 ANKRD13DQ6ZTN6 518 aa6.69□□□□□ -1.34
NPM1-210ENST00000523339 RNF166Q96A37 237 aaPredicted RBP6.69□□□□□ -1.34
NPM1-210ENST00000523339 SUPT5HO00267 1087 aaKnown RBP6.68□□□□□ -1.34
NPM1-210ENST00000523339 MLECQ14165 292 aa6.68□□□□□ -1.34
NPM1-210ENST00000523339 MYT1LQ9UL68 1186 aa6.68□□□□□ -1.34
NPM1-210ENST00000523339 LHX6Q9UPM6 363 aa6.68□□□□□ -1.34
NPM1-210ENST00000523339 AXIN2Q9Y2T1 843 aa6.68□□□□□ -1.34
NPM1-210ENST00000523339 ARID3CA6NKF2 412 aa6.67□□□□□ -1.34
NPM1-210ENST00000523339 RAPGEF3O95398 923 aa6.67□□□□□ -1.34
NPM1-210ENST00000523339 KIF27Q86VH2 1401 aa6.67□□□□□ -1.34
NPM1-210ENST00000523339 KDM5BQ9UGL1 1544 aa6.66□□□□□ -1.34
NPM1-210ENST00000523339 PCDHGA4Q9Y5G9 962 aa6.66□□□□□ -1.34
NPM1-210ENST00000523339 MAGI3Q5TCQ9 1506 aa6.66□□□□□ -1.34
NPM1-210ENST00000523339 BIVM-ERCC5R4GMW8 1640 aa6.65□□□□□ -1.34
NPM1-210ENST00000523339 POGZQ7Z3K3 1410 aa6.65□□□□□ -1.35
NPM1-210ENST00000523339 ZCCHC11Q5TAX3 1644 aaKnown RBP6.65□□□□□ -1.35
NPM1-210ENST00000523339 SLC34A2O95436 690 aa6.64□□□□□ -1.35
NPM1-210ENST00000523339 IGF1RP08069 1367 aa6.64□□□□□ -1.35
NPM1-210ENST00000523339 CARMIL1Q5VZK9 1371 aa6.64□□□□□ -1.35
NPM1-210ENST00000523339 LSM11P83369 360 aaKnown RBP eCLIP6.63□□□□□ -1.356e-8■■■■■ 28.5
NPM1-210ENST00000523339 IQGAP2Q13576 1575 aa6.63□□□□□ -1.35
NPM1-210ENST00000523339 MADDQ8WXG6 1647 aa6.63□□□□□ -1.35
NPM1-210ENST00000523339 TAOK2Q9UL54 1235 aa6.63□□□□□ -1.35
NPM1-210ENST00000523339 PHLDB1Q86UU1 1377 aa6.62□□□□□ -1.35
NPM1-210ENST00000523339 UBAP1LF5GYI3 381 aa6.62□□□□□ -1.35
NPM1-210ENST00000523339 ADAMTSL3P82987 1691 aa6.61□□□□□ -1.35
NPM1-210ENST00000523339 CFAP43Q8NDM7 1665 aa6.61□□□□□ -1.35
NPM1-210ENST00000523339 ARAP3Q8WWN8 1544 aa6.6□□□□□ -1.35
NPM1-210ENST00000523339 YEATS2Q9ULM3 1422 aa6.6□□□□□ -1.35
NPM1-210ENST00000523339 TMC2Q8TDI7 906 aa6.6□□□□□ -1.35
NPM1-210ENST00000523339 ESF1Q9H501 851 aaKnown RBP6.6□□□□□ -1.35
NPM1-210ENST00000523339 RIMS1Q86UR5 1692 aaKnown RBP6.6□□□□□ -1.35
NPM1-210ENST00000523339 FANCAO15360 1455 aa6.6□□□□□ -1.35
NPM1-210ENST00000523339 DISP1Q96F81 1524 aa6.59□□□□□ -1.35
NPM1-210ENST00000523339 BCORL1Q5H9F3 1711 aa6.59□□□□□ -1.36
NPM1-210ENST00000523339 AKNAQ7Z591 1439 aa6.59□□□□□ -1.36
NPM1-210ENST00000523339 NKX1-1Q15270 411 aaPredicted RBP6.58□□□□□ -1.36
NPM1-210ENST00000523339 PLPP6Q8IY26 295 aa6.58□□□□□ -1.36
NPM1-210ENST00000523339 PTCD2Q8WV60 388 aaKnown RBP6.58□□□□□ -1.36
NPM1-210ENST00000523339 CEBPAP49715 358 aaPredicted RBP6.57□□□□□ -1.36
NPM1-210ENST00000523339 DMRTA1Q5VZB9 504 aa6.57□□□□□ -1.36
NPM1-210ENST00000523339 UHRF1BP1Q6BDS2 1440 aa6.57□□□□□ -1.36
NPM1-210ENST00000523339 PSEN2P49810 448 aa6.56□□□□□ -1.36
NPM1-210ENST00000523339 PIP4K2BP78356 416 aa6.56□□□□□ -1.36
NPM1-210ENST00000523339 FOXK1P85037 733 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms