RNA–Protein interactions for RNA: ENST00000523227.5

CSGALNACT1-212, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-212ENST00000523227 RTEL1-TNFRSF6BF6WH68 1400 aa10.06□□□□□ -0.8
CSGALNACT1-212ENST00000523227 PKD2Q13563 968 aa10.05□□□□□ -0.8
CSGALNACT1-212ENST00000523227 ZNF644Q9H582 1327 aaPredicted RBP10.05□□□□□ -0.8
CSGALNACT1-212ENST00000523227 CAMSAP2Q08AD1 1489 aa10.04□□□□□ -0.8
CSGALNACT1-212ENST00000523227 NPATQ14207 1427 aa10.04□□□□□ -0.8
CSGALNACT1-212ENST00000523227 CCDC141Q6ZP82 1450 aa10.04□□□□□ -0.8
CSGALNACT1-212ENST00000523227 SLC4A2P04920 1241 aa10.03□□□□□ -0.8
CSGALNACT1-212ENST00000523227 ARHGEF5Q12774 1597 aa10.03□□□□□ -0.8
CSGALNACT1-212ENST00000523227 SPATA31D1Q6ZQQ2 1576 aa10.02□□□□□ -0.81
CSGALNACT1-212ENST00000523227 ZMYM3Q14202 1370 aa10.01□□□□□ -0.81
CSGALNACT1-212ENST00000523227 NCOA1Q15788 1441 aa10.01□□□□□ -0.81
CSGALNACT1-212ENST00000523227 UBAP1LF5GYI3 381 aa10.01□□□□□ -0.81
CSGALNACT1-212ENST00000523227 CLTCQ00610 1675 aaKnown RBP10.01□□□□□ -0.81
CSGALNACT1-212ENST00000523227 DHX29Q7Z478 1369 aaKnown RBP10.01□□□□□ -0.81
CSGALNACT1-212ENST00000523227 MIA2Q96PC5 1412 aa10□□□□□ -0.81
CSGALNACT1-212ENST00000523227 APLP2Q06481 763 aa10□□□□□ -0.81
CSGALNACT1-212ENST00000523227 LTBP4Q8N2S1 1624 aa10□□□□□ -0.81
CSGALNACT1-212ENST00000523227 MYOM3Q5VTT5 1437 aa9.99□□□□□ -0.81
CSGALNACT1-212ENST00000523227 FAM135AQ9P2D6 1515 aa9.99□□□□□ -0.81
CSGALNACT1-212ENST00000523227 TSPY4P0CV99 314 aa9.99□□□□□ -0.81
CSGALNACT1-212ENST00000523227 TSPY10P0CW01 314 aa9.99□□□□□ -0.81
CSGALNACT1-212ENST00000523227 KANK4Q5T7N3 995 aaPredicted RBP9.99□□□□□ -0.81
CSGALNACT1-212ENST00000523227 GGT6Q6P531 493 aa9.99□□□□□ -0.81
CSGALNACT1-212ENST00000523227 MAST1Q9Y2H9 1570 aa9.98□□□□□ -0.81
CSGALNACT1-212ENST00000523227 CAMSAP1Q5T5Y3 1602 aa9.98□□□□□ -0.81
CSGALNACT1-212ENST00000523227 TOM1O60784 492 aa9.98□□□□□ -0.81
CSGALNACT1-212ENST00000523227 NCKAP5LQ9HCH0 1330 aa9.97□□□□□ -0.81
CSGALNACT1-212ENST00000523227 PLA2R1Q13018 1463 aa9.96□□□□□ -0.82
CSGALNACT1-212ENST00000523227 ZNF142P52746 1687 aaPredicted RBP9.96□□□□□ -0.82
CSGALNACT1-212ENST00000523227 KIF3BO15066 747 aa9.95□□□□□ -0.82
CSGALNACT1-212ENST00000523227 PTPRKQ15262 1439 aa9.95□□□□□ -0.82
CSGALNACT1-212ENST00000523227 KDM5DQ9BY66 1539 aa9.95□□□□□ -0.82
CSGALNACT1-212ENST00000523227 MYO3AQ8NEV4 1616 aa9.95□□□□□ -0.82
CSGALNACT1-212ENST00000523227 EIF2AK4Q9P2K8 1649 aaKnown RBP9.94□□□□□ -0.82
CSGALNACT1-212ENST00000523227 RNF17Q9BXT8 1623 aaKnown RBP9.93□□□□□ -0.82
CSGALNACT1-212ENST00000523227 PTPN23Q9H3S7 1636 aa9.93□□□□□ -0.82
CSGALNACT1-212ENST00000523227 CEP170BQ9Y4F5 1589 aaPredicted RBP9.93□□□□□ -0.82
CSGALNACT1-212ENST00000523227 ZNF335Q9H4Z2 1342 aaPredicted RBP9.93□□□□□ -0.82
CSGALNACT1-212ENST00000523227 RTN4Q9NQC3 1192 aaKnown RBP9.93□□□□□ -0.82
CSGALNACT1-212ENST00000523227 CROCC2H7BZ55 1655 aa9.93□□□□□ -0.82
CSGALNACT1-212ENST00000523227 ZC3H13Q5T200 1668 aaKnown RBP9.93□□□□□ -0.82
CSGALNACT1-212ENST00000523227 SHANK2Q9UPX8 1470 aa9.92□□□□□ -0.82
CSGALNACT1-212ENST00000523227 WASHC2CQ9Y4E1 1318 aa9.92□□□□□ -0.82
CSGALNACT1-212ENST00000523227 ANKLE2Q86XL3 938 aa9.92□□□□□ -0.82
CSGALNACT1-212ENST00000523227 THEMISQ8N1K5 641 aaPredicted RBP9.92□□□□□ -0.82
CSGALNACT1-212ENST00000523227 PZPP20742 1482 aa9.91□□□□□ -0.82
CSGALNACT1-212ENST00000523227 MYCNP04198 464 aaPredicted RBP9.91□□□□□ -0.82
CSGALNACT1-212ENST00000523227 ATXN8OSP0DMR3 200 aa9.91□□□□□ -0.82
CSGALNACT1-212ENST00000523227 AMER1Q5JTC6 1135 aaPredicted RBP9.91□□□□□ -0.82
CSGALNACT1-212ENST00000523227 DUOX2Q9NRD8 1548 aa9.91□□□□□ -0.82
CSGALNACT1-212ENST00000523227 TCOF1Q13428 1488 aaKnown RBP9.91□□□□□ -0.82
CSGALNACT1-212ENST00000523227 FGD6Q6ZV73 1430 aa9.9□□□□□ -0.82
CSGALNACT1-212ENST00000523227 DNMT1P26358 1616 aaKnown RBP9.9□□□□□ -0.82
CSGALNACT1-212ENST00000523227 A2ML1A8K2U0 1454 aa9.9□□□□□ -0.83
CSGALNACT1-212ENST00000523227 CPS1P31327 1500 aa9.89□□□□□ -0.83
CSGALNACT1-212ENST00000523227 PIP4K2BP78356 416 aa9.89□□□□□ -0.83
CSGALNACT1-212ENST00000523227 ABCC5O15440 1437 aa9.89□□□□□ -0.83
CSGALNACT1-212ENST00000523227 DAPK1P53355 1430 aa9.89□□□□□ -0.83
CSGALNACT1-212ENST00000523227 TNRQ92752 1358 aa9.88□□□□□ -0.83
CSGALNACT1-212ENST00000523227 ABCC3O15438 1527 aa9.88□□□□□ -0.83
CSGALNACT1-212ENST00000523227 ERBINQ96RT1 1412 aa9.88□□□□□ -0.83
CSGALNACT1-212ENST00000523227 KIF15Q9NS87 1388 aa9.88□□□□□ -0.83
CSGALNACT1-212ENST00000523227 NLRP1Q9C000 1473 aa9.87□□□□□ -0.83
CSGALNACT1-212ENST00000523227 MROH1Q8NDA8 1641 aa9.87□□□□□ -0.83
CSGALNACT1-212ENST00000523227 HSPA1LP34931 641 aa9.87□□□□□ -0.83
CSGALNACT1-212ENST00000523227 SLC24A1O60721 1099 aa9.86□□□□□ -0.83
CSGALNACT1-212ENST00000523227 CEP152O94986 1710 aa9.86□□□□□ -0.83
CSGALNACT1-212ENST00000523227 POLR1AO95602 1720 aaPredicted RBP9.86□□□□□ -0.83
CSGALNACT1-212ENST00000523227 FBXO31Q5XUX0 539 aaPredicted RBP9.86□□□□□ -0.83
CSGALNACT1-212ENST00000523227 PRDM15P57071 1507 aaPredicted RBP9.86□□□□□ -0.83
CSGALNACT1-212ENST00000523227 ANKRD30AQ9BXX3 1397 aa9.86□□□□□ -0.83
CSGALNACT1-212ENST00000523227 DEPDC5O75140 1603 aa9.85□□□□□ -0.83
CSGALNACT1-212ENST00000523227 RRP7BPQ9NSQ0 103 aa9.84□□□□□ -0.83
CSGALNACT1-212ENST00000523227 UGGT1Q9NYU2 1555 aa9.84□□□□□ -0.83
CSGALNACT1-212ENST00000523227 KANK1Q14678 1352 aa9.83□□□□□ -0.84
CSGALNACT1-212ENST00000523227 ADGRL2O95490 1459 aa9.83□□□□□ -0.84
CSGALNACT1-212ENST00000523227 ERVK-7P63135 1459 aa9.83□□□□□ -0.84
CSGALNACT1-212ENST00000523227 ARHGAP31Q2M1Z3 1444 aa9.82□□□□□ -0.84
CSGALNACT1-212ENST00000523227 FKBP8Q14318 412 aa9.82□□□□□ -0.84
CSGALNACT1-212ENST00000523227 NEURL4Q96JN8 1562 aa9.81□□□□□ -0.84
CSGALNACT1-212ENST00000523227 FAM50AQ14320 339 aaKnown RBP9.81□□□□□ -0.84
CSGALNACT1-212ENST00000523227 CHIC2Q9UKJ5 165 aa9.81□□□□□ -0.84
CSGALNACT1-212ENST00000523227 CFAP65Q6ZU64 1925 aaKnown RBP9.81□□□□□ -0.84
CSGALNACT1-212ENST00000523227 MED1Q15648 1581 aaPredicted RBP9.8□□□□□ -0.84
CSGALNACT1-212ENST00000523227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.8□□□□□ -0.84
CSGALNACT1-212ENST00000523227 LMTK2Q8IWU2 1503 aa9.8□□□□□ -0.84
CSGALNACT1-212ENST00000523227 NPHP4O75161 1426 aaPredicted RBP9.8□□□□□ -0.84
CSGALNACT1-212ENST00000523227 VWDEQ8N2E2 1590 aa9.8□□□□□ -0.84
CSGALNACT1-212ENST00000523227 MED14O60244 1454 aa9.79□□□□□ -0.84
CSGALNACT1-212ENST00000523227 UBR1Q8IWV7 1749 aa9.79□□□□□ -0.84
CSGALNACT1-212ENST00000523227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.78□□□□□ -0.84
CSGALNACT1-212ENST00000523227 KDM5AP29375 1690 aaKnown RBP9.77□□□□□ -0.84
CSGALNACT1-212ENST00000523227 IQGAP1P46940 1657 aa9.77□□□□□ -0.84
CSGALNACT1-212ENST00000523227 ANKRD50Q9ULJ7 1429 aa9.77□□□□□ -0.85
CSGALNACT1-212ENST00000523227 EID1Q9Y6B2 187 aa9.77□□□□□ -0.85
CSGALNACT1-212ENST00000523227 EFCAB6Q5THR3 1501 aa9.77□□□□□ -0.85
CSGALNACT1-212ENST00000523227 ROCK1Q13464 1354 aa9.75□□□□□ -0.85
CSGALNACT1-212ENST00000523227 RPRD2Q5VT52 1461 aaKnown RBP9.75□□□□□ -0.85
CSGALNACT1-212ENST00000523227 SLIT1O75093 1534 aa9.75□□□□□ -0.85
CSGALNACT1-212ENST00000523227 PIK3C2BO00750 1634 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms