RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 TCOF1Q13428 1488 aaKnown RBP25.28■■□□□ 1.64
CLN8-206ENST00000523237 SHANK2Q9UPX8 1470 aa25.28■■□□□ 1.64
CLN8-206ENST00000523237 DMRT2Q9Y5R5 561 aa25.27■■□□□ 1.64
CLN8-206ENST00000523237 RNF17Q9BXT8 1623 aaKnown RBP25.26■■□□□ 1.63
CLN8-206ENST00000523237 ZNF142P52746 1687 aaPredicted RBP25.26■■□□□ 1.63
CLN8-206ENST00000523237 WASHC2CQ9Y4E1 1318 aa25.26■■□□□ 1.63
CLN8-206ENST00000523237 DNMT1P26358 1616 aaKnown RBP25.26■■□□□ 1.63
CLN8-206ENST00000523237 ABCC5O15440 1437 aa25.25■■□□□ 1.63
CLN8-206ENST00000523237 DUOX2Q9NRD8 1548 aa25.24■■□□□ 1.63
CLN8-206ENST00000523237 DAPK1P53355 1430 aa25.23■■□□□ 1.63
CLN8-206ENST00000523237 CAMSAP1Q5T5Y3 1602 aa25.22■■□□□ 1.63
CLN8-206ENST00000523237 CEP170BQ9Y4F5 1589 aaPredicted RBP25.22■■□□□ 1.63
CLN8-206ENST00000523237 ZC3H13Q5T200 1668 aaKnown RBP25.21■■□□□ 1.63
CLN8-206ENST00000523237 PZPP20742 1482 aa25.21■■□□□ 1.63
CLN8-206ENST00000523237 NCOA1Q15788 1441 aa25.2■■□□□ 1.63
CLN8-206ENST00000523237 KIF15Q9NS87 1388 aa25.19■■□□□ 1.62
CLN8-206ENST00000523237 FBXO41Q8TF61 875 aa25.18■■□□□ 1.62
CLN8-206ENST00000523237 PTPRTO14522 1441 aa25.18■■□□□ 1.62
CLN8-206ENST00000523237 MROH1Q8NDA8 1641 aa25.15■■□□□ 1.62
CLN8-206ENST00000523237 ERBINQ96RT1 1412 aa25.15■■□□□ 1.62
CLN8-206ENST00000523237 RRP7BPQ9NSQ0 103 aa25.15■■□□□ 1.62
CLN8-206ENST00000523237 ABCC3O15438 1527 aa25.15■■□□□ 1.62
CLN8-206ENST00000523237 TNRQ92752 1358 aa25.15■■□□□ 1.62
CLN8-206ENST00000523237 A2ML1A8K2U0 1454 aa25.15■■□□□ 1.62
CLN8-206ENST00000523237 FBXO31Q5XUX0 539 aaPredicted RBP25.14■■□□□ 1.62
CLN8-206ENST00000523237 PLA2R1Q13018 1463 aa25.14■■□□□ 1.61
CLN8-206ENST00000523237 CEP152O94986 1710 aa25.12■■□□□ 1.61
CLN8-206ENST00000523237 ANKRD30AQ9BXX3 1397 aa25.12■■□□□ 1.61
CLN8-206ENST00000523237 FAM50AQ14320 339 aaKnown RBP25.1■■□□□ 1.61
CLN8-206ENST00000523237 CERKQ8TCT0 537 aa25.1■■□□□ 1.61
CLN8-206ENST00000523237 CHIC2Q9UKJ5 165 aa25.1■■□□□ 1.61
CLN8-206ENST00000523237 PRDM15P57071 1507 aaPredicted RBP25.09■■□□□ 1.61
CLN8-206ENST00000523237 PKD2Q13563 968 aa25.07■■□□□ 1.6
CLN8-206ENST00000523237 DEPDC5O75140 1603 aa25.07■■□□□ 1.6
CLN8-206ENST00000523237 NCKAP5LQ9HCH0 1330 aa25.07■■□□□ 1.6
CLN8-206ENST00000523237 NLRP1Q9C000 1473 aa25.06■■□□□ 1.6
CLN8-206ENST00000523237 ADGRL2O95490 1459 aa25.05■■□□□ 1.6
CLN8-206ENST00000523237 SPATA31D1Q6ZQQ2 1576 aa25.05■■□□□ 1.6
CLN8-206ENST00000523237 CFAP65Q6ZU64 1925 aaKnown RBP25.04■■□□□ 1.6
CLN8-206ENST00000523237 ERVK-7P63135 1459 aa25.02■■□□□ 1.6
CLN8-206ENST00000523237 POLR1AO95602 1720 aaPredicted RBP25.02■■□□□ 1.6
CLN8-206ENST00000523237 KANK1Q14678 1352 aa25.01■■□□□ 1.59
CLN8-206ENST00000523237 UGGT1Q9NYU2 1555 aa25.01■■□□□ 1.59
CLN8-206ENST00000523237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25■■□□□ 1.59
CLN8-206ENST00000523237 ARHGAP31Q2M1Z3 1444 aa24.98■■□□□ 1.59
CLN8-206ENST00000523237 LTBP4Q8N2S1 1624 aa24.97■■□□□ 1.59
CLN8-206ENST00000523237 THEMISQ8N1K5 641 aaPredicted RBP24.97■■□□□ 1.59
CLN8-206ENST00000523237 VWDEQ8N2E2 1590 aa24.95■■□□□ 1.58
CLN8-206ENST00000523237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.94■■□□□ 1.58
CLN8-206ENST00000523237 LMTK2Q8IWU2 1503 aa24.94■■□□□ 1.58
CLN8-206ENST00000523237 PPARGC1BQ86YN6 1023 aaKnown RBP24.93■■□□□ 1.58
CLN8-206ENST00000523237 ANKRD50Q9ULJ7 1429 aa24.93■■□□□ 1.58
CLN8-206ENST00000523237 NEURL4Q96JN8 1562 aa24.93■■□□□ 1.58
CLN8-206ENST00000523237 ANKLE2Q86XL3 938 aa24.91■■□□□ 1.58
CLN8-206ENST00000523237 UBR1Q8IWV7 1749 aa24.89■■□□□ 1.58
CLN8-206ENST00000523237 ZNF335Q9H4Z2 1342 aaPredicted RBP24.89■■□□□ 1.58
CLN8-206ENST00000523237 IQSEC2Q5JU85 1478 aa24.89■■□□□ 1.57
CLN8-206ENST00000523237 EFCAB6Q5THR3 1501 aa24.87■■□□□ 1.57
CLN8-206ENST00000523237 ROCK1Q13464 1354 aa24.87■■□□□ 1.57
CLN8-206ENST00000523237 MED14O60244 1454 aa24.84■■□□□ 1.57
CLN8-206ENST00000523237 IQGAP1P46940 1657 aa24.83■■□□□ 1.57
CLN8-206ENST00000523237 NPHP4O75161 1426 aaPredicted RBP24.83■■□□□ 1.57
CLN8-206ENST00000523237 UNC13BO14795 1591 aa24.82■■□□□ 1.56
CLN8-206ENST00000523237 PIK3C2BO00750 1634 aa24.82■■□□□ 1.56
CLN8-206ENST00000523237 ITGAEP38570 1179 aa24.81■■□□□ 1.56
CLN8-206ENST00000523237 TET3O43151 1660 aa24.81■■□□□ 1.56
CLN8-206ENST00000523237 KDM5AP29375 1690 aaKnown RBP24.8■■□□□ 1.56
CLN8-206ENST00000523237 SYNMO15061 1565 aa24.79■■□□□ 1.56
CLN8-206ENST00000523237 GCC2Q8IWJ2 1684 aa24.78■■□□□ 1.56
CLN8-206ENST00000523237 RPRD2Q5VT52 1461 aaKnown RBP24.78■■□□□ 1.56
CLN8-206ENST00000523237 NOS1P29475 1434 aa24.78■■□□□ 1.56
CLN8-206ENST00000523237 SLIT1O75093 1534 aa24.77■■□□□ 1.56
CLN8-206ENST00000523237 ARHGAP23Q9P227 1491 aa24.77■■□□□ 1.56
CLN8-206ENST00000523237 STAG3Q9UJ98 1225 aa24.76■■□□□ 1.55
CLN8-206ENST00000523237 SCAF11Q99590 1463 aaKnown RBP24.76■■□□□ 1.55
CLN8-206ENST00000523237 CPS1P31327 1500 aa24.76■■□□□ 1.55
CLN8-206ENST00000523237 RRBP1Q9P2E9 1410 aaKnown RBP24.75■■□□□ 1.55
CLN8-206ENST00000523237 IDI1Q13907 227 aa24.74■■□□□ 1.55
CLN8-206ENST00000523237 IQGAP3Q86VI3 1631 aa24.73■■□□□ 1.55
CLN8-206ENST00000523237 TXNDC2Q86VQ3 553 aa24.71■■□□□ 1.55
CLN8-206ENST00000523237 SLC52A1Q9NWF4 448 aa24.71■■□□□ 1.55
CLN8-206ENST00000523237 EID1Q9Y6B2 187 aa24.71■■□□□ 1.55
CLN8-206ENST00000523237 TMEM2Q9UHN6 1383 aa24.7■■□□□ 1.55
CLN8-206ENST00000523237 ADGRB3O60242 1522 aa24.7■■□□□ 1.54
CLN8-206ENST00000523237 E9PCH4 1651 aa24.69■■□□□ 1.54
CLN8-206ENST00000523237 LTKP29376 864 aa24.69■■□□□ 1.54
CLN8-206ENST00000523237 NUP155O75694 1391 aa24.66■■□□□ 1.54
CLN8-206ENST00000523237 UBAP1LF5GYI3 381 aa24.65■■□□□ 1.54
CLN8-206ENST00000523237 STRCP1A6NGW2 1772 aa24.64■■□□□ 1.53
CLN8-206ENST00000523237 MYO5BQ9ULV0 1848 aa24.63■■□□□ 1.53
CLN8-206ENST00000523237 TMEM131LA2VDJ0 1609 aa24.59■■□□□ 1.53
CLN8-206ENST00000523237 NAIPQ13075 1403 aa24.57■■□□□ 1.52
CLN8-206ENST00000523237 LRRC7Q96NW7 1537 aa24.56■■□□□ 1.52
CLN8-206ENST00000523237 TOM1O60784 492 aa24.55■■□□□ 1.52
CLN8-206ENST00000523237 SPHKAPQ2M3C7 1700 aa24.53■■□□□ 1.52
CLN8-206ENST00000523237 ZFYVE9O95405 1425 aa24.52■■□□□ 1.52
CLN8-206ENST00000523237 CHGAP10645 457 aaKnown RBP24.52■■□□□ 1.52
CLN8-206ENST00000523237 HDGFP51858 240 aaKnown RBP24.52■■□□□ 1.52
CLN8-206ENST00000523237 HFM1A2PYH4 1435 aa24.52■■□□□ 1.52
CLN8-206ENST00000523237 RIMS2Q9UQ26 1411 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms