RNA–Protein interactions for RNA: ENST00000523262.5

CSGALNACT1-213, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-213ENST00000523262 TSPY4P0CV99 314 aa25.28■■□□□ 1.64
CSGALNACT1-213ENST00000523262 TSPY10P0CW01 314 aa25.28■■□□□ 1.64
CSGALNACT1-213ENST00000523262 WASHC2CQ9Y4E1 1318 aa25.28■■□□□ 1.64
CSGALNACT1-213ENST00000523262 TNRQ92752 1358 aa25.26■■□□□ 1.63
CSGALNACT1-213ENST00000523262 FBXO31Q5XUX0 539 aaPredicted RBP25.25■■□□□ 1.63
CSGALNACT1-213ENST00000523262 ILDR2Q71H61 639 aa25.24■■□□□ 1.63
CSGALNACT1-213ENST00000523262 KDM5DQ9BY66 1539 aa25.23■■□□□ 1.63
CSGALNACT1-213ENST00000523262 FAM135AQ9P2D6 1515 aa25.22■■□□□ 1.63
CSGALNACT1-213ENST00000523262 DNMT1P26358 1616 aaKnown RBP25.22■■□□□ 1.63
CSGALNACT1-213ENST00000523262 PZPP20742 1482 aa25.21■■□□□ 1.63
CSGALNACT1-213ENST00000523262 SPATA31D1Q6ZQQ2 1576 aa25.2■■□□□ 1.62
CSGALNACT1-213ENST00000523262 ARHGEF5Q12774 1597 aa25.18■■□□□ 1.62
CSGALNACT1-213ENST00000523262 SOCS7O14512 581 aa25.17■■□□□ 1.62
CSGALNACT1-213ENST00000523262 ANKLE2Q86XL3 938 aa25.17■■□□□ 1.62
CSGALNACT1-213ENST00000523262 THEMISQ8N1K5 641 aaPredicted RBP25.17■■□□□ 1.62
CSGALNACT1-213ENST00000523262 VPS8Q8N3P4 1428 aa25.15■■□□□ 1.62
CSGALNACT1-213ENST00000523262 MIA2Q96PC5 1412 aa25.15■■□□□ 1.62
CSGALNACT1-213ENST00000523262 LRRC9Q6ZRR7 1453 aa25.15■■□□□ 1.62
CSGALNACT1-213ENST00000523262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.13■■□□□ 1.61
CSGALNACT1-213ENST00000523262 NLRP1Q9C000 1473 aa25.12■■□□□ 1.61
CSGALNACT1-213ENST00000523262 SCAF1Q9H7N4 1312 aaKnown RBP25.11■■□□□ 1.61
CSGALNACT1-213ENST00000523262 POLR1AO95602 1720 aaPredicted RBP25.09■■□□□ 1.61
CSGALNACT1-213ENST00000523262 LOC105371045A0A1W2PR82 267 aa25.09■■□□□ 1.61
CSGALNACT1-213ENST00000523262 CPS1P31327 1500 aa25.08■■□□□ 1.61
CSGALNACT1-213ENST00000523262 TOM1O60784 492 aa25.08■■□□□ 1.61
CSGALNACT1-213ENST00000523262 UGGT1Q9NYU2 1555 aa25.08■■□□□ 1.61
CSGALNACT1-213ENST00000523262 SHANK2Q9UPX8 1470 aa25.08■■□□□ 1.6
CSGALNACT1-213ENST00000523262 NEURL4Q96JN8 1562 aa25.07■■□□□ 1.6
CSGALNACT1-213ENST00000523262 PIP4K2BP78356 416 aa25.05■■□□□ 1.6
CSGALNACT1-213ENST00000523262 KANK4Q5T7N3 995 aaPredicted RBP25.05■■□□□ 1.6
CSGALNACT1-213ENST00000523262 MAST1Q9Y2H9 1570 aa25.05■■□□□ 1.6
CSGALNACT1-213ENST00000523262 NPHP4O75161 1426 aaPredicted RBP25.03■■□□□ 1.6
CSGALNACT1-213ENST00000523262 MYOM3Q5VTT5 1437 aa25.03■■□□□ 1.6
CSGALNACT1-213ENST00000523262 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
CSGALNACT1-213ENST00000523262 RNF17Q9BXT8 1623 aaKnown RBP25.02■■□□□ 1.6
CSGALNACT1-213ENST00000523262 ABCC3O15438 1527 aa25.02■■□□□ 1.6
CSGALNACT1-213ENST00000523262 MED14O60244 1454 aa25■■□□□ 1.59
CSGALNACT1-213ENST00000523262 ZC3H13Q5T200 1668 aaKnown RBP25■■□□□ 1.59
CSGALNACT1-213ENST00000523262 EIF2AK4Q9P2K8 1649 aaKnown RBP24.99■■□□□ 1.59
CSGALNACT1-213ENST00000523262 DEPDC5O75140 1603 aa24.98■■□□□ 1.59
CSGALNACT1-213ENST00000523262 HSPA1LP34931 641 aa24.98■■□□□ 1.59
CSGALNACT1-213ENST00000523262 APLP2Q06481 763 aa24.97■■□□□ 1.59
CSGALNACT1-213ENST00000523262 ERVK-7P63135 1459 aa24.96■■□□□ 1.59
CSGALNACT1-213ENST00000523262 VWDEQ8N2E2 1590 aa24.96■■□□□ 1.59
CSGALNACT1-213ENST00000523262 DUOX2Q9NRD8 1548 aa24.96■■□□□ 1.59
CSGALNACT1-213ENST00000523262 KIF15Q9NS87 1388 aa24.93■■□□□ 1.58
CSGALNACT1-213ENST00000523262 IQGAP1P46940 1657 aa24.92■■□□□ 1.58
CSGALNACT1-213ENST00000523262 RRP7BPQ9NSQ0 103 aa24.91■■□□□ 1.58
CSGALNACT1-213ENST00000523262 MROH1Q8NDA8 1641 aa24.9■■□□□ 1.58
CSGALNACT1-213ENST00000523262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.88■■□□□ 1.57
CSGALNACT1-213ENST00000523262 CEP152O94986 1710 aa24.88■■□□□ 1.57
CSGALNACT1-213ENST00000523262 ERBINQ96RT1 1412 aa24.87■■□□□ 1.57
CSGALNACT1-213ENST00000523262 ABCC5O15440 1437 aa24.86■■□□□ 1.57
CSGALNACT1-213ENST00000523262 KANK1Q14678 1352 aa24.85■■□□□ 1.57
CSGALNACT1-213ENST00000523262 TXNDC2Q86VQ3 553 aa24.85■■□□□ 1.57
CSGALNACT1-213ENST00000523262 EID1Q9Y6B2 187 aa24.85■■□□□ 1.57
CSGALNACT1-213ENST00000523262 ARHGAP31Q2M1Z3 1444 aa24.85■■□□□ 1.57
CSGALNACT1-213ENST00000523262 CFAP65Q6ZU64 1925 aaKnown RBP24.84■■□□□ 1.57
CSGALNACT1-213ENST00000523262 SCAF11Q99590 1463 aaKnown RBP24.84■■□□□ 1.57
CSGALNACT1-213ENST00000523262 STAG3Q9UJ98 1225 aa24.83■■□□□ 1.57
CSGALNACT1-213ENST00000523262 PTPN23Q9H3S7 1636 aa24.83■■□□□ 1.56
CSGALNACT1-213ENST00000523262 PRDM15P57071 1507 aaPredicted RBP24.82■■□□□ 1.56
CSGALNACT1-213ENST00000523262 LRRC7Q96NW7 1537 aa24.82■■□□□ 1.56
CSGALNACT1-213ENST00000523262 UBR1Q8IWV7 1749 aa24.82■■□□□ 1.56
CSGALNACT1-213ENST00000523262 MED1Q15648 1581 aaPredicted RBP24.81■■□□□ 1.56
CSGALNACT1-213ENST00000523262 DAPK1P53355 1430 aa24.81■■□□□ 1.56
CSGALNACT1-213ENST00000523262 LTKP29376 864 aa24.81■■□□□ 1.56
CSGALNACT1-213ENST00000523262 PHF23Q9BUL5 403 aaPredicted RBP24.79■■□□□ 1.56
CSGALNACT1-213ENST00000523262 SENP3Q9H4L4 574 aaPredicted RBP24.79■■□□□ 1.56
CSGALNACT1-213ENST00000523262 SYNMO15061 1565 aa24.79■■□□□ 1.56
CSGALNACT1-213ENST00000523262 ANKRD30AQ9BXX3 1397 aa24.79■■□□□ 1.56
CSGALNACT1-213ENST00000523262 CROCC2H7BZ55 1655 aa24.78■■□□□ 1.56
CSGALNACT1-213ENST00000523262 CHIC2Q9UKJ5 165 aa24.78■■□□□ 1.56
CSGALNACT1-213ENST00000523262 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
CSGALNACT1-213ENST00000523262 ARHGAP23Q9P227 1491 aa24.77■■□□□ 1.56
CSGALNACT1-213ENST00000523262 SLIT1O75093 1534 aa24.77■■□□□ 1.56
CSGALNACT1-213ENST00000523262 STRCP1A6NGW2 1772 aa24.76■■□□□ 1.55
CSGALNACT1-213ENST00000523262 ALKQ9UM73 1620 aa24.75■■□□□ 1.55
CSGALNACT1-213ENST00000523262 TMEM2Q9UHN6 1383 aa24.73■■□□□ 1.55
CSGALNACT1-213ENST00000523262 IDI1Q13907 227 aa24.7■■□□□ 1.54
CSGALNACT1-213ENST00000523262 PIK3C2BO00750 1634 aa24.7■■□□□ 1.54
CSGALNACT1-213ENST00000523262 LMTK2Q8IWU2 1503 aa24.68■■□□□ 1.54
CSGALNACT1-213ENST00000523262 EFCAB6Q5THR3 1501 aa24.67■■□□□ 1.54
CSGALNACT1-213ENST00000523262 FAM50AQ14320 339 aaKnown RBP24.65■■□□□ 1.54
CSGALNACT1-213ENST00000523262 BCANQ96GW7 911 aa24.63■■□□□ 1.53
CSGALNACT1-213ENST00000523262 SLC52A1Q9NWF4 448 aa24.63■■□□□ 1.53
CSGALNACT1-213ENST00000523262 KCNA6P17658 529 aa24.62■■□□□ 1.53
CSGALNACT1-213ENST00000523262 SLC26A8Q96RN1 970 aa24.62■■□□□ 1.53
CSGALNACT1-213ENST00000523262 KDM5AP29375 1690 aaKnown RBP24.62■■□□□ 1.53
CSGALNACT1-213ENST00000523262 NOS1P29475 1434 aa24.61■■□□□ 1.53
CSGALNACT1-213ENST00000523262 TMEM94Q12767 1356 aa24.6■■□□□ 1.53
CSGALNACT1-213ENST00000523262 PROSER2Q86WR7 435 aaPredicted RBP24.6■■□□□ 1.53
CSGALNACT1-213ENST00000523262 ADGRL2O95490 1459 aa24.59■■□□□ 1.53
CSGALNACT1-213ENST00000523262 FAM135BQ49AJ0 1406 aa24.57■■□□□ 1.52
CSGALNACT1-213ENST00000523262 ANKRD50Q9ULJ7 1429 aa24.57■■□□□ 1.52
CSGALNACT1-213ENST00000523262 ADGRB3O60242 1522 aa24.56■■□□□ 1.52
CSGALNACT1-213ENST00000523262 HDGFP51858 240 aaKnown RBP24.55■■□□□ 1.52
CSGALNACT1-213ENST00000523262 XIRP1Q702N8 1843 aaKnown RBP24.55■■□□□ 1.52
CSGALNACT1-213ENST00000523262 RPRD2Q5VT52 1461 aaKnown RBP24.54■■□□□ 1.52
CSGALNACT1-213ENST00000523262 TET3O43151 1660 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms